RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 FAM135AQ9P2D6 1515 aa-0.04□□□□□ -2.42
CHD9-204ENST00000561869 SHANK2Q9UPX8 1470 aa-0.04□□□□□ -2.42
CHD9-204ENST00000561869 SCAPERQ9BY12 1400 aa-0.04□□□□□ -2.42
CHD9-204ENST00000561869 NSD3Q9BZ95 1437 aa-0.04□□□□□ -2.42
CHD9-204ENST00000561869 TNXBP22105 4242 aa-0.05□□□□□ -2.42
CHD9-204ENST00000561869 NRKQ7Z2Y5 1582 aa-0.05□□□□□ -2.42
CHD9-204ENST00000561869 DIP2CQ9Y2E4 1556 aa-0.05□□□□□ -2.42
CHD9-204ENST00000561869 FAM24AA6NFZ4 105 aa-0.05□□□□□ -2.42
CHD9-204ENST00000561869 SNAPC5O75971 98 aa-0.05□□□□□ -2.42
CHD9-204ENST00000561869 SFT2D2O95562 160 aa-0.05□□□□□ -2.42
CHD9-204ENST00000561869 S100A3P33764 101 aa-0.05□□□□□ -2.42
CHD9-204ENST00000561869 UBE2D3P61077 147 aa-0.05□□□□□ -2.42
CHD9-204ENST00000561869 UBE2D2P62837 147 aa-0.05□□□□□ -2.42
CHD9-204ENST00000561869 PPP3R1P63098 170 aa-0.05□□□□□ -2.42
CHD9-204ENST00000561869 DCDP81605 110 aaKnown RBP-0.05□□□□□ -2.42
CHD9-204ENST00000561869 EHBP1L1Q8N3D4 1523 aa-0.05□□□□□ -2.42
CHD9-204ENST00000561869 UBR4Q5T4S7 5183 aa-0.05□□□□□ -2.42
CHD9-204ENST00000561869 PZPP20742 1482 aa-0.05□□□□□ -2.42
CHD9-204ENST00000561869 MRC2Q9UBG0 1479 aa-0.05□□□□□ -2.42
CHD9-204ENST00000561869 TET3O43151 1660 aa-0.05□□□□□ -2.42
CHD9-204ENST00000561869 PPRC1Q5VV67 1664 aaKnown RBP-0.05□□□□□ -2.42
CHD9-204ENST00000561869 PAPPAQ13219 1627 aa-0.05□□□□□ -2.42
CHD9-204ENST00000561869 C10orf142B7Z368 130 aa-0.06□□□□□ -2.42
CHD9-204ENST00000561869 H3BQ15 152 aa-0.06□□□□□ -2.42
CHD9-204ENST00000561869 CHKB-CPT1BH3BT56 60 aa-0.06□□□□□ -2.42
CHD9-204ENST00000561869 IFITM1P13164 125 aa-0.06□□□□□ -2.42
CHD9-204ENST00000561869 KRTAP20-1Q3LI63 56 aa-0.06□□□□□ -2.42
CHD9-204ENST00000561869 TMEM263Q8WUH6 116 aaKnown RBP-0.06□□□□□ -2.42
CHD9-204ENST00000561869 NXT2Q9NPJ8 142 aaKnown RBP-0.06□□□□□ -2.42
CHD9-204ENST00000561869 UQCR10Q9UDW1 63 aa-0.06□□□□□ -2.42
CHD9-204ENST00000561869 PRKDCP78527 4128 aaKnown RBP-0.06□□□□□ -2.42
CHD9-204ENST00000561869 SPHKAPQ2M3C7 1700 aa-0.07□□□□□ -2.42
CHD9-204ENST00000561869 ARHGAP5Q13017 1502 aa-0.07□□□□□ -2.42
CHD9-204ENST00000561869 TULP4Q9NRJ4 1543 aa-0.07□□□□□ -2.42
CHD9-204ENST00000561869 ALMS1Q8TCU4 4167 aa-0.07□□□□□ -2.42
CHD9-204ENST00000561869 RNF213Q63HN8 5207 aa-0.07□□□□□ -2.42
CHD9-204ENST00000561869 CFDP00746 253 aaPredicted RBP-0.07□□□□□ -2.42
CHD9-204ENST00000561869 MGPP08493 103 aa-0.07□□□□□ -2.42
CHD9-204ENST00000561869 IGLC1P0CG04 106 aa-0.07□□□□□ -2.42
CHD9-204ENST00000561869 SPRR1AP35321 89 aa-0.07□□□□□ -2.42
CHD9-204ENST00000561869 MRPS10P82664 201 aaKnown RBP-0.07□□□□□ -2.42
CHD9-204ENST00000561869 DEFB109BQ30KR1 87 aa-0.07□□□□□ -2.42
CHD9-204ENST00000561869 FAM223AQ8IWN6 122 aa-0.07□□□□□ -2.42
CHD9-204ENST00000561869 SVBPQ8N300 66 aa-0.07□□□□□ -2.42
CHD9-204ENST00000561869 DEFB123Q8N688 67 aa-0.07□□□□□ -2.42
CHD9-204ENST00000561869 GNG8Q9UK08 70 aa-0.07□□□□□ -2.42
CHD9-204ENST00000561869 SPTA1P02549 2419 aa-0.07□□□□□ -2.42
CHD9-204ENST00000561869 FLNAP21333 2647 aaKnown RBP-0.08□□□□□ -2.42
CHD9-204ENST00000561869 ATRQ13535 2644 aa-0.08□□□□□ -2.42
CHD9-204ENST00000561869 ADGRL2O95490 1459 aa-0.08□□□□□ -2.42
CHD9-204ENST00000561869 MAGI1Q96QZ7 1491 aaPredicted RBP-0.08□□□□□ -2.42
CHD9-204ENST00000561869 HSPG2P98160 4391 aa-0.08□□□□□ -2.42
CHD9-204ENST00000561869 SONP18583 2426 aaKnown RBP-0.08□□□□□ -2.42
CHD9-204ENST00000561869 TCHHQ07283 1943 aa-0.08□□□□□ -2.42
CHD9-204ENST00000561869 HIVEP1P15822 2718 aa-0.08□□□□□ -2.42
CHD9-204ENST00000561869 TRBV6-1A0A0K0K1D8 114 aa-0.08□□□□□ -2.42
CHD9-204ENST00000561869 NAP1L6A6NFF2 107 aa-0.08□□□□□ -2.42
CHD9-204ENST00000561869 GNG11P61952 73 aa-0.08□□□□□ -2.42
CHD9-204ENST00000561869 Q0VG73 95 aa-0.08□□□□□ -2.42
CHD9-204ENST00000561869 WHAMMP3Q1A5X7 153 aa-0.08□□□□□ -2.42
CHD9-204ENST00000561869 PIGYQ3MUY2 71 aa-0.08□□□□□ -2.42
CHD9-204ENST00000561869 LRP2P98164 4655 aa-0.08□□□□□ -2.42
CHD9-204ENST00000561869 KDM5AP29375 1690 aaKnown RBP-0.08□□□□□ -2.42
CHD9-204ENST00000561869 DCHS2Q6V1P9 2916 aa-0.09□□□□□ -2.42
CHD9-204ENST00000561869 RYR1P21817 5038 aa-0.09□□□□□ -2.42
CHD9-204ENST00000561869 COX6CP09669 75 aa-0.09□□□□□ -2.42
CHD9-204ENST00000561869 S100A1P23297 94 aa-0.09□□□□□ -2.42
CHD9-204ENST00000561869 C10orf113Q5VZT2 155 aa-0.09□□□□□ -2.42
CHD9-204ENST00000561869 PRO1854Q9UHT4 67 aa-0.09□□□□□ -2.42
CHD9-204ENST00000561869 ARL2-SNX15V9GYD0 113 aa-0.09□□□□□ -2.42
CHD9-204ENST00000561869 BTAF1O14981 1849 aa-0.09□□□□□ -2.42
CHD9-204ENST00000561869 ZFYVE16Q7Z3T8 1539 aa-0.09□□□□□ -2.42
CHD9-204ENST00000561869 ARHGEF12Q9NZN5 1544 aa-0.09□□□□□ -2.42
CHD9-204ENST00000561869 CSPG4Q6UVK1 2322 aa-0.09□□□□□ -2.42
CHD9-204ENST00000561869 URB1O60287 2271 aaKnown RBP-0.1□□□□□ -2.42
CHD9-204ENST00000561869 HECTD4Q9Y4D8 3996 aa-0.1□□□□□ -2.42
CHD9-204ENST00000561869 PEG3Q9GZU2 1588 aa-0.1□□□□□ -2.42
CHD9-204ENST00000561869 COL4A6Q14031 1691 aa-0.1□□□□□ -2.43
CHD9-204ENST00000561869 STAB2Q8WWQ8 2551 aa-0.1□□□□□ -2.43
CHD9-204ENST00000561869 TMEM262E9PQX1 116 aa-0.1□□□□□ -2.43
CHD9-204ENST00000561869 SPRR2DP22532 72 aa-0.1□□□□□ -2.43
CHD9-204ENST00000561869 HSD52Q0P140 79 aa-0.1□□□□□ -2.43
CHD9-204ENST00000561869 MANBALQ9NQG1 85 aa-0.1□□□□□ -2.43
CHD9-204ENST00000561869 FAIMQ9NVQ4 179 aa-0.1□□□□□ -2.43
CHD9-204ENST00000561869 CC2D2AQ9P2K1 1620 aa-0.1□□□□□ -2.43
CHD9-204ENST00000561869 MAP1BP46821 2468 aaKnown RBP-0.1□□□□□ -2.43
CHD9-204ENST00000561869 GAPVD1Q14C86 1478 aa-0.1□□□□□ -2.43
CHD9-204ENST00000561869 CHD8Q9HCK8 2581 aa-0.1□□□□□ -2.43
CHD9-204ENST00000561869 SCN7AQ01118 1682 aa-0.11□□□□□ -2.43
CHD9-204ENST00000561869 TOPAZ1Q8N9V7 1692 aa-0.11□□□□□ -2.43
CHD9-204ENST00000561869 ABCC5O15440 1437 aa-0.11□□□□□ -2.43
CHD9-204ENST00000561869 TOP2BQ02880 1626 aa-0.11□□□□□ -2.43
CHD9-204ENST00000561869 FAM223BA6NKX1 122 aa-0.11□□□□□ -2.43
CHD9-204ENST00000561869 PRM1P04553 51 aa-0.11□□□□□ -2.43
CHD9-204ENST00000561869 SAA2P0DJI9 122 aaPredicted RBP-0.11□□□□□ -2.43
CHD9-204ENST00000561869 COX6B1P14854 86 aa-0.11□□□□□ -2.43
CHD9-204ENST00000561869 LINC00846Q9NV44 126 aa-0.11□□□□□ -2.43
CHD9-204ENST00000561869 CHD1O14646 1710 aa-0.11□□□□□ -2.43
CHD9-204ENST00000561869 C1orf167Q5SNV9 1468 aa-0.11□□□□□ -2.43
CHD9-204ENST00000561869 EP300Q09472 2414 aaPredicted RBP-0.12□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 171.1 ms