RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Trav5-1A0A075B5Z7 114 aa10.78□□□□□ -0.68
Nup88-201ENSMUST00000035283 Gm20379A0A087WR34 119 aa10.78□□□□□ -0.68
Nup88-201ENSMUST00000035283 IgipA0A1B0GR74 53 aa10.78□□□□□ -0.68
Nup88-201ENSMUST00000035283 Cd3eP22646 189 aa10.78□□□□□ -0.68
Nup88-201ENSMUST00000035283 Olfr1381Q7TQT4 311 aa10.78□□□□□ -0.68
Nup88-201ENSMUST00000035283 Olfr1373Q7TQT6 311 aa10.78□□□□□ -0.68
Nup88-201ENSMUST00000035283 Ammecr1lQ8JZZ6 310 aa10.78□□□□□ -0.68
Nup88-201ENSMUST00000035283 Gm10645Q3UPY1 145 aa10.77□□□□□ -0.69
Nup88-201ENSMUST00000035283 Cox7a2lQ61387 111 aa10.77□□□□□ -0.69
Nup88-201ENSMUST00000035283 Scgb2b24Q7M747 112 aa10.77□□□□□ -0.69
Nup88-201ENSMUST00000035283 Rnf24Q8BGI1 148 aa10.77□□□□□ -0.69
Nup88-201ENSMUST00000035283 Lrfn3Q8BLY3 626 aa10.77□□□□□ -0.69
Nup88-201ENSMUST00000035283 Defa22Q8C1N8 93 aa10.77□□□□□ -0.69
Nup88-201ENSMUST00000035283 Leprotl1Q9CQ74 131 aa10.77□□□□□ -0.69
Nup88-201ENSMUST00000035283 Tmem178aQ9CZ16 297 aa10.77□□□□□ -0.69
Nup88-201ENSMUST00000035283 Fam241bQ9D882 120 aa10.77□□□□□ -0.69
Nup88-201ENSMUST00000035283 Crip1P63254 77 aa10.77□□□□□ -0.69
Nup88-201ENSMUST00000035283 Q24JP4 165 aa10.77□□□□□ -0.69
Nup88-201ENSMUST00000035283 Eda2rQ8BX35 297 aa10.77□□□□□ -0.69
Nup88-201ENSMUST00000035283 Pear1Q8VIK5 1034 aa10.77□□□□□ -0.69
Nup88-201ENSMUST00000035283 Mrpl32Q9DCI9 187 aaKnown RBP10.77□□□□□ -0.69
Nup88-201ENSMUST00000035283 Ncoa6Q9JL19 2067 aa10.76□□□□□ -0.69
Nup88-201ENSMUST00000035283 Trav8n-2A0A075B633 112 aa10.76□□□□□ -0.69
Nup88-201ENSMUST00000035283 Scgb1b19F6WYW0 93 aa10.76□□□□□ -0.69
Nup88-201ENSMUST00000035283 Brs3O54798 399 aa10.76□□□□□ -0.69
Nup88-201ENSMUST00000035283 Cd27P41272 250 aa10.76□□□□□ -0.69
Nup88-201ENSMUST00000035283 Gimap1P70224 277 aa10.76□□□□□ -0.69
Nup88-201ENSMUST00000035283 SeleQ00690 612 aa10.76□□□□□ -0.69
Nup88-201ENSMUST00000035283 Psg25Q497W1 475 aa10.76□□□□□ -0.69
Nup88-201ENSMUST00000035283 Olfr411Q7TRW8 315 aa10.76□□□□□ -0.69
Nup88-201ENSMUST00000035283 Gm12689Q8BQU9 117 aa10.76□□□□□ -0.69
Nup88-201ENSMUST00000035283 Fhl4Q8CDC8 279 aa10.76□□□□□ -0.69
Nup88-201ENSMUST00000035283 Rnase2aQ8K196 155 aa10.76□□□□□ -0.69
Nup88-201ENSMUST00000035283 Klk10Q99M20 278 aa10.76□□□□□ -0.69
Nup88-201ENSMUST00000035283 Trav9-1A0A075B601 112 aa10.76□□□□□ -0.69
Nup88-201ENSMUST00000035283 Ighv3-6P18531 116 aa10.76□□□□□ -0.69
Nup88-201ENSMUST00000035283 Spem1Q5F289 310 aa10.76□□□□□ -0.69
Nup88-201ENSMUST00000035283 Vmn1r195Q5SVD6 316 aa10.76□□□□□ -0.69
Nup88-201ENSMUST00000035283 PirtQ8BFY0 135 aa10.76□□□□□ -0.69
Nup88-201ENSMUST00000035283 Hnrnpa3Q8BG05 379 aaKnown RBP10.76□□□□□ -0.69
Nup88-201ENSMUST00000035283 Zc2hc1aQ8BJH1 324 aa10.76□□□□□ -0.69
Nup88-201ENSMUST00000035283 Tcrg-C2A0A075B5Z2 167 aa10.75□□□□□ -0.69
Nup88-201ENSMUST00000035283 P01853 167 aa10.75□□□□□ -0.69
Nup88-201ENSMUST00000035283 Trav6d-4Q5R1I0 115 aa10.75□□□□□ -0.69
Nup88-201ENSMUST00000035283 Sp9Q64HY3 484 aa10.75□□□□□ -0.69
Nup88-201ENSMUST00000035283 Golt1bQ9CR60 138 aa10.75□□□□□ -0.69
Nup88-201ENSMUST00000035283 Rnase4Q9JJH1 148 aa10.75□□□□□ -0.69
Nup88-201ENSMUST00000035283 Bex1Q9R224 128 aa10.75□□□□□ -0.69
Nup88-201ENSMUST00000035283 Trav14-3A0A075B607 120 aa10.75□□□□□ -0.69
Nup88-201ENSMUST00000035283 Platr25A0A1Y7VIZ1 466 aa10.75□□□□□ -0.69
Nup88-201ENSMUST00000035283 P04943 107 aa10.75□□□□□ -0.69
Nup88-201ENSMUST00000035283 Zfp92Q62396 488 aa10.75□□□□□ -0.69
Nup88-201ENSMUST00000035283 Znf787Q8BIF9 381 aa10.75□□□□□ -0.69
Nup88-201ENSMUST00000035283 B430305J03RikQ8BQQ8 176 aa10.75□□□□□ -0.69
Nup88-201ENSMUST00000035283 Abca1P41233 2261 aa10.74□□□□□ -0.69
Nup88-201ENSMUST00000035283 Olfr364-ps1A0A140T8Q2 307 aa10.74□□□□□ -0.69
Nup88-201ENSMUST00000035283 Fgfbp1O70514 251 aa10.74□□□□□ -0.69
Nup88-201ENSMUST00000035283 Icam2P35330 277 aa10.74□□□□□ -0.69
Nup88-201ENSMUST00000035283 Gm9733Q1AN91 178 aa10.74□□□□□ -0.69
Nup88-201ENSMUST00000035283 Gm9949Q8C9F4 104 aa10.74□□□□□ -0.69
Nup88-201ENSMUST00000035283 Klk13Q8CGR6 276 aa10.74□□□□□ -0.69
Nup88-201ENSMUST00000035283 Ifitm2Q99J93 144 aa10.74□□□□□ -0.69
Nup88-201ENSMUST00000035283 Trappc2lQ9JME7 139 aa10.74□□□□□ -0.69
Nup88-201ENSMUST00000035283 Ang4Q3TMQ6 144 aa10.74□□□□□ -0.69
Nup88-201ENSMUST00000035283 Oosp2Q4FZG8 168 aa10.74□□□□□ -0.69
Nup88-201ENSMUST00000035283 Olfr433Q7TRV9 314 aa10.74□□□□□ -0.69
Nup88-201ENSMUST00000035283 Rnd1Q8BLR7 232 aa10.74□□□□□ -0.69
Nup88-201ENSMUST00000035283 Tmem177Q8BPE4 311 aa10.74□□□□□ -0.69
Nup88-201ENSMUST00000035283 Zfp119aQ9JIC0 545 aa10.74□□□□□ -0.69
Nup88-201ENSMUST00000035283 TracA0A075B662 137 aa10.73□□□□□ -0.69
Nup88-201ENSMUST00000035283 Olfr1098A2AVB0 315 aa10.73□□□□□ -0.69
Nup88-201ENSMUST00000035283 Gm28305F6U473 122 aa10.73□□□□□ -0.69
Nup88-201ENSMUST00000035283 BtcQ05928 177 aa10.73□□□□□ -0.69
Nup88-201ENSMUST00000035283 Pilrb2Q2YFS1 225 aa10.73□□□□□ -0.69
Nup88-201ENSMUST00000035283 C330021F23RikQ8C7T0 141 aa10.73□□□□□ -0.69
Nup88-201ENSMUST00000035283 Dazap1Q9JII5 406 aaKnown RBP10.73□□□□□ -0.69
Nup88-201ENSMUST00000035283 Tomm40Q9QYA2 361 aa10.73□□□□□ -0.69
Nup88-201ENSMUST00000035283 EsdQ9R0P3 282 aa10.73□□□□□ -0.69
Nup88-201ENSMUST00000035283 Vma21-psA0A140T8R2 101 aa10.73□□□□□ -0.69
Nup88-201ENSMUST00000035283 Mex3bQ69Z36 601 aaKnown RBP10.73□□□□□ -0.69
Nup88-201ENSMUST00000035283 Zg16Q8K0C5 167 aa10.73□□□□□ -0.69
Nup88-201ENSMUST00000035283 Ociad1Q9CRD0 247 aaKnown RBP10.73□□□□□ -0.69
Nup88-201ENSMUST00000035283 Ighv1-7A0A075B5T7 117 aa10.72□□□□□ -0.69
Nup88-201ENSMUST00000035283 Trav6-6A0A075B603 114 aa10.72□□□□□ -0.69
Nup88-201ENSMUST00000035283 Ighv5-16A0A0B4J1P4 117 aa10.72□□□□□ -0.69
Nup88-201ENSMUST00000035283 Gm765B2RVL9 189 aa10.72□□□□□ -0.69
Nup88-201ENSMUST00000035283 Cd209gD3Z5D4 194 aa10.72□□□□□ -0.69
Nup88-201ENSMUST00000035283 Fosl1P48755 273 aa10.72□□□□□ -0.69
Nup88-201ENSMUST00000035283 AdipoqQ60994 247 aa10.72□□□□□ -0.69
Nup88-201ENSMUST00000035283 PdfS4R2K0 231 aa10.72□□□□□ -0.69
Nup88-201ENSMUST00000035283 Sh2d6Q9D413 297 aa10.72□□□□□ -0.69
Nup88-201ENSMUST00000035283 CompQ9R0G6 755 aa10.72□□□□□ -0.69
Nup88-201ENSMUST00000035283 Cacna1hO88427 2365 aa10.71□□□□□ -0.69
Nup88-201ENSMUST00000035283 Rtl10D3YWW5 146 aa10.71□□□□□ -0.69
Nup88-201ENSMUST00000035283 NgfP01139 241 aa10.71□□□□□ -0.69
Nup88-201ENSMUST00000035283 P01793 123 aa10.71□□□□□ -0.69
Nup88-201ENSMUST00000035283 Defa-rs2P17534 91 aa10.71□□□□□ -0.69
Nup88-201ENSMUST00000035283 Cox7a2P48771 83 aa10.71□□□□□ -0.69
Nup88-201ENSMUST00000035283 SrstQ06666 185 aa10.71□□□□□ -0.69
Nup88-201ENSMUST00000035283 Gm10188Q3V432 135 aa10.71□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 44.7 ms