RNA–Protein interactions for RNA: ENST00000309041.11

CEP290-201, Transcript of centrosomal protein 290, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CEP290, Length 7,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-201ENST00000309041 LINC00167Q96N53 147 aa0.69□□□□□ -2.3
CEP290-201ENST00000309041 CST9LQ9H4G1 147 aa0.69□□□□□ -2.3
CEP290-201ENST00000309041 LINC00472Q9H8W2 130 aa0.69□□□□□ -2.3
CEP290-201ENST00000309041 FBN3Q75N90 2809 aa0.69□□□□□ -2.3
CEP290-201ENST00000309041 HEATR5BQ9P2D3 2071 aa0.69□□□□□ -2.3
CEP290-201ENST00000309041 TRBV6-6A0A0A6YYG2 114 aa0.69□□□□□ -2.3
CEP290-201ENST00000309041 TRBV6-8A0A0A6YYG3 113 aa0.69□□□□□ -2.3
CEP290-201ENST00000309041 TRAV12-3A0A0B4J271 114 aa0.69□□□□□ -2.3
CEP290-201ENST00000309041 FOXS1O43638 330 aa0.69□□□□□ -2.3
CEP290-201ENST00000309041 KRTAP27-1Q3LI81 207 aa0.69□□□□□ -2.3
CEP290-201ENST00000309041 NTM-AS1Q6ZSK4 140 aa0.69□□□□□ -2.3
CEP290-201ENST00000309041 Q8NFD4 153 aa0.69□□□□□ -2.3
CEP290-201ENST00000309041 SND1-IT1Q9HBX3 110 aa0.69□□□□□ -2.3
CEP290-201ENST00000309041 MANBALQ9NQG1 85 aa0.69□□□□□ -2.3
CEP290-201ENST00000309041 LINC01558Q9Y6Z2 57 aa0.69□□□□□ -2.3
CEP290-201ENST00000309041 ALPK2Q86TB3 2170 aa0.69□□□□□ -2.3
CEP290-201ENST00000309041 IGKV2D-26A0A0A0MRZ7 120 aa0.69□□□□□ -2.3
CEP290-201ENST00000309041 C20orf166-AS1Q96NR2 134 aa0.69□□□□□ -2.3
CEP290-201ENST00000309041 PTPRQQ9UMZ3 2332 aa0.69□□□□□ -2.3
CEP290-201ENST00000309041 TSHBP01222 138 aa0.69□□□□□ -2.3
CEP290-201ENST00000309041 RNASE4P34096 147 aaKnown RBP0.69□□□□□ -2.3
CEP290-201ENST00000309041 ADMP35318 185 aa0.69□□□□□ -2.3
CEP290-201ENST00000309041 ROMO1P60602 79 aa0.69□□□□□ -2.3
CEP290-201ENST00000309041 SPINK9Q5DT21 86 aa0.69□□□□□ -2.3
CEP290-201ENST00000309041 C9orf153Q5TBE3 101 aa0.69□□□□□ -2.3
CEP290-201ENST00000309041 CHD5Q8TDI0 1954 aa0.69□□□□□ -2.3
CEP290-201ENST00000309041 NOTCH2Q04721 2471 aa0.69□□□□□ -2.3
CEP290-201ENST00000309041 IGHV1-18A0A0C4DH31 117 aa0.69□□□□□ -2.3
CEP290-201ENST00000309041 A0A1B0GVX0 72 aa0.69□□□□□ -2.3
CEP290-201ENST00000309041 KRTAP24-1Q3LI83 254 aa0.69□□□□□ -2.3
CEP290-201ENST00000309041 Q6ZQT0 140 aa0.69□□□□□ -2.3
CEP290-201ENST00000309041 CYP2G1PQ6ZSU1 146 aa0.69□□□□□ -2.3
CEP290-201ENST00000309041 LITAFQ99732 161 aa0.69□□□□□ -2.3
CEP290-201ENST00000309041 GLIPR2Q9H4G4 154 aa0.69□□□□□ -2.3
CEP290-201ENST00000309041 EML6Q6ZMW3 1958 aa0.69□□□□□ -2.3
CEP290-201ENST00000309041 UNC79Q9P2D8 2635 aa0.69□□□□□ -2.3
CEP290-201ENST00000309041 A0A1B0GUT8 65 aa0.69□□□□□ -2.3
CEP290-201ENST00000309041 A0A1B0GVT2 93 aa0.69□□□□□ -2.3
CEP290-201ENST00000309041 A0A1B0GXF2 115 aa0.69□□□□□ -2.3
CEP290-201ENST00000309041 PRB1P04280 392 aa0.69□□□□□ -2.3
CEP290-201ENST00000309041 RPS21P63220 83 aaKnown RBP0.69□□□□□ -2.3
CEP290-201ENST00000309041 LCE1EQ5T753 118 aa0.69□□□□□ -2.3
CEP290-201ENST00000309041 ZNF75AQ96N20 296 aa0.69□□□□□ -2.3
CEP290-201ENST00000309041 LINC00052Q96N35 136 aa0.69□□□□□ -2.3
CEP290-201ENST00000309041 UBL5Q9BZL1 73 aa0.69□□□□□ -2.3
CEP290-201ENST00000309041 SLIRPQ9GZT3 109 aaKnown RBP0.69□□□□□ -2.3
CEP290-201ENST00000309041 MYO7BQ6PIF6 2116 aa0.69□□□□□ -2.3
CEP290-201ENST00000309041 SPG11Q96JI7 2443 aa0.68□□□□□ -2.3
CEP290-201ENST00000309041 TRBV6-4A0A1B0GX49 114 aa0.68□□□□□ -2.3
CEP290-201ENST00000309041 TMEM30CPA0ZSE6 113 aa0.68□□□□□ -2.3
CEP290-201ENST00000309041 ZNF670-ZNF695F2Z2N8 137 aa0.68□□□□□ -2.3
CEP290-201ENST00000309041 LINC00483Q53H64 154 aa0.68□□□□□ -2.3
CEP290-201ENST00000309041 SPATA8Q6RVD6 105 aa0.68□□□□□ -2.3
CEP290-201ENST00000309041 ZNF625Q96I27 306 aaPredicted RBP0.68□□□□□ -2.3
CEP290-201ENST00000309041 SMIM7Q9BQ49 75 aa0.68□□□□□ -2.3
CEP290-201ENST00000309041 MAP1AP78559 2803 aaPredicted RBP0.68□□□□□ -2.3
CEP290-201ENST00000309041 EP300Q09472 2414 aaPredicted RBP0.68□□□□□ -2.3
CEP290-201ENST00000309041 TRBV6-5A0A0K0K1A5 114 aa0.68□□□□□ -2.3
CEP290-201ENST00000309041 A6NIN4 97 aa0.68□□□□□ -2.3
CEP290-201ENST00000309041 COX7A2LO14548 114 aa0.68□□□□□ -2.3
CEP290-201ENST00000309041 GNRH2O43555 120 aa0.68□□□□□ -2.3
CEP290-201ENST00000309041 SCRG1O75711 98 aa0.68□□□□□ -2.3
CEP290-201ENST00000309041 SPRR1BP22528 89 aa0.68□□□□□ -2.3
CEP290-201ENST00000309041 ZCCHC13Q8WW36 166 aaKnown RBP0.68□□□□□ -2.3
CEP290-201ENST00000309041 GABARAPL1Q9H0R8 117 aa0.68□□□□□ -2.3
CEP290-201ENST00000309041 PCNX3Q9H6A9 2034 aa0.68□□□□□ -2.3
CEP290-201ENST00000309041 C8orf17Q9NRJ1 99 aa0.68□□□□□ -2.3
CEP290-201ENST00000309041 ABRACLQ9P1F3 81 aa0.68□□□□□ -2.3
CEP290-201ENST00000309041 SS18L2Q9UHA2 77 aa0.68□□□□□ -2.3
CEP290-201ENST00000309041 HTTP42858 3142 aa0.68□□□□□ -2.3
CEP290-201ENST00000309041 IGKV6D-41A0A0C4DH26 115 aa0.68□□□□□ -2.3
CEP290-201ENST00000309041 IGKV3D-7A0A0C4DH55 119 aa0.68□□□□□ -2.3
CEP290-201ENST00000309041 IGKV3OR2-268A0A0C4DH90 116 aa0.68□□□□□ -2.3
CEP290-201ENST00000309041 ATP5J2P56134 94 aa0.68□□□□□ -2.3
CEP290-201ENST00000309041 LINC01554Q52M75 96 aa0.68□□□□□ -2.3
CEP290-201ENST00000309041 Q6ZSA8 131 aa0.68□□□□□ -2.3
CEP290-201ENST00000309041 BAGE2Q86Y30 109 aa0.68□□□□□ -2.3
CEP290-201ENST00000309041 SPTAN1Q13813 2472 aaKnown RBP0.68□□□□□ -2.3
CEP290-201ENST00000309041 RNASE3P12724 160 aaKnown RBP0.68□□□□□ -2.3
CEP290-201ENST00000309041 RPL30P62888 115 aaKnown RBP0.68□□□□□ -2.3
CEP290-201ENST00000309041 C2CD3Q4AC94 2353 aa0.68□□□□□ -2.3
CEP290-201ENST00000309041 KIAA2026Q5HYC2 2103 aa0.68□□□□□ -2.3
CEP290-201ENST00000309041 UQCRHP07919 91 aa0.68□□□□□ -2.3
CEP290-201ENST00000309041 CCL3L1P16619 93 aa0.68□□□□□ -2.3
CEP290-201ENST00000309041 CAV3P56539 151 aa0.68□□□□□ -2.3
CEP290-201ENST00000309041 MOBPQ13875 183 aa0.68□□□□□ -2.3
CEP290-201ENST00000309041 LCN15Q6UWW0 184 aa0.68□□□□□ -2.3
CEP290-201ENST00000309041 CISD1Q9NZ45 108 aaKnown RBP0.68□□□□□ -2.3
CEP290-201ENST00000309041 MYO18AQ92614 2054 aaKnown RBP0.68□□□□□ -2.3
CEP290-201ENST00000309041 TRBV30A0A0K0K1B3 111 aa0.68□□□□□ -2.3
CEP290-201ENST00000309041 K7EIL1 84 aa0.68□□□□□ -2.3
CEP290-201ENST00000309041 C6orf99Q4VX62 202 aa0.68□□□□□ -2.3
CEP290-201ENST00000309041 FREM2Q5SZK8 3169 aa0.68□□□□□ -2.3
CEP290-201ENST00000309041 C8orf87E5RJ46 101 aa0.67□□□□□ -2.3
CEP290-201ENST00000309041 K7EM74 188 aa0.67□□□□□ -2.3
CEP290-201ENST00000309041 KRTAP25-1Q3LHN0 102 aa0.67□□□□□ -2.3
CEP290-201ENST00000309041 TMEM123Q8N131 208 aa0.67□□□□□ -2.3
CEP290-201ENST00000309041 CNEP1R1Q8N9A8 125 aa0.67□□□□□ -2.3
CEP290-201ENST00000309041 OSTCQ9NRP0 149 aa0.67□□□□□ -2.3
CEP290-201ENST00000309041 NAV2Q8IVL1 2488 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms