RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 Q9H8V8 135 aa9.7□□□□□ -0.86
GABPB1-201ENST00000220429 SLURP1P55000 103 aa9.7□□□□□ -0.86
GABPB1-201ENST00000220429 PIK3CD-AS1Q5SR53 167 aa9.7□□□□□ -0.86
GABPB1-201ENST00000220429 ZNF561-AS1K7EIQ3 104 aa9.69□□□□□ -0.86
GABPB1-201ENST00000220429 PF4P02776 101 aa9.69□□□□□ -0.86
GABPB1-201ENST00000220429 SPINK13Q1W4C9 94 aa9.68□□□□□ -0.86
GABPB1-201ENST00000220429 PAX4O43316 350 aa9.68□□□□□ -0.86
GABPB1-201ENST00000220429 MIR7-3HGQ8N6C7 128 aa9.68□□□□□ -0.86
GABPB1-201ENST00000220429 CDKN2A-AS1Q9UH64 79 aa9.68□□□□□ -0.86
GABPB1-201ENST00000220429 LAMTOR3Q9UHA4 124 aa9.68□□□□□ -0.86
GABPB1-201ENST00000220429 IGHV3-16A0A0C4DH30 117 aa9.67□□□□□ -0.86
GABPB1-201ENST00000220429 IBA57-AS1B1ANH7 110 aa9.66□□□□□ -0.86
GABPB1-201ENST00000220429 CRPP02741 224 aa9.66□□□□□ -0.86
GABPB1-201ENST00000220429 UBL5Q9BZL1 73 aa9.66□□□□□ -0.86
GABPB1-201ENST00000220429 PDZD2O15018 2839 aa9.66□□□□□ -0.86
GABPB1-201ENST00000220429 WNK1Q9H4A3 2382 aa9.65□□□□□ -0.86
GABPB1-201ENST00000220429 IGHV1OR15-1A0A075B7D0 117 aa9.65□□□□□ -0.86
GABPB1-201ENST00000220429 H0YGX0 51 aa9.65□□□□□ -0.86
GABPB1-201ENST00000220429 LECT2O14960 151 aa9.65□□□□□ -0.86
GABPB1-201ENST00000220429 ITPR2Q14571 2701 aa9.65□□□□□ -0.87
GABPB1-201ENST00000220429 KHDC1LQ5JSQ8 128 aa9.64□□□□□ -0.87
GABPB1-201ENST00000220429 ACANP16112 2415 aa9.64□□□□□ -0.87
GABPB1-201ENST00000220429 TRAV10A0A0B4J240 114 aa9.64□□□□□ -0.87
GABPB1-201ENST00000220429 IGKV2-29A2NJV5 120 aaPredicted RBP9.64□□□□□ -0.87
GABPB1-201ENST00000220429 C4orf3Q8WVX3 66 aa9.64□□□□□ -0.87
GABPB1-201ENST00000220429 SMIM11BQ8TCY0 68 aa9.63□□□□□ -0.87
GABPB1-201ENST00000220429 ORMDL1Q9P0S3 153 aa9.63□□□□□ -0.87
GABPB1-201ENST00000220429 DEFB131AP59861 70 aa9.63□□□□□ -0.87
GABPB1-201ENST00000220429 SLPIP03973 132 aa9.62□□□□□ -0.87
GABPB1-201ENST00000220429 MIFP14174 115 aa9.62□□□□□ -0.87
GABPB1-201ENST00000220429 LINC00337Q8N6G1 96 aa9.62□□□□□ -0.87
GABPB1-201ENST00000220429 ESRGQ1W209 222 aa9.62□□□□□ -0.87
GABPB1-201ENST00000220429 SETD2Q9BYW2 2564 aaPredicted RBP9.61□□□□□ -0.87
GABPB1-201ENST00000220429 IGLV5-45A0A087WSX0 123 aa9.61□□□□□ -0.87
GABPB1-201ENST00000220429 DNAJC9-AS1A6NH13 148 aa9.61□□□□□ -0.87
GABPB1-201ENST00000220429 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.61□□□□□ -0.87
GABPB1-201ENST00000220429 HELZ2Q9BYK8 2649 aaKnown RBP9.61□□□□□ -0.87
GABPB1-201ENST00000220429 IGLV5-39A0A0G2JS06 123 aa9.61□□□□□ -0.87
GABPB1-201ENST00000220429 JMJD7-PLA2G4BH0Y9G9 81 aa9.61□□□□□ -0.87
GABPB1-201ENST00000220429 C11orf72Q8NBR9 251 aa9.61□□□□□ -0.87
GABPB1-201ENST00000220429 A8MTW9 85 aa9.6□□□□□ -0.87
GABPB1-201ENST00000220429 RPL36AP83881 106 aaKnown RBP9.6□□□□□ -0.87
GABPB1-201ENST00000220429 RPL36ALQ969Q0 106 aaKnown RBP9.6□□□□□ -0.87
GABPB1-201ENST00000220429 ESM1Q9NQ30 184 aa9.6□□□□□ -0.87
GABPB1-201ENST00000220429 MTORP42345 2549 aa9.59□□□□□ -0.87
GABPB1-201ENST00000220429 TRBV7-4A0A0J9YYF1 115 aa9.59□□□□□ -0.87
GABPB1-201ENST00000220429 IGKV2-28A0A075B6P5 120 aa9.58□□□□□ -0.88
GABPB1-201ENST00000220429 A0A087WZ39 114 aa9.58□□□□□ -0.88
GABPB1-201ENST00000220429 IGKV2D-28P01615 120 aa9.58□□□□□ -0.88
GABPB1-201ENST00000220429 DAD1P61803 113 aa9.58□□□□□ -0.88
GABPB1-201ENST00000220429 MRPL55Q7Z7F7 128 aaKnown RBP9.58□□□□□ -0.88
GABPB1-201ENST00000220429 KMT2BQ9UMN6 2715 aaPredicted RBP9.58□□□□□ -0.88
GABPB1-201ENST00000220429 COX6A2Q02221 97 aa9.58□□□□□ -0.88
GABPB1-201ENST00000220429 DEFB114Q30KQ6 69 aa9.58□□□□□ -0.88
GABPB1-201ENST00000220429 DYNLRB2Q8TF09 96 aa9.58□□□□□ -0.88
GABPB1-201ENST00000220429 MAP6D1Q9H9H5 199 aa9.58□□□□□ -0.88
GABPB1-201ENST00000220429 KRTAP1-1Q07627 177 aa9.57□□□□□ -0.88
GABPB1-201ENST00000220429 NIPBLQ6KC79 2804 aaeCLIP9.57□□□□□ -0.88
GABPB1-201ENST00000220429 PRM2P04554 102 aa9.57□□□□□ -0.88
GABPB1-201ENST00000220429 HTN1P15515 57 aa9.57□□□□□ -0.88
GABPB1-201ENST00000220429 C11orf44Q8N8P7 122 aa9.57□□□□□ -0.88
GABPB1-201ENST00000220429 TM2D3Q9BRN9 247 aa9.56□□□□□ -0.88
GABPB1-201ENST00000220429 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.56□□□□□ -0.88
GABPB1-201ENST00000220429 C6orf223Q8N319 242 aa9.56□□□□□ -0.88
GABPB1-201ENST00000220429 SND1-IT1Q9HBX3 110 aa9.56□□□□□ -0.88
GABPB1-201ENST00000220429 CHCHD7Q9BUK0 85 aa9.55□□□□□ -0.88
GABPB1-201ENST00000220429 LINC01547P58512 204 aaPredicted RBP9.54□□□□□ -0.88
GABPB1-201ENST00000220429 C4orf48Q5BLP8 95 aa9.54□□□□□ -0.88
GABPB1-201ENST00000220429 Q6ZTI0 123 aa9.54□□□□□ -0.88
GABPB1-201ENST00000220429 UNC79Q9P2D8 2635 aa9.54□□□□□ -0.88
GABPB1-201ENST00000220429 SMIM1B2RUZ4 78 aa9.54□□□□□ -0.88
GABPB1-201ENST00000220429 PLA2G2AP14555 144 aa9.54□□□□□ -0.88
GABPB1-201ENST00000220429 TMEM254Q8TBM7 123 aa9.54□□□□□ -0.88
GABPB1-201ENST00000220429 IGHV3-38A0A0C4DH36 116 aa9.53□□□□□ -0.88
GABPB1-201ENST00000220429 IGHV3-73A0A0B4J1V6 119 aa9.52□□□□□ -0.89
GABPB1-201ENST00000220429 HAMPP81172 84 aa9.52□□□□□ -0.89
GABPB1-201ENST00000220429 ODF3L2Q3SX64 289 aa9.52□□□□□ -0.89
GABPB1-201ENST00000220429 LINC00467Q9BRT7 94 aa9.52□□□□□ -0.89
GABPB1-201ENST00000220429 PROK1P58294 105 aa9.52□□□□□ -0.89
GABPB1-201ENST00000220429 C11orf68Q9H3H3 251 aaKnown RBP9.52□□□□□ -0.89
GABPB1-201ENST00000220429 J3QKU1 62 aa9.51□□□□□ -0.89
GABPB1-201ENST00000220429 CCL24O00175 119 aa9.51□□□□□ -0.89
GABPB1-201ENST00000220429 LINC00242Q5T6M2 205 aa9.51□□□□□ -0.89
GABPB1-201ENST00000220429 Q8N3U1 123 aa9.51□□□□□ -0.89
GABPB1-201ENST00000220429 SETXQ7Z333 2677 aaKnown RBP9.51□□□□□ -0.89
GABPB1-201ENST00000220429 FUSP35637 526 aaKnown RBP eCLIP9.51□□□□□ -0.89
GABPB1-201ENST00000220429 JMJD1CQ15652 2540 aa9.5□□□□□ -0.89
GABPB1-201ENST00000220429 TMEM256-PLSCR3K7ERE1 68 aa9.5□□□□□ -0.89
GABPB1-201ENST00000220429 NOTCH3Q9UM47 2321 aa9.5□□□□□ -0.89
GABPB1-201ENST00000220429 NREPQ16612 68 aa9.5□□□□□ -0.89
GABPB1-201ENST00000220429 Q6ZTC4 211 aa9.5□□□□□ -0.89
GABPB1-201ENST00000220429 LINC01006Q8NI28 216 aa9.5□□□□□ -0.89
GABPB1-201ENST00000220429 DGAT2L7PQ6IED9 249 aa9.49□□□□□ -0.89
GABPB1-201ENST00000220429 STHQ8IWL8 128 aa9.49□□□□□ -0.89
GABPB1-201ENST00000220429 IGHV3OR16-12A0A075B7B8 117 aa9.49□□□□□ -0.89
GABPB1-201ENST00000220429 INSP01308 110 aa9.49□□□□□ -0.89
GABPB1-201ENST00000220429 LINC00167Q96N53 147 aa9.49□□□□□ -0.89
GABPB1-201ENST00000220429 FASNP49327 2511 aaKnown RBP9.49□□□□□ -0.89
GABPB1-201ENST00000220429 RNASE1P07998 156 aaKnown RBP9.48□□□□□ -0.89
GABPB1-201ENST00000220429 Q1T7F1 81 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 373.2 ms