Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC32.57■■■□□ 2.8
FOXS1O43638 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
FOXS1O43638 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC31.6■■■□□ 2.65
FOXS1O43638 AL356512.1-201ENST00000607453 1739 ntBASIC31.58■■■□□ 2.65
FOXS1O43638 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
FOXS1O43638 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
FOXS1O43638 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC31.41■■■□□ 2.62
FOXS1O43638 HES6-203ENST00000409160 1600 ntTSL 2 BASIC30.96■■■□□ 2.55
FOXS1O43638 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC30.83■■■□□ 2.53
FOXS1O43638 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC30.73■■■□□ 2.51
FOXS1O43638 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC30.72■■■□□ 2.51
FOXS1O43638 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC30.45■■■□□ 2.47
FOXS1O43638 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC30.4■■■□□ 2.46
FOXS1O43638 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC30.31■■■□□ 2.44
FOXS1O43638 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC30.26■■■□□ 2.43
FOXS1O43638 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
FOXS1O43638 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC30.2■■■□□ 2.43
FOXS1O43638 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC30.09■■■□□ 2.41
FOXS1O43638 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC30.04■■■□□ 2.4
FOXS1O43638 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC29.94■■■□□ 2.38
FOXS1O43638 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC29.86■■■□□ 2.37
FOXS1O43638 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC29.56■■■□□ 2.32
FOXS1O43638 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
FOXS1O43638 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
FOXS1O43638 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
FOXS1O43638 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
FOXS1O43638 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC29.36■■■□□ 2.29
FOXS1O43638 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC29.32■■■□□ 2.28
FOXS1O43638 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
FOXS1O43638 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
FOXS1O43638 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC29.17■■■□□ 2.26
FOXS1O43638 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
FOXS1O43638 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC29.1■■■□□ 2.25
FOXS1O43638 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC29.09■■■□□ 2.25
FOXS1O43638 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC29.07■■■□□ 2.24
FOXS1O43638 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC29.05■■■□□ 2.24
FOXS1O43638 INO80B-203ENST00000409917 796 ntTSL 2 BASIC29.04■■■□□ 2.24
FOXS1O43638 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
FOXS1O43638 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC28.91■■■□□ 2.22
FOXS1O43638 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC28.89■■■□□ 2.22
FOXS1O43638 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC28.85■■■□□ 2.21
FOXS1O43638 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
FOXS1O43638 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC28.81■■■□□ 2.2
FOXS1O43638 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
FOXS1O43638 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC28.76■■■□□ 2.19
FOXS1O43638 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC28.74■■■□□ 2.19
FOXS1O43638 AC015813.7-201ENST00000623294 581 ntBASIC28.69■■■□□ 2.18
FOXS1O43638 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
FOXS1O43638 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
FOXS1O43638 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
FOXS1O43638 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC28.49■■■□□ 2.15
FOXS1O43638 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC28.44■■■□□ 2.14
FOXS1O43638 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
FOXS1O43638 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC28.43■■■□□ 2.14
FOXS1O43638 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC28.42■■■□□ 2.14
FOXS1O43638 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
FOXS1O43638 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC28.34■■■□□ 2.13
FOXS1O43638 AC006077.2-201ENST00000623591 457 ntBASIC28.32■■■□□ 2.12
FOXS1O43638 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
FOXS1O43638 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
FOXS1O43638 ZNRF2P1-201ENST00000441407 443 ntBASIC28.21■■■□□ 2.11
FOXS1O43638 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
FOXS1O43638 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
FOXS1O43638 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC28.09■■■□□ 2.09
FOXS1O43638 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
FOXS1O43638 ILK-212ENST00000532063 1617 ntTSL 2 BASIC28.07■■■□□ 2.08
FOXS1O43638 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC28.06■■■□□ 2.08
FOXS1O43638 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
FOXS1O43638 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
FOXS1O43638 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
FOXS1O43638 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
FOXS1O43638 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
FOXS1O43638 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC27.88■■■□□ 2.05
FOXS1O43638 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC27.88■■■□□ 2.05
FOXS1O43638 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
FOXS1O43638 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC27.8■■■□□ 2.04
FOXS1O43638 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC27.79■■■□□ 2.04
FOXS1O43638 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC27.76■■■□□ 2.03
FOXS1O43638 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
FOXS1O43638 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
FOXS1O43638 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
FOXS1O43638 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC27.7■■■□□ 2.02
FOXS1O43638 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
FOXS1O43638 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
FOXS1O43638 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC27.68■■■□□ 2.02
FOXS1O43638 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
FOXS1O43638 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC27.66■■■□□ 2.02
FOXS1O43638 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC27.61■■■□□ 2.01
FOXS1O43638 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
FOXS1O43638 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC27.58■■■□□ 2.01
FOXS1O43638 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC27.58■■■□□ 2.01
FOXS1O43638 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
FOXS1O43638 AP002365.1-201ENST00000603448 772 ntBASIC27.54■■■□□ 2
FOXS1O43638 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC27.5■■□□□ 1.99
FOXS1O43638 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
FOXS1O43638 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC27.47■■□□□ 1.99
FOXS1O43638 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC27.47■■□□□ 1.99
FOXS1O43638 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC27.46■■□□□ 1.99
FOXS1O43638 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC27.46■■□□□ 1.99
FOXS1O43638 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC27.45■■□□□ 1.98
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms