RNA–Protein interactions for RNA: ENST00000566889.5

FANCA-221, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-221ENST00000566889 HRCT1Q6UXD1 115 aa17.68■□□□□ 0.42
FANCA-221ENST00000566889 SORL1Q92673 2214 aa17.68■□□□□ 0.42
FANCA-221ENST00000566889 ZNF292O60281 2723 aa17.67■□□□□ 0.42
FANCA-221ENST00000566889 IL17DQ8TAD2 202 aa17.67■□□□□ 0.42
FANCA-221ENST00000566889 TTC28Q96AY4 2481 aa17.67■□□□□ 0.42
FANCA-221ENST00000566889 MAP6D1Q9H9H5 199 aa17.67■□□□□ 0.42
FANCA-221ENST00000566889 SLPIP03973 132 aa17.66■□□□□ 0.42
FANCA-221ENST00000566889 TRGV1A0A0A0MS02 117 aa17.66■□□□□ 0.42
FANCA-221ENST00000566889 TRBV6-4A0A1B0GX49 114 aa17.66■□□□□ 0.42
FANCA-221ENST00000566889 PAX4O43316 350 aa17.66■□□□□ 0.42
FANCA-221ENST00000566889 MRAPQ8TCY5 172 aa17.66■□□□□ 0.42
FANCA-221ENST00000566889 IGHV4-59P01825 116 aa17.65■□□□□ 0.42
FANCA-221ENST00000566889 SPTAN1Q13813 2472 aaKnown RBP17.64■□□□□ 0.42
FANCA-221ENST00000566889 UCNP55089 124 aa17.64■□□□□ 0.42
FANCA-221ENST00000566889 HILS1P60008 231 aa17.64■□□□□ 0.41
FANCA-221ENST00000566889 BCE1O60756 84 aa17.62■□□□□ 0.41
FANCA-221ENST00000566889 TRAV23DV6A0A075B6W5 121 aa17.62■□□□□ 0.41
FANCA-221ENST00000566889 TMEM256-PLSCR3K7ERE1 68 aa17.6■□□□□ 0.41
FANCA-221ENST00000566889 FAM236DA0A1B0GTK5 79 aa17.6■□□□□ 0.41
FANCA-221ENST00000566889 AVPP01185 164 aa17.6■□□□□ 0.41
FANCA-221ENST00000566889 FAM236CP0DP71 79 aa17.6■□□□□ 0.41
FANCA-221ENST00000566889 SLURP1P55000 103 aa17.59■□□□□ 0.41
FANCA-221ENST00000566889 DEFB112Q30KQ8 113 aa17.59■□□□□ 0.41
FANCA-221ENST00000566889 UBL5Q9BZL1 73 aa17.59■□□□□ 0.41
FANCA-221ENST00000566889 IGHV3OR16-9A0A0B4J2B5 98 aa17.58■□□□□ 0.4
FANCA-221ENST00000566889 EPM2AB3EWF7 344 aa17.58■□□□□ 0.4
FANCA-221ENST00000566889 PTPRQQ9UMZ3 2332 aa17.58■□□□□ 0.4
FANCA-221ENST00000566889 PFN2P35080 140 aa17.57■□□□□ 0.4
FANCA-221ENST00000566889 XCL1P47992 114 aa17.57■□□□□ 0.4
FANCA-221ENST00000566889 ENHOQ6UWT2 76 aa17.57■□□□□ 0.4
FANCA-221ENST00000566889 XCL2Q9UBD3 114 aa17.57■□□□□ 0.4
FANCA-221ENST00000566889 A0A087WZ39 114 aa17.57■□□□□ 0.4
FANCA-221ENST00000566889 FAM19A1Q7Z5A9 133 aa17.57■□□□□ 0.4
FANCA-221ENST00000566889 C20orf197Q8N268 126 aa17.57■□□□□ 0.4
FANCA-221ENST00000566889 SPTA1P02549 2419 aa17.57■□□□□ 0.4
FANCA-221ENST00000566889 SERP1Q9Y6X1 66 aa17.56■□□□□ 0.4
FANCA-221ENST00000566889 Q8N814 137 aa17.56■□□□□ 0.4
FANCA-221ENST00000566889 B4DSR2 109 aa17.55■□□□□ 0.4
FANCA-221ENST00000566889 C1orf158Q8N1D5 194 aa17.55■□□□□ 0.4
FANCA-221ENST00000566889 WFDC9Q8NEX5 89 aa17.55■□□□□ 0.4
FANCA-221ENST00000566889 IGHV4-30-2A0A087WSY4 118 aa17.54■□□□□ 0.4
FANCA-221ENST00000566889 Q6ZTI0 123 aa17.54■□□□□ 0.4
FANCA-221ENST00000566889 TMEM86BQ8N661 226 aa17.53■□□□□ 0.4
FANCA-221ENST00000566889 DYNLRB2Q8TF09 96 aa17.53■□□□□ 0.4
FANCA-221ENST00000566889 CCL19Q99731 98 aa17.52■□□□□ 0.39
FANCA-221ENST00000566889 TRAV7A0A075B6U4 112 aa17.51■□□□□ 0.39
FANCA-221ENST00000566889 C19orf84I3L1E1 186 aa17.5■□□□□ 0.39
FANCA-221ENST00000566889 DEFB136Q30KP8 78 aa17.49■□□□□ 0.39
FANCA-221ENST00000566889 ZNF702PQ9H963 129 aa17.49■□□□□ 0.39
FANCA-221ENST00000566889 IGKV3OR2-268A0A0C4DH90 116 aa17.49■□□□□ 0.39
FANCA-221ENST00000566889 CELSR1Q9NYQ6 3014 aa17.49■□□□□ 0.39
FANCA-221ENST00000566889 A0A1W2PRX2 142 aa17.48■□□□□ 0.39
FANCA-221ENST00000566889 H7BZZ5 65 aa17.48■□□□□ 0.39
FANCA-221ENST00000566889 NBL1P41271 181 aa17.48■□□□□ 0.39
FANCA-221ENST00000566889 DEFB114Q30KQ6 69 aa17.48■□□□□ 0.39
FANCA-221ENST00000566889 STHQ8IWL8 128 aa17.48■□□□□ 0.39
FANCA-221ENST00000566889 C6orf226Q5I0X4 101 aa17.47■□□□□ 0.39
FANCA-221ENST00000566889 C11orf44Q8N8P7 122 aa17.47■□□□□ 0.39
FANCA-221ENST00000566889 NBASA2RRP1 2371 aa17.46■□□□□ 0.39
FANCA-221ENST00000566889 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.46■□□□□ 0.395e-8■■■■■ 37.6
FANCA-221ENST00000566889 RIF1Q5UIP0 2472 aaKnown RBP17.46■□□□□ 0.39
FANCA-221ENST00000566889 AKAP6Q13023 2319 aa17.46■□□□□ 0.39
FANCA-221ENST00000566889 IGLV4-60A0A075B6I1 120 aa17.45■□□□□ 0.38
FANCA-221ENST00000566889 C18orf65Q6ZTR6 163 aa17.45■□□□□ 0.38
FANCA-221ENST00000566889 NANOS2P60321 138 aaKnown RBP17.45■□□□□ 0.38
FANCA-221ENST00000566889 KLKP1Q107X0 134 aa17.45■□□□□ 0.38
FANCA-221ENST00000566889 PRO0628Q9UI54 55 aa17.44■□□□□ 0.38
FANCA-221ENST00000566889 A0A096LNT2 108 aa17.43■□□□□ 0.38
FANCA-221ENST00000566889 TRBV6-8A0A0A6YYG3 113 aa17.42■□□□□ 0.38
FANCA-221ENST00000566889 ODF3L2Q3SX64 289 aa17.41■□□□□ 0.38
FANCA-221ENST00000566889 NOP10Q9NPE3 64 aaKnown RBP17.41■□□□□ 0.38
FANCA-221ENST00000566889 Q8IZM0 81 aa17.4■□□□□ 0.38
FANCA-221ENST00000566889 C4orf3Q8WVX3 66 aa17.4■□□□□ 0.38
FANCA-221ENST00000566889 ZFHX2Q9C0A1 2572 aaPredicted RBP17.39■□□□□ 0.37
FANCA-221ENST00000566889 LOC110117498A0A087WWA1 95 aa17.39■□□□□ 0.37
FANCA-221ENST00000566889 LOC100131303A0A0U1RQF7 123 aa17.39■□□□□ 0.37
FANCA-221ENST00000566889 Q6ZQT0 140 aa17.39■□□□□ 0.37
FANCA-221ENST00000566889 LINC00482Q8N8I6 264 aa17.39■□□□□ 0.37
FANCA-221ENST00000566889 LINC00959A0A1B0GUT2 108 aa17.39■□□□□ 0.37
FANCA-221ENST00000566889 RBM3P98179 157 aaKnown RBP17.37■□□□□ 0.37
FANCA-221ENST00000566889 CREBBPQ92793 2442 aa17.37■□□□□ 0.37
FANCA-221ENST00000566889 TRGV2A0A075B6R0 118 aa17.37■□□□□ 0.37
FANCA-221ENST00000566889 SMIM26A0A096LP01 95 aa17.36■□□□□ 0.37
FANCA-221ENST00000566889 J3QLI3 93 aa17.36■□□□□ 0.37
FANCA-221ENST00000566889 C11orf68Q9H3H3 251 aaKnown RBP17.36■□□□□ 0.37
FANCA-221ENST00000566889 C16orf74Q96GX8 76 aa17.35■□□□□ 0.37
FANCA-221ENST00000566889 Q6YL49 198 aa17.35■□□□□ 0.37
FANCA-221ENST00000566889 LINC01356Q8N9X3 169 aa17.35■□□□□ 0.37
FANCA-221ENST00000566889 ZNF561-AS1K7EIQ3 104 aa17.34■□□□□ 0.37
FANCA-221ENST00000566889 LINC01547P58512 204 aaPredicted RBP17.34■□□□□ 0.37
FANCA-221ENST00000566889 HIVEP3Q5T1R4 2406 aa17.34■□□□□ 0.37
FANCA-221ENST00000566889 TRGV4A0A0C4DH28 118 aa17.33■□□□□ 0.37
FANCA-221ENST00000566889 COX17Q14061 63 aa17.33■□□□□ 0.36
FANCA-221ENST00000566889 LINC00336Q6ZUF6 198 aa17.32■□□□□ 0.36
FANCA-221ENST00000566889 NDUFC1O43677 76 aa17.32■□□□□ 0.36
FANCA-221ENST00000566889 DSCR9P59020 149 aa17.32■□□□□ 0.36
FANCA-221ENST00000566889 C6orf223Q8N319 242 aa17.32■□□□□ 0.36
FANCA-221ENST00000566889 CEP295Q9C0D2 2601 aa17.31■□□□□ 0.36
FANCA-221ENST00000566889 LINC00575Q6W349 94 aa17.31■□□□□ 0.36
FANCA-221ENST00000566889 RNASE1P07998 156 aaKnown RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms