RNA–Protein interactions for RNA: ENST00000641588.1

CASC19-243, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,546 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-243ENST00000641588 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.88□□□□□ -1.63
CASC19-243ENST00000641588 TRIOBPQ9H2D6 2365 aa4.88□□□□□ -1.63
CASC19-243ENST00000641588 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.87□□□□□ -1.63
CASC19-243ENST00000641588 BPY2O14599 106 aa4.87□□□□□ -1.63
CASC19-243ENST00000641588 LINC00158P58513 81 aa4.87□□□□□ -1.63
CASC19-243ENST00000641588 HAMPP81172 84 aa4.87□□□□□ -1.63
CASC19-243ENST00000641588 RNASE13Q5GAN3 156 aaKnown RBP4.87□□□□□ -1.63
CASC19-243ENST00000641588 RHPN1-AS1Q9BWJ2 59 aa4.87□□□□□ -1.63
CASC19-243ENST00000641588 AHCTF1Q8WYP5 2266 aa4.87□□□□□ -1.63
CASC19-243ENST00000641588 A0A087WZ39 114 aa4.87□□□□□ -1.63
CASC19-243ENST00000641588 BSPH1Q075Z2 132 aa4.87□□□□□ -1.63
CASC19-243ENST00000641588 DEFB114Q30KQ6 69 aa4.87□□□□□ -1.63
CASC19-243ENST00000641588 FAM229BQ4G0N7 80 aa4.87□□□□□ -1.63
CASC19-243ENST00000641588 NTM-AS1Q6ZSK4 140 aa4.87□□□□□ -1.63
CASC19-243ENST00000641588 STHQ8IWL8 128 aa4.87□□□□□ -1.63
CASC19-243ENST00000641588 URB1O60287 2271 aaKnown RBP4.86□□□□□ -1.63
CASC19-243ENST00000641588 EYSQ5T1H1 3165 aa4.86□□□□□ -1.63
CASC19-243ENST00000641588 WNK2Q9Y3S1 2297 aa4.86□□□□□ -1.63
CASC19-243ENST00000641588 SLPIP03973 132 aa4.86□□□□□ -1.63
CASC19-243ENST00000641588 FAM215AQ9Y5M1 114 aa4.86□□□□□ -1.63
CASC19-243ENST00000641588 PRUNE2Q8WUY3 3088 aa4.86□□□□□ -1.63
CASC19-243ENST00000641588 REV3LO60673 3130 aa4.85□□□□□ -1.63
CASC19-243ENST00000641588 TRBV10-1A0A0K0K1A3 114 aa4.85□□□□□ -1.63
CASC19-243ENST00000641588 LY6HO94772 140 aa4.85□□□□□ -1.63
CASC19-243ENST00000641588 GNLYP22749 145 aa4.85□□□□□ -1.63
CASC19-243ENST00000641588 MUC7Q8TAX7 377 aa4.85□□□□□ -1.63
CASC19-243ENST00000641588 CYP4F30PQ9H0H9 118 aa4.85□□□□□ -1.63
CASC19-243ENST00000641588 CDC42SE2Q9NRR3 84 aa4.85□□□□□ -1.63
CASC19-243ENST00000641588 K7EQG2 157 aa4.84□□□□□ -1.63
CASC19-243ENST00000641588 BBC3Q96PG8 261 aaPredicted RBP4.84□□□□□ -1.63
CASC19-243ENST00000641588 OCR1Q9BZK8 76 aa4.84□□□□□ -1.63
CASC19-243ENST00000641588 LCE6AA0A183 80 aa4.83□□□□□ -1.64
CASC19-243ENST00000641588 XIRP2A4UGR9 3374 aa4.83□□□□□ -1.64
CASC19-243ENST00000641588 A8MTW9 85 aa4.83□□□□□ -1.64
CASC19-243ENST00000641588 UBE2L6O14933 153 aa4.83□□□□□ -1.64
CASC19-243ENST00000641588 IGHV4-31P0DP07 118 aa4.83□□□□□ -1.64
CASC19-243ENST00000641588 UBE2AP49459 152 aa4.83□□□□□ -1.64
CASC19-243ENST00000641588 LINC00575Q6W349 94 aa4.83□□□□□ -1.64
CASC19-243ENST00000641588 PHF5AQ7RTV0 110 aaKnown RBP4.83□□□□□ -1.64
CASC19-243ENST00000641588 PRO3102Q9H379 93 aa4.83□□□□□ -1.64
CASC19-243ENST00000641588 RBM12B-AS1Q9P1G2 102 aa4.83□□□□□ -1.64
CASC19-243ENST00000641588 LINC00588Q9Y4M8 146 aa4.83□□□□□ -1.64
CASC19-243ENST00000641588 COL6A3P12111 3177 aa4.83□□□□□ -1.64
CASC19-243ENST00000641588 G3V318 75 aa4.82□□□□□ -1.64
CASC19-243ENST00000641588 DEFB1P60022 68 aa4.82□□□□□ -1.64
CASC19-243ENST00000641588 PRB3Q04118 309 aaPredicted RBP4.82□□□□□ -1.64
CASC19-243ENST00000641588 ATP11AUNQ6ZP68 121 aa4.82□□□□□ -1.64
CASC19-243ENST00000641588 Q6ZRP5 223 aa4.82□□□□□ -1.64
CASC19-243ENST00000641588 Q6ZTI0 123 aa4.82□□□□□ -1.64
CASC19-243ENST00000641588 C5orf56Q8N8D9 126 aa4.82□□□□□ -1.64
CASC19-243ENST00000641588 ESM1Q9NQ30 184 aa4.82□□□□□ -1.64
CASC19-243ENST00000641588 UNC80Q8N2C7 3258 aa4.82□□□□□ -1.64
CASC19-243ENST00000641588 A0A1B0GW54 56 aa4.82□□□□□ -1.64
CASC19-243ENST00000641588 COX17Q14061 63 aa4.82□□□□□ -1.64
CASC19-243ENST00000641588 TMEM105Q8N8V8 129 aa4.82□□□□□ -1.64
CASC19-243ENST00000641588 ABCA4P78363 2273 aa4.81□□□□□ -1.64
CASC19-243ENST00000641588 ICE1Q9Y2F5 2266 aa4.81□□□□□ -1.64
CASC19-243ENST00000641588 TRAV22A0A0B4J277 110 aa4.81□□□□□ -1.64
CASC19-243ENST00000641588 M0R378 163 aa4.81□□□□□ -1.64
CASC19-243ENST00000641588 IGFL3Q6UXB1 125 aa4.81□□□□□ -1.64
CASC19-243ENST00000641588 FDCSPQ8NFU4 85 aa4.81□□□□□ -1.64
CASC19-243ENST00000641588 LIMD2Q9BT23 127 aa4.81□□□□□ -1.64
CASC19-243ENST00000641588 Q9UF83 564 aa4.81□□□□□ -1.64
CASC19-243ENST00000641588 TRBV6-8A0A0A6YYG3 113 aa4.8□□□□□ -1.64
CASC19-243ENST00000641588 NDUFB1O75438 58 aa4.8□□□□□ -1.64
CASC19-243ENST00000641588 ELOF1P60002 83 aaKnown RBP4.8□□□□□ -1.64
CASC19-243ENST00000641588 LMO4P61968 165 aa4.8□□□□□ -1.64
CASC19-243ENST00000641588 C5orf42Q9H799 3197 aa4.79□□□□□ -1.64
CASC19-243ENST00000641588 A0A096LNT2 108 aa4.79□□□□□ -1.64
CASC19-243ENST00000641588 A0A1W2PNU3 283 aaPredicted RBP4.79□□□□□ -1.64
CASC19-243ENST00000641588 NANOS2P60321 138 aaKnown RBP4.79□□□□□ -1.64
CASC19-243ENST00000641588 SYCNQ0VAF6 134 aa4.79□□□□□ -1.64
CASC19-243ENST00000641588 SPINK13Q1W4C9 94 aa4.79□□□□□ -1.64
CASC19-243ENST00000641588 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.79□□□□□ -1.64
CASC19-243ENST00000641588 C1orf64Q8NEQ6 169 aa4.79□□□□□ -1.64
CASC19-243ENST00000641588 IGHV4-30-2A0A087WSY4 118 aa4.78□□□□□ -1.64
CASC19-243ENST00000641588 IGHV3-73A0A0B4J1V6 119 aa4.78□□□□□ -1.64
CASC19-243ENST00000641588 IGHV3OR16-9A0A0B4J2B5 98 aa4.78□□□□□ -1.64
CASC19-243ENST00000641588 VPREB1P12018 145 aa4.78□□□□□ -1.64
CASC19-243ENST00000641588 PROK1P58294 105 aa4.78□□□□□ -1.64
CASC19-243ENST00000641588 KRTAP10-2P60368 255 aa4.78□□□□□ -1.64
CASC19-243ENST00000641588 CD164L2Q6UWJ8 174 aa4.78□□□□□ -1.64
CASC19-243ENST00000641588 SPATA3Q8NHX4 192 aa4.78□□□□□ -1.64
CASC19-243ENST00000641588 VCANP13611 3396 aa4.78□□□□□ -1.64
CASC19-243ENST00000641588 SDK1Q7Z5N4 2213 aa4.78□□□□□ -1.64
CASC19-243ENST00000641588 CCL24O00175 119 aa4.77□□□□□ -1.65
CASC19-243ENST00000641588 PSCAO43653 123 aa4.77□□□□□ -1.65
CASC19-243ENST00000641588 COX7BP24311 80 aa4.77□□□□□ -1.65
CASC19-243ENST00000641588 Q8IZM0 81 aa4.77□□□□□ -1.65
CASC19-243ENST00000641588 ZCCHC13Q8WW36 166 aaKnown RBP4.77□□□□□ -1.65
CASC19-243ENST00000641588 SPTBN5Q9NRC6 3674 aaKnown RBP4.77□□□□□ -1.65
CASC19-243ENST00000641588 IGKV4-1P06312 121 aa4.77□□□□□ -1.65
CASC19-243ENST00000641588 PLA2G2AP14555 144 aa4.77□□□□□ -1.65
CASC19-243ENST00000641588 LPAL2Q16609 132 aa4.77□□□□□ -1.65
CASC19-243ENST00000641588 ATP1A1-AS1Q5TC04 95 aa4.77□□□□□ -1.65
CASC19-243ENST00000641588 LINC00269Q8N2A0 174 aa4.77□□□□□ -1.65
CASC19-243ENST00000641588 TOMM7Q9P0U1 55 aa4.77□□□□□ -1.65
CASC19-243ENST00000641588 POLEQ07864 2286 aa4.77□□□□□ -1.65
CASC19-243ENST00000641588 IGKV3-7A0A075B6H7 116 aa4.76□□□□□ -1.65
CASC19-243ENST00000641588 LYNX1G3V0Z9 82 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms