RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 FOXI1Q12951 378 aa9.8□□□□□ -0.84
CDH1-201ENST00000261769 COX6A2Q02221 97 aa9.8□□□□□ -0.84
CDH1-201ENST00000261769 UPK3BQ9BT76 320 aa9.79□□□□□ -0.84
CDH1-201ENST00000261769 COL27A1Q8IZC6 1860 aaPredicted RBP9.79□□□□□ -0.84
CDH1-201ENST00000261769 TRIAP1O43715 76 aa9.79□□□□□ -0.84
CDH1-201ENST00000261769 SLPIP03973 132 aa9.79□□□□□ -0.84
CDH1-201ENST00000261769 FAM19A4Q96LR4 140 aa9.79□□□□□ -0.84
CDH1-201ENST00000261769 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.78□□□□□ -0.84
CDH1-201ENST00000261769 CCKP06307 115 aa9.78□□□□□ -0.84
CDH1-201ENST00000261769 USP24Q9UPU5 2620 aa9.78□□□□□ -0.84
CDH1-201ENST00000261769 ESRGQ1W209 222 aa9.78□□□□□ -0.84
CDH1-201ENST00000261769 KIF25-AS1Q9Y6Z4 181 aa9.78□□□□□ -0.84
CDH1-201ENST00000261769 CHKB-CPT1BH3BT56 60 aa9.77□□□□□ -0.85
CDH1-201ENST00000261769 MAST4O15021 2626 aa9.76□□□□□ -0.85
CDH1-201ENST00000261769 CEP350Q5VT06 3117 aa9.76□□□□□ -0.85
CDH1-201ENST00000261769 REG3GQ6UW15 175 aa9.76□□□□□ -0.85
CDH1-201ENST00000261769 SMIM11BQ8TCY0 68 aa9.76□□□□□ -0.85
CDH1-201ENST00000261769 C9orf116Q5BN46 136 aaPredicted RBP9.76□□□□□ -0.85
CDH1-201ENST00000261769 IGLV9-49A0A0B4J1Y8 123 aa9.75□□□□□ -0.85
CDH1-201ENST00000261769 ATOX1O00244 68 aa9.75□□□□□ -0.85
CDH1-201ENST00000261769 UTRNP46939 3433 aa9.75□□□□□ -0.85
CDH1-201ENST00000261769 SPINK6Q6UWN8 80 aa9.75□□□□□ -0.85
CDH1-201ENST00000261769 LINC00643Q86TS7 51 aa9.74□□□□□ -0.85
CDH1-201ENST00000261769 Q8NAQ8 132 aa9.73□□□□□ -0.85
CDH1-201ENST00000261769 IGKV4-1P06312 121 aa9.73□□□□□ -0.85
CDH1-201ENST00000261769 TRBV10-3A0A0K0K1G6 114 aa9.73□□□□□ -0.85
CDH1-201ENST00000261769 C1orf137Q5JT78 98 aa9.73□□□□□ -0.85
CDH1-201ENST00000261769 C10orf25Q5T742 122 aa9.72□□□□□ -0.85
CDH1-201ENST00000261769 CFAP46Q8IYW2 2715 aa9.72□□□□□ -0.85
CDH1-201ENST00000261769 URB1-AS1Q96HZ7 61 aa9.72□□□□□ -0.85
CDH1-201ENST00000261769 ATRQ13535 2644 aa9.72□□□□□ -0.85
CDH1-201ENST00000261769 MRPL55Q7Z7F7 128 aaKnown RBP9.71□□□□□ -0.85
CDH1-201ENST00000261769 FLNAP21333 2647 aaKnown RBP9.71□□□□□ -0.85
CDH1-201ENST00000261769 ATP5EP2Q5VTU8 51 aa9.7□□□□□ -0.86
CDH1-201ENST00000261769 Q6ZRU5 148 aa9.7□□□□□ -0.86
CDH1-201ENST00000261769 NDUFC2O95298 119 aa9.7□□□□□ -0.86
CDH1-201ENST00000261769 MUC4Q99102 2169 aa9.7□□□□□ -0.86
CDH1-201ENST00000261769 KRTAP1-3Q8IUG1 177 aa9.69□□□□□ -0.86
CDH1-201ENST00000261769 ITPR3Q14573 2671 aa9.69□□□□□ -0.86
CDH1-201ENST00000261769 LST1O00453 97 aa9.69□□□□□ -0.86
CDH1-201ENST00000261769 NBDYA0A0U1RRE5 68 aa9.69□□□□□ -0.86
CDH1-201ENST00000261769 PRYO14603 147 aa9.69□□□□□ -0.86
CDH1-201ENST00000261769 HRCT1Q6UXD1 115 aa9.69□□□□□ -0.86
CDH1-201ENST00000261769 CHD7Q9P2D1 2997 aa9.69□□□□□ -0.86
CDH1-201ENST00000261769 NDUFV3P56181 108 aaKnown RBP9.68□□□□□ -0.86
CDH1-201ENST00000261769 LINC00315P59091 139 aa9.67□□□□□ -0.86
CDH1-201ENST00000261769 C3orf84H3BNL1 204 aa9.67□□□□□ -0.86
CDH1-201ENST00000261769 K7EIL1 84 aa9.67□□□□□ -0.86
CDH1-201ENST00000261769 FAM236AA0A1B0GUQ0 79 aa9.67□□□□□ -0.86
CDH1-201ENST00000261769 FAM236BA0A1B0GV22 79 aa9.67□□□□□ -0.86
CDH1-201ENST00000261769 NTM-AS1Q6ZSK4 140 aa9.66□□□□□ -0.86
CDH1-201ENST00000261769 C2orf91Q6ZV80 131 aa9.66□□□□□ -0.86
CDH1-201ENST00000261769 TEX49A0A1B0GTD5 131 aa9.66□□□□□ -0.86
CDH1-201ENST00000261769 LINC00310P59036 64 aa9.65□□□□□ -0.86
CDH1-201ENST00000261769 Q6JHZ5 121 aa9.65□□□□□ -0.86
CDH1-201ENST00000261769 IGHV3OR16-9A0A0B4J2B5 98 aa9.65□□□□□ -0.86
CDH1-201ENST00000261769 CIRBP-AS1Q8TBR5 109 aa9.64□□□□□ -0.87
CDH1-201ENST00000261769 TMEM258P61165 79 aa9.64□□□□□ -0.87
CDH1-201ENST00000261769 CASC2Q6XLA1 102 aa9.64□□□□□ -0.87
CDH1-201ENST00000261769 A0A096LNJ9 63 aa9.63□□□□□ -0.87
CDH1-201ENST00000261769 KRTAP1-1Q07627 177 aa9.63□□□□□ -0.87
CDH1-201ENST00000261769 LINC00588Q9Y4M8 146 aa9.63□□□□□ -0.87
CDH1-201ENST00000261769 ZNF292O60281 2723 aa9.63□□□□□ -0.87
CDH1-201ENST00000261769 TSPEAR-AS2P59090 65 aa9.62□□□□□ -0.87
CDH1-201ENST00000261769 PRR3P79522 188 aaKnown RBP9.62□□□□□ -0.87
CDH1-201ENST00000261769 C19orf73Q9NVV2 129 aa9.62□□□□□ -0.87
CDH1-201ENST00000261769 CENPEQ02224 2701 aa9.62□□□□□ -0.87
CDH1-201ENST00000261769 SCXQ7RTU7 201 aa9.61□□□□□ -0.87
CDH1-201ENST00000261769 CHD9Q3L8U1 2897 aa9.61□□□□□ -0.87
CDH1-201ENST00000261769 C22orf24Q9Y442 160 aa9.61□□□□□ -0.87
CDH1-201ENST00000261769 FAM229AH3BQW9 127 aa9.6□□□□□ -0.87
CDH1-201ENST00000261769 KRTAP10-11P60412 298 aa9.6□□□□□ -0.87
CDH1-201ENST00000261769 PCNTO95613 3336 aa9.6□□□□□ -0.87
CDH1-201ENST00000261769 Q8N814 137 aa9.6□□□□□ -0.87
CDH1-201ENST00000261769 IGLV5-39A0A0G2JS06 123 aa9.59□□□□□ -0.87
CDH1-201ENST00000261769 C16orf90A8MZG2 172 aa9.59□□□□□ -0.87
CDH1-201ENST00000261769 A8MTW9 85 aa9.59□□□□□ -0.87
CDH1-201ENST00000261769 ADAMTSL4-AS1Q5T5F5 129 aa9.59□□□□□ -0.87
CDH1-201ENST00000261769 SEC61GP60059 68 aa9.58□□□□□ -0.88
CDH1-201ENST00000261769 Q9BRP9 147 aa9.58□□□□□ -0.88
CDH1-201ENST00000261769 KRTAP10-3P60369 221 aa9.58□□□□□ -0.88
CDH1-201ENST00000261769 ENHOQ6UWT2 76 aa9.57□□□□□ -0.88
CDH1-201ENST00000261769 DNAH10OSP0CZ25 163 aa9.56□□□□□ -0.88
CDH1-201ENST00000261769 CSNK1G2-AS1Q8NCQ2 148 aa9.56□□□□□ -0.88
CDH1-201ENST00000261769 RTL8CO15255 209 aa9.56□□□□□ -0.88
CDH1-201ENST00000261769 SDIM1Q6ZPB5 146 aa9.55□□□□□ -0.88
CDH1-201ENST00000261769 LINC01546A6NGU7 62 aa9.55□□□□□ -0.88
CDH1-201ENST00000261769 LIMD2Q9BT23 127 aa9.54□□□□□ -0.88
CDH1-201ENST00000261769 WFDC13Q8IUB5 93 aa9.54□□□□□ -0.88
CDH1-201ENST00000261769 PRLHP81277 87 aa9.54□□□□□ -0.88
CDH1-201ENST00000261769 RANBP2P49792 3224 aaKnown RBP9.53□□□□□ -0.88
CDH1-201ENST00000261769 SMCR5Q8TEV8 140 aa9.53□□□□□ -0.88
CDH1-201ENST00000261769 C6orf48Q9UBA6 75 aa9.52□□□□□ -0.89
CDH1-201ENST00000261769 IGLV5-45A0A087WSX0 123 aa9.52□□□□□ -0.89
CDH1-201ENST00000261769 MT-ATP8P03928 68 aa9.51□□□□□ -0.89
CDH1-201ENST00000261769 TM2D3Q9BRN9 247 aa9.51□□□□□ -0.89
CDH1-201ENST00000261769 Q9UF83 564 aa9.51□□□□□ -0.89
CDH1-201ENST00000261769 SVIPQ8NHG7 77 aa9.51□□□□□ -0.89
CDH1-201ENST00000261769 LINC00167Q96N53 147 aa9.5□□□□□ -0.89
CDH1-201ENST00000261769 J3KT08 172 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms