RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 UPK3BQ9BT76 320 aa2.9□□□□□ -1.95
LINC00254-201ENST00000563416 DERL1Q9BUN8 251 aa2.9□□□□□ -1.95
LINC00254-201ENST00000563416 MAP1LC3AQ9H492 121 aa2.9□□□□□ -1.95
LINC00254-201ENST00000563416 PRO0255Q9UI72 69 aa2.9□□□□□ -1.95
LINC00254-201ENST00000563416 APOBP04114 4563 aaKnown RBP2.9□□□□□ -1.95
LINC00254-201ENST00000563416 LRP1BQ9NZR2 4599 aa2.9□□□□□ -1.95
LINC00254-201ENST00000563416 DNAH8Q96JB1 4490 aa2.89□□□□□ -1.95
LINC00254-201ENST00000563416 TRBV20OR9-2A0A075B6H5 130 aa2.89□□□□□ -1.95
LINC00254-201ENST00000563416 A0A0J9YY99 117 aa2.89□□□□□ -1.95
LINC00254-201ENST00000563416 A8MWL6 223 aa2.89□□□□□ -1.95
LINC00254-201ENST00000563416 B4DEV8 164 aa2.89□□□□□ -1.95
LINC00254-201ENST00000563416 H3BVH4 76 aa2.89□□□□□ -1.95
LINC00254-201ENST00000563416 IGHV3-53P01767 116 aa2.89□□□□□ -1.95
LINC00254-201ENST00000563416 SFTA3P0C7M3 94 aa2.89□□□□□ -1.95
LINC00254-201ENST00000563416 ASIPP42127 132 aa2.89□□□□□ -1.95
LINC00254-201ENST00000563416 CCL18P55774 89 aa2.89□□□□□ -1.95
LINC00254-201ENST00000563416 ESRGQ1W209 222 aa2.89□□□□□ -1.95
LINC00254-201ENST00000563416 CENPWQ5EE01 88 aa2.89□□□□□ -1.95
LINC00254-201ENST00000563416 CFAP126Q5VTH2 177 aa2.89□□□□□ -1.95
LINC00254-201ENST00000563416 ZFP2Q6ZN57 461 aa2.89□□□□□ -1.95
LINC00254-201ENST00000563416 LINC01551Q86U37 167 aa2.89□□□□□ -1.95
LINC00254-201ENST00000563416 BAGE2Q86Y30 109 aa2.89□□□□□ -1.95
LINC00254-201ENST00000563416 UBE2DNLQ8IWF7 75 aa2.89□□□□□ -1.95
LINC00254-201ENST00000563416 SND1-IT1Q9HBX3 110 aa2.89□□□□□ -1.95
LINC00254-201ENST00000563416 HHLA3Q9XRX5 114 aa2.89□□□□□ -1.95
LINC00254-201ENST00000563416 MRPS16Q9Y3D3 137 aaKnown RBP2.89□□□□□ -1.95
LINC00254-201ENST00000563416 LINC00588Q9Y4M8 146 aa2.89□□□□□ -1.95
LINC00254-201ENST00000563416 ICOSQ9Y6W8 199 aa2.89□□□□□ -1.95
LINC00254-201ENST00000563416 TRGV4A0A0C4DH28 118 aa2.88□□□□□ -1.95
LINC00254-201ENST00000563416 TRBV6-4A0A1B0GX49 114 aa2.88□□□□□ -1.95
LINC00254-201ENST00000563416 C19orf71A6NCJ1 209 aa2.88□□□□□ -1.95
LINC00254-201ENST00000563416 A8MWV9 139 aa2.88□□□□□ -1.95
LINC00254-201ENST00000563416 C9JCJ5 164 aa2.88□□□□□ -1.95
LINC00254-201ENST00000563416 C8orf87E5RJ46 101 aa2.88□□□□□ -1.95
LINC00254-201ENST00000563416 TMEM250H0YL14 139 aa2.88□□□□□ -1.95
LINC00254-201ENST00000563416 ARMS2P0C7Q2 107 aa2.88□□□□□ -1.95
LINC00254-201ENST00000563416 IGLC6P0CF74 106 aa2.88□□□□□ -1.95
LINC00254-201ENST00000563416 LINC00694P0DN24 101 aa2.88□□□□□ -1.95
LINC00254-201ENST00000563416 S100A4P26447 101 aaKnown RBP2.88□□□□□ -1.95
LINC00254-201ENST00000563416 GNG4P50150 75 aa2.88□□□□□ -1.95
LINC00254-201ENST00000563416 RPL19P84098 196 aaKnown RBP2.88□□□□□ -1.95
LINC00254-201ENST00000563416 SMAGPQ0VAQ4 97 aa2.88□□□□□ -1.95
LINC00254-201ENST00000563416 DEFB116Q30KQ4 102 aa2.88□□□□□ -1.95
LINC00254-201ENST00000563416 FA2HQ7L5A8 372 aa2.88□□□□□ -1.95
LINC00254-201ENST00000563416 NEGR1Q7Z3B1 354 aa2.88□□□□□ -1.95
LINC00254-201ENST00000563416 HSPG2P98160 4391 aa2.88□□□□□ -1.95
LINC00254-201ENST00000563416 IGLV2-18A0A075B6J9 118 aa2.87□□□□□ -1.95
LINC00254-201ENST00000563416 TMSB15BA0A087X1C1 80 aa2.87□□□□□ -1.95
LINC00254-201ENST00000563416 NBDYA0A0U1RRE5 68 aa2.87□□□□□ -1.95
LINC00254-201ENST00000563416 GRIFINA4D1Z8 144 aa2.87□□□□□ -1.95
LINC00254-201ENST00000563416 CRYGDP07320 174 aa2.87□□□□□ -1.95
LINC00254-201ENST00000563416 LINC00614P0C842 121 aa2.87□□□□□ -1.95
LINC00254-201ENST00000563416 MGST1P10620 155 aaKnown RBP2.87□□□□□ -1.95
LINC00254-201ENST00000563416 SRIP30626 198 aa2.87□□□□□ -1.95
LINC00254-201ENST00000563416 RHOHQ15669 191 aa2.87□□□□□ -1.95
LINC00254-201ENST00000563416 TEX261Q6UWH6 196 aa2.87□□□□□ -1.95
LINC00254-201ENST00000563416 LYPD5Q6UWN5 251 aa2.87□□□□□ -1.95
LINC00254-201ENST00000563416 PP632Q6XCG6 107 aa2.87□□□□□ -1.95
LINC00254-201ENST00000563416 ZFP82Q8N141 532 aa2.87□□□□□ -1.95
LINC00254-201ENST00000563416 CIRBP-AS1Q8TBR5 109 aa2.87□□□□□ -1.95
LINC00254-201ENST00000563416 SFRP2Q96HF1 295 aa2.87□□□□□ -1.95
LINC00254-201ENST00000563416 MED9Q9NWA0 146 aa2.87□□□□□ -1.95
LINC00254-201ENST00000563416 PHLDA3Q9Y5J5 127 aa2.87□□□□□ -1.95
LINC00254-201ENST00000563416 KIAA1109Q2LD37 5005 aa2.86□□□□□ -1.95
LINC00254-201ENST00000563416 IGLV4-69A0A075B6H9 119 aa2.86□□□□□ -1.95
LINC00254-201ENST00000563416 M0R2N4 97 aa2.86□□□□□ -1.95
LINC00254-201ENST00000563416 M0R381 172 aa2.86□□□□□ -1.95
LINC00254-201ENST00000563416 SRP19P09132 144 aaKnown RBP2.86□□□□□ -1.95
LINC00254-201ENST00000563416 MP68P56378 58 aa2.86□□□□□ -1.95
LINC00254-201ENST00000563416 RPS20P60866 119 aaKnown RBP2.86□□□□□ -1.95
LINC00254-201ENST00000563416 OR10AG1Q8NH19 301 aa2.86□□□□□ -1.95
LINC00254-201ENST00000563416 PRADC1Q9BSG0 188 aa2.86□□□□□ -1.95
LINC00254-201ENST00000563416 CNFNQ9BYD5 112 aa2.86□□□□□ -1.95
LINC00254-201ENST00000563416 BIN3Q9NQY0 253 aa2.86□□□□□ -1.95
LINC00254-201ENST00000563416 LY96Q9Y6Y9 160 aa2.86□□□□□ -1.95
LINC00254-201ENST00000563416 HERC2O95714 4834 aa2.85□□□□□ -1.95
LINC00254-201ENST00000563416 IGHV3-73A0A0B4J1V6 119 aa2.85□□□□□ -1.95
LINC00254-201ENST00000563416 TRBV10-1A0A0K0K1A3 114 aa2.85□□□□□ -1.95
LINC00254-201ENST00000563416 F2Z2F3 143 aa2.85□□□□□ -1.95
LINC00254-201ENST00000563416 K7EP13 123 aa2.85□□□□□ -1.95
LINC00254-201ENST00000563416 GZMBP10144 247 aa2.85□□□□□ -1.95
LINC00254-201ENST00000563416 KRTAP10-1P60331 282 aa2.85□□□□□ -1.95
LINC00254-201ENST00000563416 RAB4BP61018 213 aa2.85□□□□□ -1.95
LINC00254-201ENST00000563416 LUZP6Q538Z0 58 aa2.85□□□□□ -1.95
LINC00254-201ENST00000563416 C1orf134Q5TEV5 83 aa2.85□□□□□ -1.95
LINC00254-201ENST00000563416 Q5W150 140 aa2.85□□□□□ -1.95
LINC00254-201ENST00000563416 SCGB1D4Q6XE38 83 aa2.85□□□□□ -1.95
LINC00254-201ENST00000563416 Q6ZRN7 208 aaPredicted RBP2.85□□□□□ -1.95
LINC00254-201ENST00000563416 WFDC10BQ8IUB3 73 aa2.85□□□□□ -1.95
LINC00254-201ENST00000563416 FER1L6-AS1Q8NA97 138 aa2.85□□□□□ -1.95
LINC00254-201ENST00000563416 OR2D3Q8NGH3 330 aa2.85□□□□□ -1.95
LINC00254-201ENST00000563416 AP1S3Q96PC3 154 aa2.85□□□□□ -1.95
LINC00254-201ENST00000563416 SMIM7Q9BQ49 75 aa2.85□□□□□ -1.95
LINC00254-201ENST00000563416 EIF5A2Q9GZV4 153 aaKnown RBP2.85□□□□□ -1.95
LINC00254-201ENST00000563416 SMDT1Q9H4I9 107 aa2.85□□□□□ -1.95
LINC00254-201ENST00000563416 IGLV4-60A0A075B6I1 120 aa2.84□□□□□ -1.95
LINC00254-201ENST00000563416 ZNF727A8MUV8 499 aa2.84□□□□□ -1.95
LINC00254-201ENST00000563416 LINC01556Q5JQF7 62 aa2.84□□□□□ -1.95
LINC00254-201ENST00000563416 LCE1CQ5T751 118 aa2.84□□□□□ -1.95
LINC00254-201ENST00000563416 LCE1BQ5T7P3 118 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms