RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 A6NDN8 102 aa20.03■□□□□ 0.8
CTDNEP1-208ENST00000573600 GCSHP23434 173 aa20.03■□□□□ 0.8
CTDNEP1-208ENST00000573600 TM2D2Q9BX73 214 aa20.03■□□□□ 0.8
CTDNEP1-208ENST00000573600 LINC00959A0A1B0GUT2 108 aa20.02■□□□□ 0.8
CTDNEP1-208ENST00000573600 CCL25O15444 150 aa20.02■□□□□ 0.8
CTDNEP1-208ENST00000573600 NBEAL1Q6ZS30 2694 aa20.01■□□□□ 0.79
CTDNEP1-208ENST00000573600 ZFAND6Q6FIF0 208 aa20.01■□□□□ 0.79
CTDNEP1-208ENST00000573600 SMIM1B2RUZ4 78 aa20■□□□□ 0.79
CTDNEP1-208ENST00000573600 SS18Q15532 418 aa20■□□□□ 0.79
CTDNEP1-208ENST00000573600 SPANXB1Q9NS25 103 aaPredicted RBP20■□□□□ 0.79
CTDNEP1-208ENST00000573600 MGAM2Q2M2H8 2515 aa20■□□□□ 0.79
CTDNEP1-208ENST00000573600 NDUFA12Q9UI09 145 aa19.99■□□□□ 0.79
CTDNEP1-208ENST00000573600 TRAV10A0A0B4J240 114 aa19.99■□□□□ 0.79
CTDNEP1-208ENST00000573600 SRSF9Q13242 221 aaKnown RBP eCLIP19.97■□□□□ 0.79
CTDNEP1-208ENST00000573600 IGHV3OR16-9A0A0B4J2B5 98 aa19.96■□□□□ 0.79
CTDNEP1-208ENST00000573600 PTTG1IPP53801 180 aa19.96■□□□□ 0.79
CTDNEP1-208ENST00000573600 FXYD2P54710 66 aa19.96■□□□□ 0.79
CTDNEP1-208ENST00000573600 C10orf126Q8N4M7 172 aa19.96■□□□□ 0.79
CTDNEP1-208ENST00000573600 TENM3Q9P273 2699 aa19.96■□□□□ 0.79
CTDNEP1-208ENST00000573600 ANGP03950 147 aaKnown RBP19.96■□□□□ 0.79
CTDNEP1-208ENST00000573600 A0A0J9YXY3 114 aa19.95■□□□□ 0.78
CTDNEP1-208ENST00000573600 LINC00269Q8N2A0 174 aa19.95■□□□□ 0.78
CTDNEP1-208ENST00000573600 NDUFA1O15239 70 aa19.93■□□□□ 0.78
CTDNEP1-208ENST00000573600 B9D2Q9BPU9 175 aa19.93■□□□□ 0.78
CTDNEP1-208ENST00000573600 A0A087WZ39 114 aa19.92■□□□□ 0.78
CTDNEP1-208ENST00000573600 TMEM238C9JI98 176 aa19.92■□□□□ 0.78
CTDNEP1-208ENST00000573600 TAX1BP3O14907 124 aa19.92■□□□□ 0.78
CTDNEP1-208ENST00000573600 REG3AQ06141 175 aa19.92■□□□□ 0.78
CTDNEP1-208ENST00000573600 CLPSL2Q6UWE3 100 aa19.91■□□□□ 0.78
CTDNEP1-208ENST00000573600 Q8N3U1 123 aa19.9■□□□□ 0.78
CTDNEP1-208ENST00000573600 C15orf53Q8NAA6 179 aa19.9■□□□□ 0.78
CTDNEP1-208ENST00000573600 COX11Q9Y6N1 276 aa19.89■□□□□ 0.77
CTDNEP1-208ENST00000573600 SMIM13P0DJ93 91 aa19.88■□□□□ 0.77
CTDNEP1-208ENST00000573600 DNHD1Q96M86 4753 aa19.88■□□□□ 0.77
CTDNEP1-208ENST00000573600 TMEM238LA0A1B0GVL6 79 aa19.88■□□□□ 0.77
CTDNEP1-208ENST00000573600 A6NJY4 79 aa19.88■□□□□ 0.77
CTDNEP1-208ENST00000573600 K7EP13 123 aa19.88■□□□□ 0.77
CTDNEP1-208ENST00000573600 XCL1P47992 114 aa19.88■□□□□ 0.77
CTDNEP1-208ENST00000573600 ESRGQ1W209 222 aa19.88■□□□□ 0.77
CTDNEP1-208ENST00000573600 LINC01561Q8N1V8 128 aa19.88■□□□□ 0.77
CTDNEP1-208ENST00000573600 IGHV3-30P01768 117 aa19.87■□□□□ 0.77
CTDNEP1-208ENST00000573600 IGHV3-30-5P0DP03 117 aa19.87■□□□□ 0.77
CTDNEP1-208ENST00000573600 HUWE1Q7Z6Z7 4374 aaKnown RBP19.86■□□□□ 0.77
CTDNEP1-208ENST00000573600 CD164L2Q6UWJ8 174 aa19.85■□□□□ 0.77
CTDNEP1-208ENST00000573600 C5orf38Q86SI9 138 aa19.85■□□□□ 0.77
CTDNEP1-208ENST00000573600 COX7B2Q8TF08 81 aa19.85■□□□□ 0.77
CTDNEP1-208ENST00000573600 Q9H8V8 135 aa19.85■□□□□ 0.77
CTDNEP1-208ENST00000573600 NHP2Q9NX24 153 aaKnown RBP19.85■□□□□ 0.77
CTDNEP1-208ENST00000573600 TIMM17BO60830 172 aa19.85■□□□□ 0.77
CTDNEP1-208ENST00000573600 PRR34Q9NV39 138 aa19.85■□□□□ 0.77
CTDNEP1-208ENST00000573600 CHCHD10Q8WYQ3 142 aaPredicted RBP19.84■□□□□ 0.77
CTDNEP1-208ENST00000573600 HERV-K104P63124 156 aa19.83■□□□□ 0.77
CTDNEP1-208ENST00000573600 LITAFQ99732 161 aa19.83■□□□□ 0.77
CTDNEP1-208ENST00000573600 Q6ZVH6 145 aa19.82■□□□□ 0.76
CTDNEP1-208ENST00000573600 WFDC10BQ8IUB3 73 aa19.82■□□□□ 0.76
CTDNEP1-208ENST00000573600 ZNF625Q96I27 306 aaPredicted RBP19.82■□□□□ 0.76
CTDNEP1-208ENST00000573600 KLK12Q9UKR0 248 aa19.82■□□□□ 0.76
CTDNEP1-208ENST00000573600 SPANXDQ9BXN6 97 aa19.82■□□□□ 0.76
CTDNEP1-208ENST00000573600 SPANXCQ9NY87 97 aa19.82■□□□□ 0.76
CTDNEP1-208ENST00000573600 CIRBPQ14011 172 aaKnown RBP19.81■□□□□ 0.76
CTDNEP1-208ENST00000573600 IGHV3-33P01772 117 aa19.8■□□□□ 0.76
CTDNEP1-208ENST00000573600 A0A1B0GWB2 263 aa19.79■□□□□ 0.76
CTDNEP1-208ENST00000573600 TOMM7Q9P0U1 55 aa19.79■□□□□ 0.76
CTDNEP1-208ENST00000573600 IGLV10-54A0A075B6I4 117 aa19.77■□□□□ 0.76
CTDNEP1-208ENST00000573600 C9orf118A6NHY6 69 aa19.77■□□□□ 0.76
CTDNEP1-208ENST00000573600 COX7A2LO14548 114 aa19.77■□□□□ 0.76
CTDNEP1-208ENST00000573600 CRPP02741 224 aa19.77■□□□□ 0.76
CTDNEP1-208ENST00000573600 RAB37Q96AX2 223 aa19.77■□□□□ 0.76
CTDNEP1-208ENST00000573600 NHLRC4P0CG21 123 aaPredicted RBP19.76■□□□□ 0.75
CTDNEP1-208ENST00000573600 RPL24P83731 157 aaKnown RBP19.76■□□□□ 0.75
CTDNEP1-208ENST00000573600 SFTA2Q6UW10 78 aa19.76■□□□□ 0.75
CTDNEP1-208ENST00000573600 ENHOQ6UWT2 76 aa19.76■□□□□ 0.75
CTDNEP1-208ENST00000573600 MIAQ16674 131 aa19.76■□□□□ 0.75
CTDNEP1-208ENST00000573600 MUSTN1Q8IVN3 82 aa19.76■□□□□ 0.75
CTDNEP1-208ENST00000573600 TRAV8-4A0A0B4J246 113 aa19.75■□□□□ 0.75
CTDNEP1-208ENST00000573600 K7ERJ3 54 aa19.75■□□□□ 0.75
CTDNEP1-208ENST00000573600 ADAMTSL4-AS1Q5T5F5 129 aa19.75■□□□□ 0.75
CTDNEP1-208ENST00000573600 LINC01556Q5JQF7 62 aa19.73■□□□□ 0.75
CTDNEP1-208ENST00000573600 FOXI1Q12951 378 aa19.73■□□□□ 0.75
CTDNEP1-208ENST00000573600 MEIG1Q5JSS6 88 aa19.73■□□□□ 0.75
CTDNEP1-208ENST00000573600 Q8IZM0 81 aa19.73■□□□□ 0.75
CTDNEP1-208ENST00000573600 IFITM1P13164 125 aa19.72■□□□□ 0.75
CTDNEP1-208ENST00000573600 UBE2WQ96B02 151 aa19.72■□□□□ 0.75
CTDNEP1-208ENST00000573600 IGLL5B9A064 214 aa19.71■□□□□ 0.75
CTDNEP1-208ENST00000573600 PRSS2P07478 247 aa19.71■□□□□ 0.75
CTDNEP1-208ENST00000573600 MALP21145 153 aa19.71■□□□□ 0.75
CTDNEP1-208ENST00000573600 C6orf226Q5I0X4 101 aa19.71■□□□□ 0.75
CTDNEP1-208ENST00000573600 GAGE12HA6NDE8 117 aa19.7■□□□□ 0.74
CTDNEP1-208ENST00000573600 H3BUT2 72 aa19.69■□□□□ 0.74
CTDNEP1-208ENST00000573600 CCL18P55774 89 aa19.69■□□□□ 0.74
CTDNEP1-208ENST00000573600 A4D1N5 150 aa19.68■□□□□ 0.74
CTDNEP1-208ENST00000573600 DNAH9Q9NYC9 4486 aa19.68■□□□□ 0.74
CTDNEP1-208ENST00000573600 TRAV16A0A0A6YYK6 109 aaPredicted RBP19.68■□□□□ 0.74
CTDNEP1-208ENST00000573600 VAMP3Q15836 100 aa19.68■□□□□ 0.74
CTDNEP1-208ENST00000573600 COPS9Q8WXC6 57 aa19.68■□□□□ 0.74
CTDNEP1-208ENST00000573600 APOMO95445 188 aa19.67■□□□□ 0.74
CTDNEP1-208ENST00000573600 DNAH10OSP0CZ25 163 aa19.66■□□□□ 0.74
CTDNEP1-208ENST00000573600 LINC00588Q9Y4M8 146 aa19.66■□□□□ 0.74
CTDNEP1-208ENST00000573600 CFC1BP0CG36 223 aa19.65■□□□□ 0.74
CTDNEP1-208ENST00000573600 CFC1P0CG37 223 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms