RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 IGKV3D-7A0A0C4DH55 119 aa12.41□□□□□ -0.42
PTPN21-208ENST00000556564 Q6ZSN1 163 aa12.41□□□□□ -0.42
PTPN21-208ENST00000556564 CELA1Q9UNI1 258 aa12.41□□□□□ -0.42
PTPN21-208ENST00000556564 SORL1Q92673 2214 aa12.41□□□□□ -0.42
PTPN21-208ENST00000556564 TRAV23DV6A0A075B6W5 121 aa12.4□□□□□ -0.42
PTPN21-208ENST00000556564 JMJD7-PLA2G4BH0Y9G9 81 aa12.4□□□□□ -0.42
PTPN21-208ENST00000556564 BEAN1Q3B7T3 259 aa12.4□□□□□ -0.42
PTPN21-208ENST00000556564 IGLV4-60A0A075B6I1 120 aa12.39□□□□□ -0.43
PTPN21-208ENST00000556564 TRBV10-2A0A0K0K1G8 114 aa12.39□□□□□ -0.43
PTPN21-208ENST00000556564 WFDC10BQ8IUB3 73 aa12.39□□□□□ -0.43
PTPN21-208ENST00000556564 CYSRT1A8MQ03 144 aa12.38□□□□□ -0.43
PTPN21-208ENST00000556564 CNFNQ9BYD5 112 aa12.38□□□□□ -0.43
PTPN21-208ENST00000556564 LINC00694P0DN24 101 aa12.38□□□□□ -0.43
PTPN21-208ENST00000556564 A0A0B4J2C4 111 aa12.38□□□□□ -0.43
PTPN21-208ENST00000556564 C1orf134Q5TEV5 83 aa12.38□□□□□ -0.43
PTPN21-208ENST00000556564 C14orf132Q9NPU4 83 aa12.38□□□□□ -0.43
PTPN21-208ENST00000556564 HRCT1Q6UXD1 115 aa12.37□□□□□ -0.43
PTPN21-208ENST00000556564 CHCHD7Q9BUK0 85 aa12.37□□□□□ -0.43
PTPN21-208ENST00000556564 PLAC8L1A1L4L8 177 aa12.37□□□□□ -0.43
PTPN21-208ENST00000556564 CEP350Q5VT06 3117 aa12.37□□□□□ -0.43
PTPN21-208ENST00000556564 LYPD5Q6UWN5 251 aa12.37□□□□□ -0.43
PTPN21-208ENST00000556564 TAX1BP3O14907 124 aa12.36□□□□□ -0.43
PTPN21-208ENST00000556564 YPEL4Q96NS1 127 aa12.36□□□□□ -0.43
PTPN21-208ENST00000556564 C6orf99Q4VX62 202 aa12.36□□□□□ -0.43
PTPN21-208ENST00000556564 LINC00474Q9P2X8 69 aa12.36□□□□□ -0.43
PTPN21-208ENST00000556564 M0R378 163 aa12.36□□□□□ -0.43
PTPN21-208ENST00000556564 TCL1BO95988 128 aa12.35□□□□□ -0.43
PTPN21-208ENST00000556564 WFDC2Q14508 124 aa12.35□□□□□ -0.43
PTPN21-208ENST00000556564 ACYP1P07311 99 aa12.35□□□□□ -0.43
PTPN21-208ENST00000556564 CITED1Q99966 193 aa12.35□□□□□ -0.43
PTPN21-208ENST00000556564 COX6A2Q02221 97 aa12.34□□□□□ -0.43
PTPN21-208ENST00000556564 SBSPONQ8IVN8 264 aa12.34□□□□□ -0.43
PTPN21-208ENST00000556564 MYO18BQ8IUG5 2567 aa12.34□□□□□ -0.43
PTPN21-208ENST00000556564 UNQ6190/PRO20217Q6UXQ8 127 aa12.34□□□□□ -0.43
PTPN21-208ENST00000556564 USP17L23D6RBM5 183 aa12.34□□□□□ -0.43
PTPN21-208ENST00000556564 C9orf116Q5BN46 136 aaPredicted RBP12.34□□□□□ -0.43
PTPN21-208ENST00000556564 Q8IZM0 81 aa12.33□□□□□ -0.44
PTPN21-208ENST00000556564 LINC00242Q5T6M2 205 aa12.31□□□□□ -0.44
PTPN21-208ENST00000556564 C6orf223Q8N319 242 aa12.31□□□□□ -0.44
PTPN21-208ENST00000556564 IGLV9-49A0A0B4J1Y8 123 aa12.31□□□□□ -0.44
PTPN21-208ENST00000556564 IGIPA6NJ69 53 aa12.31□□□□□ -0.44
PTPN21-208ENST00000556564 M0QXV9 152 aa12.31□□□□□ -0.44
PTPN21-208ENST00000556564 PTH2Q96A98 100 aa12.3□□□□□ -0.44
PTPN21-208ENST00000556564 TEN1Q86WV5 123 aa12.3□□□□□ -0.44
PTPN21-208ENST00000556564 ZNF706Q9Y5V0 76 aaPredicted RBP12.3□□□□□ -0.44
PTPN21-208ENST00000556564 LRRK2Q5S007 2527 aa12.29□□□□□ -0.44
PTPN21-208ENST00000556564 COX17Q14061 63 aa12.29□□□□□ -0.44
PTPN21-208ENST00000556564 C5orf42Q9H799 3197 aa12.29□□□□□ -0.44
PTPN21-208ENST00000556564 FSHBP01225 129 aa12.29□□□□□ -0.44
PTPN21-208ENST00000556564 MDFIQ99750 246 aa12.29□□□□□ -0.44
PTPN21-208ENST00000556564 H3BT86 120 aa12.28□□□□□ -0.44
PTPN21-208ENST00000556564 A0A1B0GX51 115 aa12.28□□□□□ -0.44
PTPN21-208ENST00000556564 TRIAP1O43715 76 aa12.27□□□□□ -0.45
PTPN21-208ENST00000556564 POM121L12Q8N7R1 296 aa12.27□□□□□ -0.45
PTPN21-208ENST00000556564 JMJD1CQ15652 2540 aa12.26□□□□□ -0.45
PTPN21-208ENST00000556564 PCNTO95613 3336 aa12.26□□□□□ -0.45
PTPN21-208ENST00000556564 TIMM17BO60830 172 aa12.25□□□□□ -0.45
PTPN21-208ENST00000556564 TRBV30A0A0K0K1B3 111 aa12.25□□□□□ -0.45
PTPN21-208ENST00000556564 COX8CQ7Z4L0 72 aa12.25□□□□□ -0.45
PTPN21-208ENST00000556564 SPINK6Q6UWN8 80 aa12.25□□□□□ -0.45
PTPN21-208ENST00000556564 DHRS4-AS1Q9P1J3 65 aa12.25□□□□□ -0.45
PTPN21-208ENST00000556564 C11orf72Q8NBR9 251 aa12.24□□□□□ -0.45
PTPN21-208ENST00000556564 PDE6GP18545 87 aa12.24□□□□□ -0.45
PTPN21-208ENST00000556564 SMIM11BQ8TCY0 68 aa12.23□□□□□ -0.45
PTPN21-208ENST00000556564 ABCA12Q86UK0 2595 aa12.23□□□□□ -0.45
PTPN21-208ENST00000556564 SMIM1B2RUZ4 78 aa12.23□□□□□ -0.45
PTPN21-208ENST00000556564 MP68P56378 58 aa12.23□□□□□ -0.45
PTPN21-208ENST00000556564 CHKB-CPT1BH3BT56 60 aa12.23□□□□□ -0.45
PTPN21-208ENST00000556564 EGFEM1PQ0D2K5 195 aa12.22□□□□□ -0.45
PTPN21-208ENST00000556564 SCXQ7RTU7 201 aa12.22□□□□□ -0.45
PTPN21-208ENST00000556564 AGRNO00468 2067 aa12.22□□□□□ -0.45
PTPN21-208ENST00000556564 BPY2O14599 106 aa12.22□□□□□ -0.45
PTPN21-208ENST00000556564 ZNF73O43830 326 aaPredicted RBP12.22□□□□□ -0.45
PTPN21-208ENST00000556564 Q6ZQY7 126 aa12.21□□□□□ -0.46
PTPN21-208ENST00000556564 C3orf84H3BNL1 204 aa12.2□□□□□ -0.46
PTPN21-208ENST00000556564 ZFYVE26Q68DK2 2539 aa12.2□□□□□ -0.46
PTPN21-208ENST00000556564 URB1-AS1Q96HZ7 61 aa12.19□□□□□ -0.46
PTPN21-208ENST00000556564 IGKV4-1P06312 121 aa12.19□□□□□ -0.46
PTPN21-208ENST00000556564 LINC01556Q5JQF7 62 aa12.19□□□□□ -0.46
PTPN21-208ENST00000556564 PRR3P79522 188 aaKnown RBP12.19□□□□□ -0.46
PTPN21-208ENST00000556564 ESRGQ1W209 222 aa12.19□□□□□ -0.46
PTPN21-208ENST00000556564 PKD1L2Q7Z442 2459 aa12.18□□□□□ -0.46
PTPN21-208ENST00000556564 REG3GQ6UW15 175 aa12.18□□□□□ -0.46
PTPN21-208ENST00000556564 TEX49A0A1B0GTD5 131 aa12.18□□□□□ -0.46
PTPN21-208ENST00000556564 C1orf137Q5JT78 98 aa12.18□□□□□ -0.46
PTPN21-208ENST00000556564 RPL28P46779 137 aaKnown RBP12.17□□□□□ -0.46
PTPN21-208ENST00000556564 CCKP06307 115 aa12.17□□□□□ -0.46
PTPN21-208ENST00000556564 X6R8D5 127 aa12.17□□□□□ -0.46
PTPN21-208ENST00000556564 A0A1B0GUV1 79 aa12.17□□□□□ -0.46
PTPN21-208ENST00000556564 CSDC2Q9Y534 153 aaKnown RBP12.16□□□□□ -0.46
PTPN21-208ENST00000556564 ANKRD17O75179 2603 aaKnown RBP12.16□□□□□ -0.46
PTPN21-208ENST00000556564 CHD7Q9P2D1 2997 aa12.16□□□□□ -0.46
PTPN21-208ENST00000556564 TLN2Q9Y4G6 2542 aa12.15□□□□□ -0.46
PTPN21-208ENST00000556564 HTTP42858 3142 aa12.15□□□□□ -0.46
PTPN21-208ENST00000556564 A0A096LNT2 108 aa12.15□□□□□ -0.46
PTPN21-208ENST00000556564 FAM19A4Q96LR4 140 aa12.15□□□□□ -0.46
PTPN21-208ENST00000556564 TRBV10-3A0A0K0K1G6 114 aa12.14□□□□□ -0.47
PTPN21-208ENST00000556564 AMELXQ99217 191 aa12.14□□□□□ -0.47
PTPN21-208ENST00000556564 UPK3BQ9BT76 320 aa12.14□□□□□ -0.47
PTPN21-208ENST00000556564 FAM236AA0A1B0GUQ0 79 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 192.5 ms