RNA–Protein interactions for RNA: ENST00000591994.1

RPRD1A-210, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 2

Gene RPRD1A, Length 2,484 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-210ENST00000591994 LOC105371267A0A1B0GV96 52 aa0.13□□□□□ -2.39
RPRD1A-210ENST00000591994 MPC1LP0DKB6 136 aa0.13□□□□□ -2.39
RPRD1A-210ENST00000591994 SPRR2EP22531 72 aa0.13□□□□□ -2.39
RPRD1A-210ENST00000591994 SPRR2BP35325 72 aa0.13□□□□□ -2.39
RPRD1A-210ENST00000591994 SPRR2AP35326 72 aa0.13□□□□□ -2.39
RPRD1A-210ENST00000591994 EMX2Q04743 252 aa0.13□□□□□ -2.39
RPRD1A-210ENST00000591994 SNX29P2Q8IUI4 249 aa0.13□□□□□ -2.39
RPRD1A-210ENST00000591994 GSKIPQ9P0R6 139 aa0.13□□□□□ -2.39
RPRD1A-210ENST00000591994 RGPD2P0DJD1 1756 aa0.13□□□□□ -2.39
RPRD1A-210ENST00000591994 ITPR3Q14573 2671 aa0.13□□□□□ -2.39
RPRD1A-210ENST00000591994 ANKRD11Q6UB99 2663 aaPredicted RBP0.13□□□□□ -2.39
RPRD1A-210ENST00000591994 USP9YO00507 2555 aaPredicted RBP0.13□□□□□ -2.39
RPRD1A-210ENST00000591994 FAM186AA6NE01 2351 aa0.13□□□□□ -2.39
RPRD1A-210ENST00000591994 BTAF1O14981 1849 aa0.13□□□□□ -2.39
RPRD1A-210ENST00000591994 DUOX2Q9NRD8 1548 aa0.13□□□□□ -2.39
RPRD1A-210ENST00000591994 CCDC141Q6ZP82 1450 aa0.13□□□□□ -2.39
RPRD1A-210ENST00000591994 APOC1P02654 83 aa0.13□□□□□ -2.39
RPRD1A-210ENST00000591994 VSTM2AQ8TAG5 236 aa0.13□□□□□ -2.39
RPRD1A-210ENST00000591994 BATF3Q9NR55 127 aa0.13□□□□□ -2.39
RPRD1A-210ENST00000591994 SONP18583 2426 aaKnown RBP0.13□□□□□ -2.39
RPRD1A-210ENST00000591994 CNOT1A5YKK6 2376 aaKnown RBP0.13□□□□□ -2.39
RPRD1A-210ENST00000591994 PLXNB2O15031 1838 aa0.13□□□□□ -2.39
RPRD1A-210ENST00000591994 APC2O95996 2303 aa0.12□□□□□ -2.39
RPRD1A-210ENST00000591994 WNK2Q9Y3S1 2297 aa0.12□□□□□ -2.39
RPRD1A-210ENST00000591994 A0A087WTM6 91 aa0.12□□□□□ -2.39
RPRD1A-210ENST00000591994 M0R129 80 aa0.12□□□□□ -2.39
RPRD1A-210ENST00000591994 IGLC6P0CF74 106 aa0.12□□□□□ -2.39
RPRD1A-210ENST00000591994 SLC25A6P12236 298 aa0.12□□□□□ -2.39
RPRD1A-210ENST00000591994 CKS1BP61024 79 aa0.12□□□□□ -2.39
RPRD1A-210ENST00000591994 HIST1H1AQ02539 215 aaPredicted RBP0.12□□□□□ -2.39
RPRD1A-210ENST00000591994 CLLU1Q5K131 121 aa0.12□□□□□ -2.39
RPRD1A-210ENST00000591994 DSCR8Q96T75 97 aa0.12□□□□□ -2.39
RPRD1A-210ENST00000591994 COA4Q9NYJ1 87 aa0.12□□□□□ -2.39
RPRD1A-210ENST00000591994 BET1LQ9NYM9 111 aa0.12□□□□□ -2.39
RPRD1A-210ENST00000591994 ACANP16112 2415 aa0.12□□□□□ -2.39
RPRD1A-210ENST00000591994 NAIPQ13075 1403 aa0.12□□□□□ -2.39
RPRD1A-210ENST00000591994 CCL3L1P16619 93 aa0.12□□□□□ -2.39
RPRD1A-210ENST00000591994 ELOF1P60002 83 aaKnown RBP0.12□□□□□ -2.39
RPRD1A-210ENST00000591994 NCS1P62166 190 aa0.12□□□□□ -2.39
RPRD1A-210ENST00000591994 SCIMPQ6UWF3 145 aa0.12□□□□□ -2.39
RPRD1A-210ENST00000591994 PAIP2BQ9ULR5 123 aaKnown RBP0.12□□□□□ -2.39
RPRD1A-210ENST00000591994 HIVEP1P15822 2718 aa0.12□□□□□ -2.39
RPRD1A-210ENST00000591994 PLECQ15149 4684 aaKnown RBP0.12□□□□□ -2.39
RPRD1A-210ENST00000591994 FLNAP21333 2647 aaKnown RBP0.12□□□□□ -2.39
RPRD1A-210ENST00000591994 CEP295Q9C0D2 2601 aa0.12□□□□□ -2.39
RPRD1A-210ENST00000591994 NBASA2RRP1 2371 aa0.12□□□□□ -2.39
RPRD1A-210ENST00000591994 PITX3O75364 302 aa0.11□□□□□ -2.39
RPRD1A-210ENST00000591994 SMIM21Q3B7S5 101 aa0.11□□□□□ -2.39
RPRD1A-210ENST00000591994 LINC01545Q5VT33 79 aa0.11□□□□□ -2.39
RPRD1A-210ENST00000591994 SPINK6Q6UWN8 80 aa0.11□□□□□ -2.39
RPRD1A-210ENST00000591994 TMEM141Q96I45 108 aa0.11□□□□□ -2.39
RPRD1A-210ENST00000591994 PLCE1Q9P212 2302 aa0.11□□□□□ -2.39
RPRD1A-210ENST00000591994 PKHD1P08F94 4074 aa0.11□□□□□ -2.39
RPRD1A-210ENST00000591994 LRRK2Q5S007 2527 aa0.11□□□□□ -2.39
RPRD1A-210ENST00000591994 SPTAN1Q13813 2472 aaKnown RBP0.11□□□□□ -2.39
RPRD1A-210ENST00000591994 RIF1Q5UIP0 2472 aaKnown RBP0.11□□□□□ -2.39
RPRD1A-210ENST00000591994 DNAH1Q9P2D7 4330 aa0.11□□□□□ -2.39
RPRD1A-210ENST00000591994 SPTBN1Q01082 2364 aaKnown RBP0.11□□□□□ -2.39
RPRD1A-210ENST00000591994 FAM236AA0A1B0GUQ0 79 aa0.11□□□□□ -2.39
RPRD1A-210ENST00000591994 FAM236BA0A1B0GV22 79 aa0.11□□□□□ -2.39
RPRD1A-210ENST00000591994 RBAKDNA6NC62 111 aa0.11□□□□□ -2.39
RPRD1A-210ENST00000591994 C10orf142B7Z368 130 aa0.11□□□□□ -2.39
RPRD1A-210ENST00000591994 LOC730098B7Z3J9 87 aa0.11□□□□□ -2.39
RPRD1A-210ENST00000591994 SSBP1Q04837 148 aaKnown RBP0.11□□□□□ -2.39
RPRD1A-210ENST00000591994 SPANXN1Q5VSR9 72 aa0.11□□□□□ -2.39
RPRD1A-210ENST00000591994 DEFB104AQ8WTQ1 72 aa0.11□□□□□ -2.39
RPRD1A-210ENST00000591994 ANP32BQ92688 251 aaKnown RBP0.11□□□□□ -2.39
RPRD1A-210ENST00000591994 COPZ2Q9P299 210 aa0.11□□□□□ -2.39
RPRD1A-210ENST00000591994 KIF20BQ96Q89 1820 aa0.11□□□□□ -2.39
RPRD1A-210ENST00000591994 LRP1Q07954 4544 aaKnown RBP0.11□□□□□ -2.39
RPRD1A-210ENST00000591994 MGAM2Q2M2H8 2515 aa0.11□□□□□ -2.39
RPRD1A-210ENST00000591994 SPEF2Q9C093 1822 aa0.1□□□□□ -2.39
RPRD1A-210ENST00000591994 TCRBV3S1A0A5B6 114 aa0.1□□□□□ -2.39
RPRD1A-210ENST00000591994 ZNF670-ZNF695F2Z2N8 137 aa0.1□□□□□ -2.39
RPRD1A-210ENST00000591994 LINC00694P0DN24 101 aa0.1□□□□□ -2.39
RPRD1A-210ENST00000591994 NPC2P61916 151 aa0.1□□□□□ -2.39
RPRD1A-210ENST00000591994 SLC48A1Q6P1K1 146 aa0.1□□□□□ -2.39
RPRD1A-210ENST00000591994 CYP2G1PQ6ZSU1 146 aa0.1□□□□□ -2.39
RPRD1A-210ENST00000591994 CTAGE3PQ8IX95 158 aa0.1□□□□□ -2.39
RPRD1A-210ENST00000591994 IFI27L1Q96BM0 104 aa0.1□□□□□ -2.39
RPRD1A-210ENST00000591994 PROK2Q9HC23 129 aa0.1□□□□□ -2.39
RPRD1A-210ENST00000591994 GVQW2A0A096LPI5 108 aaPredicted RBP0.1□□□□□ -2.39
RPRD1A-210ENST00000591994 NPFFO15130 113 aa0.1□□□□□ -2.39
RPRD1A-210ENST00000591994 COX6B1P14854 86 aa0.1□□□□□ -2.39
RPRD1A-210ENST00000591994 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.1□□□□□ -2.39
RPRD1A-210ENST00000591994 Q6ZUT4 128 aa0.1□□□□□ -2.39
RPRD1A-210ENST00000591994 VMO1Q7Z5L0 202 aa0.1□□□□□ -2.39
RPRD1A-210ENST00000591994 MAFIPQ8WZ33 124 aa0.1□□□□□ -2.39
RPRD1A-210ENST00000591994 BPESC1Q9GZL8 116 aa0.1□□□□□ -2.39
RPRD1A-210ENST00000591994 TMEM191AQ9H0A3 160 aa0.1□□□□□ -2.39
RPRD1A-210ENST00000591994 TPT1P8Q9HAU6 139 aa0.1□□□□□ -2.39
RPRD1A-210ENST00000591994 NDUFA12Q9UI09 145 aa0.1□□□□□ -2.39
RPRD1A-210ENST00000591994 SPTA1P02549 2419 aa0.1□□□□□ -2.39
RPRD1A-210ENST00000591994 FOCADQ5VW36 1801 aa0.1□□□□□ -2.39
RPRD1A-210ENST00000591994 DCHS2Q6V1P9 2916 aa0.1□□□□□ -2.39
RPRD1A-210ENST00000591994 PPLO60437 1756 aa0.1□□□□□ -2.39
RPRD1A-210ENST00000591994 PDCD11Q14690 1871 aaKnown RBP0.09□□□□□ -2.39
RPRD1A-210ENST00000591994 CFAP46Q8IYW2 2715 aa0.09□□□□□ -2.39
RPRD1A-210ENST00000591994 TNXBP22105 4242 aa0.09□□□□□ -2.39
RPRD1A-210ENST00000591994 VPS13DQ5THJ4 4388 aa0.09□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms