RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 A0A087WX48 190 aa6.96□□□□□ -1.3
SRP54-208ENST00000555557 CCL18P55774 89 aa6.96□□□□□ -1.3
SRP54-208ENST00000555557 MRPS36P82909 103 aaKnown RBP6.96□□□□□ -1.3
SRP54-208ENST00000555557 LINC01545Q5VT33 79 aa6.96□□□□□ -1.3
SRP54-208ENST00000555557 SIGMAR1Q99720 223 aa6.96□□□□□ -1.3
SRP54-208ENST00000555557 TRAV12-1A0A0B4J245 112 aa6.95□□□□□ -1.3
SRP54-208ENST00000555557 A0A1B0GUV1 79 aa6.95□□□□□ -1.3
SRP54-208ENST00000555557 LCE2DQ5TA82 110 aaPredicted RBP6.95□□□□□ -1.3
SRP54-208ENST00000555557 LGALS9CQ6DKI2 356 aa6.95□□□□□ -1.3
SRP54-208ENST00000555557 CLPSL2Q6UWE3 100 aa6.95□□□□□ -1.3
SRP54-208ENST00000555557 MUC7Q8TAX7 377 aa6.95□□□□□ -1.3
SRP54-208ENST00000555557 TRAV13-1A0A0B4J241 112 aa6.95□□□□□ -1.3
SRP54-208ENST00000555557 ANGP03950 147 aaKnown RBP6.95□□□□□ -1.3
SRP54-208ENST00000555557 SMAGPQ0VAQ4 97 aa6.95□□□□□ -1.3
SRP54-208ENST00000555557 PAPPA-AS1Q5QFB9 102 aa6.95□□□□□ -1.3
SRP54-208ENST00000555557 C2orf91Q6ZV80 131 aa6.95□□□□□ -1.3
SRP54-208ENST00000555557 WWC2-AS2Q96NR7 200 aa6.95□□□□□ -1.3
SRP54-208ENST00000555557 TP73-AS1Q9UF72 201 aa6.95□□□□□ -1.3
SRP54-208ENST00000555557 H3BUT2 72 aa6.94□□□□□ -1.3
SRP54-208ENST00000555557 LINC00269Q8N2A0 174 aa6.94□□□□□ -1.3
SRP54-208ENST00000555557 IGLV4-69A0A075B6H9 119 aa6.93□□□□□ -1.3
SRP54-208ENST00000555557 A0A0J9YXV3 536 aa6.93□□□□□ -1.3
SRP54-208ENST00000555557 F8VRH5 84 aa6.93□□□□□ -1.3
SRP54-208ENST00000555557 SIVA1O15304 175 aa6.93□□□□□ -1.3
SRP54-208ENST00000555557 HSD52Q0P140 79 aa6.93□□□□□ -1.3
SRP54-208ENST00000555557 KLK12Q9UKR0 248 aa6.93□□□□□ -1.3
SRP54-208ENST00000555557 UBE2D1P51668 147 aa6.93□□□□□ -1.3
SRP54-208ENST00000555557 TCTAP57738 103 aa6.93□□□□□ -1.3
SRP54-208ENST00000555557 SPCS1Q9Y6A9 102 aa6.93□□□□□ -1.3
SRP54-208ENST00000555557 RYR3Q15413 4870 aa6.93□□□□□ -1.3
SRP54-208ENST00000555557 A0A1W2PPM0 123 aa6.92□□□□□ -1.3
SRP54-208ENST00000555557 C11orf86A6NJI1 115 aa6.92□□□□□ -1.3
SRP54-208ENST00000555557 J3QR89 54 aa6.92□□□□□ -1.3
SRP54-208ENST00000555557 DPM2O94777 84 aa6.92□□□□□ -1.3
SRP54-208ENST00000555557 IGKCP01834 107 aa6.92□□□□□ -1.3
SRP54-208ENST00000555557 FABP2P12104 132 aa6.92□□□□□ -1.3
SRP54-208ENST00000555557 TENM2Q9NT68 2774 aa6.92□□□□□ -1.3
SRP54-208ENST00000555557 COX6A2Q02221 97 aa6.91□□□□□ -1.3
SRP54-208ENST00000555557 UBE2DNLQ8IWF7 75 aa6.91□□□□□ -1.3
SRP54-208ENST00000555557 Q9H8V8 135 aa6.91□□□□□ -1.3
SRP54-208ENST00000555557 LINC00959A0A1B0GUT2 108 aa6.91□□□□□ -1.3
SRP54-208ENST00000555557 REG3AQ06141 175 aa6.91□□□□□ -1.3
SRP54-208ENST00000555557 LINC01556Q5JQF7 62 aa6.91□□□□□ -1.3
SRP54-208ENST00000555557 LINC00242Q5T6M2 205 aa6.91□□□□□ -1.3
SRP54-208ENST00000555557 MTURNQ8N3F0 131 aa6.91□□□□□ -1.3
SRP54-208ENST00000555557 UPK3BQ9BT76 320 aa6.91□□□□□ -1.3
SRP54-208ENST00000555557 CHAC1Q9BUX1 264 aa6.91□□□□□ -1.3
SRP54-208ENST00000555557 DNAH1Q9P2D7 4330 aa6.91□□□□□ -1.3
SRP54-208ENST00000555557 IGLV10-54A0A075B6I4 117 aa6.9□□□□□ -1.3
SRP54-208ENST00000555557 DNAH10OSP0CZ25 163 aa6.9□□□□□ -1.3
SRP54-208ENST00000555557 RPL24P83731 157 aaKnown RBP6.9□□□□□ -1.3
SRP54-208ENST00000555557 ENHOQ6UWT2 76 aa6.9□□□□□ -1.3
SRP54-208ENST00000555557 UBE2WQ96B02 151 aa6.9□□□□□ -1.3
SRP54-208ENST00000555557 PLNP26678 52 aa6.89□□□□□ -1.31
SRP54-208ENST00000555557 CASC10Q5T4H9 136 aa6.89□□□□□ -1.31
SRP54-208ENST00000555557 TMEM170BQ5T4T1 132 aa6.89□□□□□ -1.31
SRP54-208ENST00000555557 BOD1L2Q8IYS8 172 aa6.89□□□□□ -1.31
SRP54-208ENST00000555557 TINCRA0A1B0GVN0 87 aa6.89□□□□□ -1.31
SRP54-208ENST00000555557 GAGE12HA6NDE8 117 aa6.89□□□□□ -1.31
SRP54-208ENST00000555557 SMIM13P0DJ93 91 aa6.89□□□□□ -1.31
SRP54-208ENST00000555557 NFE4Q86UQ8 179 aa6.89□□□□□ -1.31
SRP54-208ENST00000555557 GEMIN7Q9H840 131 aaKnown RBP6.89□□□□□ -1.31
SRP54-208ENST00000555557 PRR34Q9NV39 138 aa6.89□□□□□ -1.31
SRP54-208ENST00000555557 ZNF22P17026 224 aaPredicted RBP6.88□□□□□ -1.31
SRP54-208ENST00000555557 XCL1P47992 114 aa6.88□□□□□ -1.31
SRP54-208ENST00000555557 CDKN2A-AS1Q9UH64 79 aa6.88□□□□□ -1.31
SRP54-208ENST00000555557 VPS13DQ5THJ4 4388 aa6.88□□□□□ -1.31
SRP54-208ENST00000555557 CRPP02741 224 aa6.88□□□□□ -1.31
SRP54-208ENST00000555557 CKS1BP61024 79 aa6.88□□□□□ -1.31
SRP54-208ENST00000555557 SS18Q15532 418 aa6.88□□□□□ -1.31
SRP54-208ENST00000555557 RAB37Q96AX2 223 aa6.88□□□□□ -1.31
SRP54-208ENST00000555557 IGHV3-64A0A075B6Q5 118 aa6.87□□□□□ -1.31
SRP54-208ENST00000555557 FAM19A3Q7Z5A8 133 aa6.87□□□□□ -1.31
SRP54-208ENST00000555557 CHCHD10Q8WYQ3 142 aaPredicted RBP6.87□□□□□ -1.31
SRP54-208ENST00000555557 F8W1H4 67 aa6.86□□□□□ -1.31
SRP54-208ENST00000555557 HERVK_113P63121 156 aa6.86□□□□□ -1.31
SRP54-208ENST00000555557 C5orf38Q86SI9 138 aa6.86□□□□□ -1.31
SRP54-208ENST00000555557 KRTAP1-5Q9BYS1 174 aa6.86□□□□□ -1.31
SRP54-208ENST00000555557 Q9HAA7 133 aa6.86□□□□□ -1.31
SRP54-208ENST00000555557 IGKV2D-26A0A0A0MRZ7 120 aa6.86□□□□□ -1.31
SRP54-208ENST00000555557 IGHV3OR16-9A0A0B4J2B5 98 aa6.86□□□□□ -1.31
SRP54-208ENST00000555557 SPINK8P0C7L1 97 aa6.86□□□□□ -1.31
SRP54-208ENST00000555557 NAA38Q9BRA0 125 aaKnown RBP6.86□□□□□ -1.31
SRP54-208ENST00000555557 IGLV5-45A0A087WSX0 123 aa6.85□□□□□ -1.31
SRP54-208ENST00000555557 TRAV8-3A0A0A6YYJ7 113 aa6.85□□□□□ -1.31
SRP54-208ENST00000555557 TMEM223A0PJW6 202 aa6.85□□□□□ -1.31
SRP54-208ENST00000555557 C3orf84H3BNL1 204 aa6.85□□□□□ -1.31
SRP54-208ENST00000555557 IBA57-AS1B1ANH7 110 aa6.84□□□□□ -1.31
SRP54-208ENST00000555557 NMUP48645 174 aa6.84□□□□□ -1.31
SRP54-208ENST00000555557 MIAQ16674 131 aa6.84□□□□□ -1.31
SRP54-208ENST00000555557 TTTY13Q9BZ97 58 aa6.84□□□□□ -1.31
SRP54-208ENST00000555557 SACSQ9NZJ4 4579 aa6.84□□□□□ -1.31
SRP54-208ENST00000555557 FOXI1Q12951 378 aa6.84□□□□□ -1.32
SRP54-208ENST00000555557 CD164L2Q6UWJ8 174 aa6.84□□□□□ -1.32
SRP54-208ENST00000555557 SPANXB1Q9NS25 103 aaPredicted RBP6.84□□□□□ -1.32
SRP54-208ENST00000555557 HIGD1BQ9P298 99 aa6.84□□□□□ -1.32
SRP54-208ENST00000555557 KMT2AQ03164 3969 aa6.83□□□□□ -1.32
SRP54-208ENST00000555557 RYR2Q92736 4967 aa6.83□□□□□ -1.32
SRP54-208ENST00000555557 IGKV2D-24A0A075B6R9 120 aa6.83□□□□□ -1.32
SRP54-208ENST00000555557 TRAV8-4A0A0B4J246 113 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms