RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 HIST1H4GQ99525 98 aa12.35□□□□□ -0.43
SNX17-201ENST00000233575 KMT2AQ03164 3969 aa12.34□□□□□ -0.43
SNX17-201ENST00000233575 A0A0U1RRA0 63 aa12.33□□□□□ -0.43
SNX17-201ENST00000233575 APOMO95445 188 aa12.33□□□□□ -0.43
SNX17-201ENST00000233575 SPAG11BQ08648 103 aa12.33□□□□□ -0.43
SNX17-201ENST00000233575 C15orf56Q8N910 161 aa12.33□□□□□ -0.43
SNX17-201ENST00000233575 GCSHP23434 173 aa12.33□□□□□ -0.44
SNX17-201ENST00000233575 HIGD2BQ4VC39 106 aa12.33□□□□□ -0.44
SNX17-201ENST00000233575 SRSF9Q13242 221 aaKnown RBP eCLIP12.32□□□□□ -0.44
SNX17-201ENST00000233575 DAND5Q8N907 189 aa12.32□□□□□ -0.44
SNX17-201ENST00000233575 NBDYA0A0U1RRE5 68 aa12.32□□□□□ -0.44
SNX17-201ENST00000233575 TAL2Q16559 108 aa12.32□□□□□ -0.44
SNX17-201ENST00000233575 CFAP161Q6P656 301 aa12.32□□□□□ -0.44
SNX17-201ENST00000233575 SPANXB1Q9NS25 103 aaPredicted RBP12.32□□□□□ -0.44
SNX17-201ENST00000233575 FXYD2P54710 66 aa12.31□□□□□ -0.44
SNX17-201ENST00000233575 CEND1Q8N111 149 aa12.31□□□□□ -0.44
SNX17-201ENST00000233575 CKS1BP61024 79 aa12.3□□□□□ -0.44
SNX17-201ENST00000233575 HERV-K104P63124 156 aa12.3□□□□□ -0.44
SNX17-201ENST00000233575 MEIG1Q5JSS6 88 aa12.3□□□□□ -0.44
SNX17-201ENST00000233575 TMEM238C9JI98 176 aa12.3□□□□□ -0.44
SNX17-201ENST00000233575 SMIM13P0DJ93 91 aa12.3□□□□□ -0.44
SNX17-201ENST00000233575 C10orf25Q5T742 122 aa12.3□□□□□ -0.44
SNX17-201ENST00000233575 TM2D2Q9BX73 214 aa12.3□□□□□ -0.44
SNX17-201ENST00000233575 M0R2N4 97 aa12.28□□□□□ -0.44
SNX17-201ENST00000233575 NPC2P61916 151 aa12.28□□□□□ -0.44
SNX17-201ENST00000233575 RMI2Q96E14 147 aa12.28□□□□□ -0.44
SNX17-201ENST00000233575 UNQ6190/PRO20217Q6UXQ8 127 aa12.28□□□□□ -0.44
SNX17-201ENST00000233575 EIF4EBP3O60516 100 aaPredicted RBP12.27□□□□□ -0.44
SNX17-201ENST00000233575 TIMM17BO60830 172 aa12.27□□□□□ -0.44
SNX17-201ENST00000233575 NTN5Q8WTR8 489 aaPredicted RBP12.27□□□□□ -0.44
SNX17-201ENST00000233575 LECT2O14960 151 aa12.27□□□□□ -0.45
SNX17-201ENST00000233575 RNF151Q2KHN1 245 aa12.27□□□□□ -0.45
SNX17-201ENST00000233575 C9orf116Q5BN46 136 aaPredicted RBP12.27□□□□□ -0.45
SNX17-201ENST00000233575 PFN2P35080 140 aa12.26□□□□□ -0.45
SNX17-201ENST00000233575 CXCL5P42830 114 aa12.26□□□□□ -0.45
SNX17-201ENST00000233575 TTC32Q5I0X7 151 aa12.26□□□□□ -0.45
SNX17-201ENST00000233575 MUSTN1Q8IVN3 82 aa12.26□□□□□ -0.45
SNX17-201ENST00000233575 SPANXDQ9BXN6 97 aa12.26□□□□□ -0.45
SNX17-201ENST00000233575 SPANXCQ9NY87 97 aa12.26□□□□□ -0.45
SNX17-201ENST00000233575 DNAH2Q9P225 4427 aa12.25□□□□□ -0.45
SNX17-201ENST00000233575 USP17L23D6RBM5 183 aa12.25□□□□□ -0.45
SNX17-201ENST00000233575 ZNF561-AS1K7EIQ3 104 aa12.25□□□□□ -0.45
SNX17-201ENST00000233575 CIRBPQ14011 172 aaKnown RBP12.25□□□□□ -0.45
SNX17-201ENST00000233575 ALMS1Q8TCU4 4167 aa12.25□□□□□ -0.45
SNX17-201ENST00000233575 LY6G6CO95867 125 aa12.25□□□□□ -0.45
SNX17-201ENST00000233575 ERG28Q9UKR5 140 aa12.25□□□□□ -0.45
SNX17-201ENST00000233575 GVQW2A0A096LPI5 108 aaPredicted RBP12.24□□□□□ -0.45
SNX17-201ENST00000233575 A6NDN8 102 aa12.24□□□□□ -0.45
SNX17-201ENST00000233575 C3orf84H3BNL1 204 aa12.24□□□□□ -0.45
SNX17-201ENST00000233575 WFDC2Q14508 124 aa12.24□□□□□ -0.45
SNX17-201ENST00000233575 SFTA2Q6UW10 78 aa12.24□□□□□ -0.45
SNX17-201ENST00000233575 LINC00158P58513 81 aa12.23□□□□□ -0.45
SNX17-201ENST00000233575 Q6ZVH6 145 aa12.23□□□□□ -0.45
SNX17-201ENST00000233575 OCIAD2Q56VL3 154 aa12.23□□□□□ -0.45
SNX17-201ENST00000233575 MIR7-3HGQ8N6C7 128 aa12.23□□□□□ -0.45
SNX17-201ENST00000233575 VPS25Q9BRG1 176 aa12.23□□□□□ -0.45
SNX17-201ENST00000233575 SOSTDC1Q6X4U4 206 aa12.22□□□□□ -0.45
SNX17-201ENST00000233575 LINC00476Q8WZB0 136 aa12.22□□□□□ -0.45
SNX17-201ENST00000233575 HYDINQ4G0P3 5121 aa12.22□□□□□ -0.45
SNX17-201ENST00000233575 K7ERJ3 54 aa12.21□□□□□ -0.45
SNX17-201ENST00000233575 VAMP3Q15836 100 aa12.21□□□□□ -0.45
SNX17-201ENST00000233575 CAMK2N2Q96S95 79 aa12.21□□□□□ -0.45
SNX17-201ENST00000233575 C6orf48Q9UBA6 75 aa12.21□□□□□ -0.45
SNX17-201ENST00000233575 NHP2Q9NX24 153 aaKnown RBP12.21□□□□□ -0.46
SNX17-201ENST00000233575 DNAH6Q9C0G6 4158 aa12.2□□□□□ -0.46
SNX17-201ENST00000233575 TAX1BP3O14907 124 aa12.2□□□□□ -0.46
SNX17-201ENST00000233575 PSCAO43653 123 aa12.2□□□□□ -0.46
SNX17-201ENST00000233575 Q6ZRU5 148 aa12.2□□□□□ -0.46
SNX17-201ENST00000233575 LINC00308Q8TCZ7 52 aa12.2□□□□□ -0.46
SNX17-201ENST00000233575 A4D1N5 150 aa12.2□□□□□ -0.46
SNX17-201ENST00000233575 Q6ZRN7 208 aaPredicted RBP12.2□□□□□ -0.46
SNX17-201ENST00000233575 SLPIP03973 132 aa12.19□□□□□ -0.46
SNX17-201ENST00000233575 Q6ZR54 194 aa12.19□□□□□ -0.46
SNX17-201ENST00000233575 C2orf48Q96LS8 159 aa12.19□□□□□ -0.46
SNX17-201ENST00000233575 TMEM238LA0A1B0GVL6 79 aa12.17□□□□□ -0.46
SNX17-201ENST00000233575 A6NJY4 79 aa12.17□□□□□ -0.46
SNX17-201ENST00000233575 K7ERU9 68 aa12.17□□□□□ -0.46
SNX17-201ENST00000233575 RPL24P83731 157 aaKnown RBP12.16□□□□□ -0.46
SNX17-201ENST00000233575 IFITM1P13164 125 aa12.16□□□□□ -0.46
SNX17-201ENST00000233575 RAB37Q96AX2 223 aa12.16□□□□□ -0.46
SNX17-201ENST00000233575 SYCNQ0VAF6 134 aa12.15□□□□□ -0.46
SNX17-201ENST00000233575 A0A1B0GWB2 263 aa12.15□□□□□ -0.47
SNX17-201ENST00000233575 CFC1BP0CG36 223 aa12.15□□□□□ -0.47
SNX17-201ENST00000233575 CFC1P0CG37 223 aa12.15□□□□□ -0.47
SNX17-201ENST00000233575 COX17Q14061 63 aa12.15□□□□□ -0.47
SNX17-201ENST00000233575 TRBV30A0A0K0K1B3 111 aa12.14□□□□□ -0.47
SNX17-201ENST00000233575 LRCOL1A6NCL2 159 aa12.13□□□□□ -0.47
SNX17-201ENST00000233575 SACSQ9NZJ4 4579 aa12.12□□□□□ -0.47
SNX17-201ENST00000233575 CARD19Q96LW7 228 aa12.11□□□□□ -0.47
SNX17-201ENST00000233575 SND1-IT1Q9HBX3 110 aa12.11□□□□□ -0.47
SNX17-201ENST00000233575 NAA38Q9BRA0 125 aaKnown RBP12.11□□□□□ -0.47
SNX17-201ENST00000233575 C9orf118A6NHY6 69 aa12.1□□□□□ -0.47
SNX17-201ENST00000233575 F8WDY8 70 aa12.1□□□□□ -0.47
SNX17-201ENST00000233575 DNAH17Q9UFH2 4485 aa12.09□□□□□ -0.47
SNX17-201ENST00000233575 SVIPQ8NHG7 77 aa12.09□□□□□ -0.47
SNX17-201ENST00000233575 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.08□□□□□ -0.48
SNX17-201ENST00000233575 XAGE1AQ9HD64 81 aa12.08□□□□□ -0.48
SNX17-201ENST00000233575 H3BUT2 72 aa12.08□□□□□ -0.48
SNX17-201ENST00000233575 Q8NDZ9 215 aa12.08□□□□□ -0.48
SNX17-201ENST00000233575 COPS9Q8WXC6 57 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms