RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 PFDN5Q99471 154 aa1.91□□□□□ -2.1
CNOT1-221ENST00000569924 MGST2Q99735 147 aa1.91□□□□□ -2.1
CNOT1-221ENST00000569924 TXNDC17Q9BRA2 123 aa1.91□□□□□ -2.1
CNOT1-221ENST00000569924 WDR61Q9GZS3 305 aaKnown RBP1.91□□□□□ -2.1
CNOT1-221ENST00000569924 AGPAT4-IT1Q9H0P7 198 aa1.91□□□□□ -2.1
CNOT1-221ENST00000569924 C11orf1Q9H5F2 150 aa1.91□□□□□ -2.1
CNOT1-221ENST00000569924 MRPL16Q9NX20 251 aaKnown RBP1.91□□□□□ -2.1
CNOT1-221ENST00000569924 ANAPC11Q9NYG5 84 aa1.91□□□□□ -2.1
CNOT1-221ENST00000569924 TMEM14CQ9P0S9 112 aa1.91□□□□□ -2.1
CNOT1-221ENST00000569924 SS18L2Q9UHA2 77 aa1.91□□□□□ -2.1
CNOT1-221ENST00000569924 SSPOA2VEC9 5147 aa1.91□□□□□ -2.1
CNOT1-221ENST00000569924 TRBV20OR9-2A0A075B6H5 130 aa1.9□□□□□ -2.11
CNOT1-221ENST00000569924 TRGV4A0A0C4DH28 118 aa1.9□□□□□ -2.11
CNOT1-221ENST00000569924 IBA57-AS1B1ANH7 110 aa1.9□□□□□ -2.11
CNOT1-221ENST00000569924 M0R3E3 92 aa1.9□□□□□ -2.11
CNOT1-221ENST00000569924 PSCAO43653 123 aa1.9□□□□□ -2.11
CNOT1-221ENST00000569924 NDUFB6O95139 128 aa1.9□□□□□ -2.11
CNOT1-221ENST00000569924 GPX1P07203 203 aa1.9□□□□□ -2.11
CNOT1-221ENST00000569924 SRP19P09132 144 aaKnown RBP1.9□□□□□ -2.11
CNOT1-221ENST00000569924 TSPEAR-AS2P59090 65 aa1.9□□□□□ -2.11
CNOT1-221ENST00000569924 RAB4BP61018 213 aa1.9□□□□□ -2.11
CNOT1-221ENST00000569924 HAMPP81172 84 aa1.9□□□□□ -2.11
CNOT1-221ENST00000569924 TDRG1Q3Y452 100 aa1.9□□□□□ -2.11
CNOT1-221ENST00000569924 PYDC2Q56P42 97 aa1.9□□□□□ -2.11
CNOT1-221ENST00000569924 LINC01556Q5JQF7 62 aa1.9□□□□□ -2.11
CNOT1-221ENST00000569924 TMEM78Q5T7P6 136 aa1.9□□□□□ -2.11
CNOT1-221ENST00000569924 Q8N814 137 aa1.9□□□□□ -2.11
CNOT1-221ENST00000569924 DAND5Q8N907 189 aa1.9□□□□□ -2.11
CNOT1-221ENST00000569924 KRTAP2-2Q9BYT5 123 aa1.9□□□□□ -2.11
CNOT1-221ENST00000569924 SH3BGRL3Q9H299 93 aa1.9□□□□□ -2.11
CNOT1-221ENST00000569924 BATF3Q9NR55 127 aa1.9□□□□□ -2.11
CNOT1-221ENST00000569924 LYRM2Q9NU23 88 aaPredicted RBP1.9□□□□□ -2.11
CNOT1-221ENST00000569924 SLC39A9Q9NUM3 307 aa1.9□□□□□ -2.11
CNOT1-221ENST00000569924 TIMM9Q9Y5J7 89 aa1.9□□□□□ -2.11
CNOT1-221ENST00000569924 V9GYH0 126 aa1.9□□□□□ -2.11
CNOT1-221ENST00000569924 PKHD1L1Q86WI1 4243 aa1.9□□□□□ -2.11
CNOT1-221ENST00000569924 TRAV4A0A0B4J268 109 aa1.89□□□□□ -2.11
CNOT1-221ENST00000569924 RBAKDNA6NC62 111 aa1.89□□□□□ -2.11
CNOT1-221ENST00000569924 NAP1L6A6NFF2 107 aa1.89□□□□□ -2.11
CNOT1-221ENST00000569924 TSTD3H0UI37 97 aa1.89□□□□□ -2.11
CNOT1-221ENST00000569924 M0R2P5 195 aa1.89□□□□□ -2.11
CNOT1-221ENST00000569924 SFTA3P0C7M3 94 aa1.89□□□□□ -2.11
CNOT1-221ENST00000569924 S100A11P31949 105 aa1.89□□□□□ -2.11
CNOT1-221ENST00000569924 S100A12P80511 92 aa1.89□□□□□ -2.11
CNOT1-221ENST00000569924 AKR1C8PQ5T2L2 129 aa1.89□□□□□ -2.11
CNOT1-221ENST00000569924 PRR9Q5T870 116 aa1.89□□□□□ -2.11
CNOT1-221ENST00000569924 MIC13Q5XKP0 118 aa1.89□□□□□ -2.11
CNOT1-221ENST00000569924 Q6AWC8 147 aa1.89□□□□□ -2.11
CNOT1-221ENST00000569924 RASL11AQ6T310 242 aa1.89□□□□□ -2.11
CNOT1-221ENST00000569924 SDIM1Q6ZPB5 146 aa1.89□□□□□ -2.11
CNOT1-221ENST00000569924 EXOC3-AS1Q8N2X6 119 aa1.89□□□□□ -2.11
CNOT1-221ENST00000569924 SEC22CQ9BRL7 303 aa1.89□□□□□ -2.11
CNOT1-221ENST00000569924 LENEPQ9Y5L5 61 aa1.89□□□□□ -2.11
CNOT1-221ENST00000569924 MACF1Q9UPN3 7388 aaKnown RBP1.88□□□□□ -2.11
CNOT1-221ENST00000569924 TRAV9-1A0A075B6T8 112 aa1.88□□□□□ -2.11
CNOT1-221ENST00000569924 IGKV2-40A0A087WW87 121 aaPredicted RBP1.88□□□□□ -2.11
CNOT1-221ENST00000569924 UBE2L5PA0A1B0GUS4 154 aa1.88□□□□□ -2.11
CNOT1-221ENST00000569924 TRBV6-4A0A1B0GX49 114 aa1.88□□□□□ -2.11
CNOT1-221ENST00000569924 IGSF23A1L1A6 192 aa1.88□□□□□ -2.11
CNOT1-221ENST00000569924 FAM24AA6NFZ4 105 aa1.88□□□□□ -2.11
CNOT1-221ENST00000569924 UBE2L6O14933 153 aa1.88□□□□□ -2.11
CNOT1-221ENST00000569924 CST7O76096 145 aa1.88□□□□□ -2.11
CNOT1-221ENST00000569924 NDUFC2O95298 119 aa1.88□□□□□ -2.11
CNOT1-221ENST00000569924 IGKV2D-40P01614 121 aaPredicted RBP1.88□□□□□ -2.11
CNOT1-221ENST00000569924 PYYP10082 97 aa1.88□□□□□ -2.11
CNOT1-221ENST00000569924 CSN1S1P47710 185 aa1.88□□□□□ -2.11
CNOT1-221ENST00000569924 KRTAP10-4P60372 401 aaPredicted RBP1.88□□□□□ -2.11
CNOT1-221ENST00000569924 GNG5P63218 68 aa1.88□□□□□ -2.11
CNOT1-221ENST00000569924 WFDC2Q14508 124 aa1.88□□□□□ -2.11
CNOT1-221ENST00000569924 ZNF846Q147U1 533 aa1.88□□□□□ -2.11
CNOT1-221ENST00000569924 RHOHQ15669 191 aa1.88□□□□□ -2.11
CNOT1-221ENST00000569924 LELP1Q5T871 98 aa1.88□□□□□ -2.11
CNOT1-221ENST00000569924 TOMM6Q96B49 74 aa1.88□□□□□ -2.11
CNOT1-221ENST00000569924 FAM167A-AS1Q96KT0 104 aa1.88□□□□□ -2.11
CNOT1-221ENST00000569924 NPCDR1Q9BY65 106 aa1.88□□□□□ -2.11
CNOT1-221ENST00000569924 GSKIPQ9P0R6 139 aa1.88□□□□□ -2.11
CNOT1-221ENST00000569924 KLK12Q9UKR0 248 aa1.88□□□□□ -2.11
CNOT1-221ENST00000569924 CYSLTR1Q9Y271 337 aa1.88□□□□□ -2.11
CNOT1-221ENST00000569924 TRAV21A0A0B4J279 112 aa1.87□□□□□ -2.11
CNOT1-221ENST00000569924 GRIFINA4D1Z8 144 aa1.87□□□□□ -2.11
CNOT1-221ENST00000569924 GNRH2O43555 120 aa1.87□□□□□ -2.11
CNOT1-221ENST00000569924 IGHV3-30P01768 117 aa1.87□□□□□ -2.11
CNOT1-221ENST00000569924 IGHV3-33P01772 117 aa1.87□□□□□ -2.11
CNOT1-221ENST00000569924 IGHV3-30-5P0DP03 117 aa1.87□□□□□ -2.11
CNOT1-221ENST00000569924 FGF7P21781 194 aa1.87□□□□□ -2.11
CNOT1-221ENST00000569924 RBX1P62877 108 aa1.87□□□□□ -2.11
CNOT1-221ENST00000569924 CFAP126Q5VTH2 177 aa1.87□□□□□ -2.11
CNOT1-221ENST00000569924 MIR17HGQ75NE6 70 aa1.87□□□□□ -2.11
CNOT1-221ENST00000569924 ATP6V0E2Q8NHE4 81 aa1.87□□□□□ -2.11
CNOT1-221ENST00000569924 Q8TAT8 98 aa1.87□□□□□ -2.11
CNOT1-221ENST00000569924 C2orf50Q96LR7 162 aa1.87□□□□□ -2.11
CNOT1-221ENST00000569924 PRADC1Q9BSG0 188 aa1.87□□□□□ -2.11
CNOT1-221ENST00000569924 SMDT1Q9H4I9 107 aa1.87□□□□□ -2.11
CNOT1-221ENST00000569924 LRP2P98164 4655 aa1.87□□□□□ -2.11
CNOT1-221ENST00000569924 TNXBP22105 4242 aa1.86□□□□□ -2.11
CNOT1-221ENST00000569924 IGLV4-60A0A075B6I1 120 aa1.86□□□□□ -2.11
CNOT1-221ENST00000569924 IGKV2D-24A0A075B6R9 120 aa1.86□□□□□ -2.11
CNOT1-221ENST00000569924 A0A087WWC5 75 aa1.86□□□□□ -2.11
CNOT1-221ENST00000569924 MAP1LC3B2A6NCE7 125 aa1.86□□□□□ -2.11
CNOT1-221ENST00000569924 C19orf71A6NCJ1 209 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms