RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 FAM236BA0A1B0GV22 79 aa14.48□□□□□ -0.09
SNX3-201ENST00000230085 UQCRQO14949 82 aa14.47□□□□□ -0.09
SNX3-201ENST00000230085 HIST1H4AP62805 103 aaKnown RBP14.47□□□□□ -0.09
SNX3-201ENST00000230085 KPRPQ5T749 579 aaPredicted RBP14.47□□□□□ -0.09
SNX3-201ENST00000230085 PRB2P02812 416 aaPredicted RBP14.47□□□□□ -0.09
SNX3-201ENST00000230085 OBSCN-AS1Q96MR7 158 aa14.47□□□□□ -0.09
SNX3-201ENST00000230085 C1orf158Q8N1D5 194 aa14.46□□□□□ -0.09
SNX3-201ENST00000230085 C3orf22Q8N5N4 141 aa14.46□□□□□ -0.09
SNX3-201ENST00000230085 FAM218AQ96MZ4 157 aa14.46□□□□□ -0.09
SNX3-201ENST00000230085 LINC00526Q96FQ7 95 aa14.45□□□□□ -0.1
SNX3-201ENST00000230085 H0YGX0 51 aa14.45□□□□□ -0.1
SNX3-201ENST00000230085 MALP21145 153 aa14.45□□□□□ -0.1
SNX3-201ENST00000230085 CRPP02741 224 aa14.43□□□□□ -0.1
SNX3-201ENST00000230085 ODF3L2Q3SX64 289 aa14.42□□□□□ -0.1
SNX3-201ENST00000230085 SMIM20Q8N5G0 67 aa14.42□□□□□ -0.1
SNX3-201ENST00000230085 TMEM243Q9BU79 118 aa14.42□□□□□ -0.1
SNX3-201ENST00000230085 TRAV13-1A0A0B4J241 112 aa14.42□□□□□ -0.1
SNX3-201ENST00000230085 TRGV1A0A0A0MS02 117 aa14.4□□□□□ -0.1
SNX3-201ENST00000230085 COX7B2Q8TF08 81 aa14.4□□□□□ -0.1
SNX3-201ENST00000230085 IGKV2-28A0A075B6P5 120 aa14.39□□□□□ -0.11
SNX3-201ENST00000230085 IGKV2D-28P01615 120 aa14.39□□□□□ -0.11
SNX3-201ENST00000230085 LINC00337Q8N6G1 96 aa14.39□□□□□ -0.11
SNX3-201ENST00000230085 IBA57-AS1B1ANH7 110 aa14.39□□□□□ -0.11
SNX3-201ENST00000230085 TRBV6-4A0A1B0GX49 114 aa14.37□□□□□ -0.11
SNX3-201ENST00000230085 STHQ8IWL8 128 aa14.37□□□□□ -0.11
SNX3-201ENST00000230085 SND1-IT1Q9HBX3 110 aa14.37□□□□□ -0.11
SNX3-201ENST00000230085 ATOX1O00244 68 aa14.37□□□□□ -0.11
SNX3-201ENST00000230085 COX7CP15954 63 aa14.37□□□□□ -0.11
SNX3-201ENST00000230085 CMC4P56277 68 aaPredicted RBP14.37□□□□□ -0.11
SNX3-201ENST00000230085 XCL2Q9UBD3 114 aa14.37□□□□□ -0.11
SNX3-201ENST00000230085 A0A0U1RRA0 63 aa14.36□□□□□ -0.11
SNX3-201ENST00000230085 UBE2L6O14933 153 aa14.36□□□□□ -0.11
SNX3-201ENST00000230085 Q6JHZ5 121 aa14.36□□□□□ -0.11
SNX3-201ENST00000230085 MIR7-3HGQ8N6C7 128 aa14.36□□□□□ -0.11
SNX3-201ENST00000230085 WFDC10AQ9H1F0 79 aa14.36□□□□□ -0.11
SNX3-201ENST00000230085 CRYGAP11844 174 aa14.35□□□□□ -0.11
SNX3-201ENST00000230085 Q6ZTI0 123 aa14.35□□□□□ -0.11
SNX3-201ENST00000230085 K7EIL1 84 aa14.34□□□□□ -0.11
SNX3-201ENST00000230085 C9orf153Q5TBE3 101 aa14.34□□□□□ -0.11
SNX3-201ENST00000230085 C2orf48Q96LS8 159 aa14.34□□□□□ -0.11
SNX3-201ENST00000230085 C19orf73Q9NVV2 129 aa14.34□□□□□ -0.11
SNX3-201ENST00000230085 IGHV3OR16-9A0A0B4J2B5 98 aa14.34□□□□□ -0.11
SNX3-201ENST00000230085 A0A1B0GX51 115 aa14.34□□□□□ -0.11
SNX3-201ENST00000230085 KLK5Q9Y337 293 aaPredicted RBP14.34□□□□□ -0.11
SNX3-201ENST00000230085 MEGF8Q7Z7M0 2845 aa14.34□□□□□ -0.11
SNX3-201ENST00000230085 DNAL4O96015 105 aa14.33□□□□□ -0.12
SNX3-201ENST00000230085 SMIM11BQ8TCY0 68 aa14.33□□□□□ -0.12
SNX3-201ENST00000230085 A0A087WZ39 114 aa14.32□□□□□ -0.12
SNX3-201ENST00000230085 C16orf74Q96GX8 76 aa14.32□□□□□ -0.12
SNX3-201ENST00000230085 GAGE2AQ6NT46 116 aa14.32□□□□□ -0.12
SNX3-201ENST00000230085 PLAC8L1A1L4L8 177 aa14.31□□□□□ -0.12
SNX3-201ENST00000230085 CCL18P55774 89 aa14.31□□□□□ -0.12
SNX3-201ENST00000230085 LINC01561Q8N1V8 128 aa14.3□□□□□ -0.12
SNX3-201ENST00000230085 LINC00167Q96N53 147 aa14.3□□□□□ -0.12
SNX3-201ENST00000230085 FBN3Q75N90 2809 aa14.29□□□□□ -0.12
SNX3-201ENST00000230085 IGHV4-30-4P0DP06 118 aa14.29□□□□□ -0.12
SNX3-201ENST00000230085 Q9HAA7 133 aa14.29□□□□□ -0.12
SNX3-201ENST00000230085 A0A087WYN8 130 aa14.28□□□□□ -0.12
SNX3-201ENST00000230085 MRAPQ8TCY5 172 aa14.28□□□□□ -0.12
SNX3-201ENST00000230085 PRKDCP78527 4128 aaKnown RBP14.27□□□□□ -0.12
SNX3-201ENST00000230085 RPS28P62857 69 aaKnown RBP14.27□□□□□ -0.12
SNX3-201ENST00000230085 RPL18AQ02543 176 aaKnown RBP14.27□□□□□ -0.12
SNX3-201ENST00000230085 TRBV6-8A0A0A6YYG3 113 aa14.26□□□□□ -0.13
SNX3-201ENST00000230085 GIG44P09565 113 aaPredicted RBP14.26□□□□□ -0.13
SNX3-201ENST00000230085 LINC00158P58513 81 aa14.24□□□□□ -0.13
SNX3-201ENST00000230085 NOP10Q9NPE3 64 aaKnown RBP14.24□□□□□ -0.13
SNX3-201ENST00000230085 ATP5EP2Q5VTU8 51 aa14.22□□□□□ -0.13
SNX3-201ENST00000230085 CFAP161Q6P656 301 aa14.22□□□□□ -0.13
SNX3-201ENST00000230085 RPL35AP18077 110 aaKnown RBP14.2□□□□□ -0.14
SNX3-201ENST00000230085 S100A7L2Q5SY68 101 aa14.2□□□□□ -0.14
SNX3-201ENST00000230085 CSNK1G2-AS1Q8NCQ2 148 aa14.2□□□□□ -0.14
SNX3-201ENST00000230085 C14orf132Q9NPU4 83 aa14.2□□□□□ -0.14
SNX3-201ENST00000230085 LINC00846Q9NV44 126 aa14.2□□□□□ -0.14
SNX3-201ENST00000230085 ORMDL1Q9P0S3 153 aa14.2□□□□□ -0.14
SNX3-201ENST00000230085 IGLV4-60A0A075B6I1 120 aa14.19□□□□□ -0.14
SNX3-201ENST00000230085 J3KT08 172 aa14.19□□□□□ -0.14
SNX3-201ENST00000230085 FHL2Q14192 279 aa14.19□□□□□ -0.14
SNX3-201ENST00000230085 C9orf129Q5T035 196 aaKnown RBP14.19□□□□□ -0.14
SNX3-201ENST00000230085 Q8IZM0 81 aa14.19□□□□□ -0.14
SNX3-201ENST00000230085 SERP2Q8N6R1 65 aa14.19□□□□□ -0.14
SNX3-201ENST00000230085 JMJD7-PLA2G4BH0Y9G9 81 aa14.19□□□□□ -0.14
SNX3-201ENST00000230085 LECT2O14960 151 aa14.19□□□□□ -0.14
SNX3-201ENST00000230085 NDUFC2O95298 119 aa14.19□□□□□ -0.14
SNX3-201ENST00000230085 SS18Q15532 418 aa14.19□□□□□ -0.14
SNX3-201ENST00000230085 TRGV2A0A075B6R0 118 aa14.18□□□□□ -0.14
SNX3-201ENST00000230085 A0A1B0GUV1 79 aa14.18□□□□□ -0.14
SNX3-201ENST00000230085 CCKP06307 115 aa14.18□□□□□ -0.14
SNX3-201ENST00000230085 TOMM7Q9P0U1 55 aa14.18□□□□□ -0.14
SNX3-201ENST00000230085 LINC00959A0A1B0GUT2 108 aa14.17□□□□□ -0.14
SNX3-201ENST00000230085 LYPD5Q6UWN5 251 aa14.17□□□□□ -0.14
SNX3-201ENST00000230085 LINC00612Q8N6U2 182 aa14.17□□□□□ -0.14
SNX3-201ENST00000230085 TRGV4A0A0C4DH28 118 aa14.16□□□□□ -0.14
SNX3-201ENST00000230085 LOC100131303A0A0U1RQF7 123 aa14.16□□□□□ -0.14
SNX3-201ENST00000230085 UPK3BQ9BT76 320 aa14.16□□□□□ -0.14
SNX3-201ENST00000230085 TMEM258P61165 79 aa14.15□□□□□ -0.14
SNX3-201ENST00000230085 PAX4O43316 350 aa14.14□□□□□ -0.15
SNX3-201ENST00000230085 COX17Q14061 63 aa14.14□□□□□ -0.15
SNX3-201ENST00000230085 TRBV10-3A0A0K0K1G6 114 aa14.14□□□□□ -0.15
SNX3-201ENST00000230085 NBEAL2Q6ZNJ1 2754 aa14.13□□□□□ -0.15
SNX3-201ENST00000230085 DNAH9Q9NYC9 4486 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms