RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 KDM5AP29375 1690 aaKnown RBP0.05□□□□□ -2.4
SCFD1-213ENST00000554776 SONP18583 2426 aaKnown RBP0.05□□□□□ -2.4
SCFD1-213ENST00000554776 LRRK2Q5S007 2527 aa0.05□□□□□ -2.4
SCFD1-213ENST00000554776 F6UZH7 168 aa0.05□□□□□ -2.4
SCFD1-213ENST00000554776 SPCS1Q9Y6A9 102 aa0.05□□□□□ -2.4
SCFD1-213ENST00000554776 LINC01558Q9Y6Z2 57 aa0.05□□□□□ -2.4
SCFD1-213ENST00000554776 NF1P21359 2839 aa0.05□□□□□ -2.4
SCFD1-213ENST00000554776 AKAP13Q12802 2813 aa0.05□□□□□ -2.4
SCFD1-213ENST00000554776 RNF213Q63HN8 5207 aa0.05□□□□□ -2.4
SCFD1-213ENST00000554776 NBEAQ8NFP9 2946 aa0.05□□□□□ -2.4
SCFD1-213ENST00000554776 EP300Q09472 2414 aaPredicted RBP0.05□□□□□ -2.4
SCFD1-213ENST00000554776 CREBBPQ92793 2442 aa0.05□□□□□ -2.4
SCFD1-213ENST00000554776 RYR3Q15413 4870 aa0.05□□□□□ -2.4
SCFD1-213ENST00000554776 NHSL1Q5SYE7 1610 aa0.05□□□□□ -2.4
SCFD1-213ENST00000554776 TGP01266 2768 aa0.05□□□□□ -2.4
SCFD1-213ENST00000554776 PRRC2CQ9Y520 2896 aaKnown RBP0.04□□□□□ -2.4
SCFD1-213ENST00000554776 AKAP6Q13023 2319 aa0.04□□□□□ -2.4
SCFD1-213ENST00000554776 ABCA13Q86UQ4 5058 aa0.04□□□□□ -2.4
SCFD1-213ENST00000554776 HMCN2Q8NDA2 5059 aa0.04□□□□□ -2.4
SCFD1-213ENST00000554776 COL12A1Q99715 3063 aa0.04□□□□□ -2.4
SCFD1-213ENST00000554776 FXYD6-FXYD2A0A087WZ82 144 aa0.04□□□□□ -2.4
SCFD1-213ENST00000554776 UBE2L5PA0A1B0GUS4 154 aa0.04□□□□□ -2.4
SCFD1-213ENST00000554776 APOC3P02656 99 aa0.04□□□□□ -2.4
SCFD1-213ENST00000554776 GNG11P61952 73 aa0.04□□□□□ -2.4
SCFD1-213ENST00000554776 UBE2L3P68036 154 aaKnown RBP0.04□□□□□ -2.4
SCFD1-213ENST00000554776 Q8IZM0 81 aa0.04□□□□□ -2.4
SCFD1-213ENST00000554776 DPH3P1Q9H4G8 78 aa0.04□□□□□ -2.4
SCFD1-213ENST00000554776 TP53AIP1Q9HCN2 124 aa0.04□□□□□ -2.4
SCFD1-213ENST00000554776 GNG8Q9UK08 70 aa0.04□□□□□ -2.4
SCFD1-213ENST00000554776 TCHHQ07283 1943 aa0.04□□□□□ -2.4
SCFD1-213ENST00000554776 TACC2O95359 2948 aa0.04□□□□□ -2.4
SCFD1-213ENST00000554776 GVINP1Q7Z2Y8 2422 aa0.04□□□□□ -2.4
SCFD1-213ENST00000554776 CCDC168Q8NDH2 2452 aa0.04□□□□□ -2.4
SCFD1-213ENST00000554776 BTAF1O14981 1849 aa0.03□□□□□ -2.4
SCFD1-213ENST00000554776 KALRNO60229 2985 aa0.03□□□□□ -2.4
SCFD1-213ENST00000554776 CENPEQ02224 2701 aa0.03□□□□□ -2.4
SCFD1-213ENST00000554776 ARHGEF5Q12774 1597 aa0.03□□□□□ -2.4
SCFD1-213ENST00000554776 HYDINQ4G0P3 5121 aa0.03□□□□□ -2.4
SCFD1-213ENST00000554776 SRCAPQ6ZRS2 3230 aa0.03□□□□□ -2.4
SCFD1-213ENST00000554776 SPG11Q96JI7 2443 aa0.03□□□□□ -2.4
SCFD1-213ENST00000554776 LAMA3Q16787 3333 aa0.03□□□□□ -2.4
SCFD1-213ENST00000554776 TLN1Q9Y490 2541 aaKnown RBP0.03□□□□□ -2.4
SCFD1-213ENST00000554776 NBPF19A0A087WUL8 3843 aa0.03□□□□□ -2.4
SCFD1-213ENST00000554776 FAM24AA6NFZ4 105 aa0.03□□□□□ -2.4
SCFD1-213ENST00000554776 CORTO00230 105 aa0.03□□□□□ -2.4
SCFD1-213ENST00000554776 SFT2D2O95562 160 aa0.03□□□□□ -2.4
SCFD1-213ENST00000554776 GNG4P50150 75 aa0.03□□□□□ -2.4
SCFD1-213ENST00000554776 PPP3R1P63098 170 aa0.03□□□□□ -2.4
SCFD1-213ENST00000554776 WFDC2Q14508 124 aa0.03□□□□□ -2.4
SCFD1-213ENST00000554776 SFTA2Q6UW10 78 aa0.03□□□□□ -2.4
SCFD1-213ENST00000554776 SVBPQ8N300 66 aa0.03□□□□□ -2.4
SCFD1-213ENST00000554776 C2orf88Q9BSF0 95 aa0.03□□□□□ -2.4
SCFD1-213ENST00000554776 CEP295Q9C0D2 2601 aa0.03□□□□□ -2.4
SCFD1-213ENST00000554776 FLNCQ14315 2725 aa0.03□□□□□ -2.4
SCFD1-213ENST00000554776 SRRM2Q9UQ35 2752 aaKnown RBP0.03□□□□□ -2.41
SCFD1-213ENST00000554776 HERC2O95714 4834 aa0.03□□□□□ -2.41
SCFD1-213ENST00000554776 EPPK1P58107 5090 aaKnown RBP0.03□□□□□ -2.41
SCFD1-213ENST00000554776 FAT3Q8TDW7 4589 aa0.03□□□□□ -2.41
SCFD1-213ENST00000554776 BIRC6Q9NR09 4857 aa0.02□□□□□ -2.41
SCFD1-213ENST00000554776 TEX15Q9BXT5 2789 aa0.02□□□□□ -2.41
SCFD1-213ENST00000554776 PKD1L1Q8TDX9 2849 aa0.02□□□□□ -2.41
SCFD1-213ENST00000554776 LAMA2P24043 3122 aaKnown RBP0.02□□□□□ -2.41
SCFD1-213ENST00000554776 DSTQ03001 7570 aaKnown RBP0.02□□□□□ -2.41
SCFD1-213ENST00000554776 LOC285095A0A1B0GVY8 99 aa0.02□□□□□ -2.41
SCFD1-213ENST00000554776 S100A3P33764 101 aa0.02□□□□□ -2.41
SCFD1-213ENST00000554776 FLNBO75369 2602 aaKnown RBP0.02□□□□□ -2.41
SCFD1-213ENST00000554776 ITPR2Q14571 2701 aa0.02□□□□□ -2.41
SCFD1-213ENST00000554776 C10orf71Q711Q0 1435 aa0.02□□□□□ -2.41
SCFD1-213ENST00000554776 SCAPERQ9BY12 1400 aa0.02□□□□□ -2.41
SCFD1-213ENST00000554776 ZFHX3Q15911 3703 aa0.02□□□□□ -2.41
SCFD1-213ENST00000554776 EP400Q96L91 3159 aa0.02□□□□□ -2.41
SCFD1-213ENST00000554776 CEP250Q9BV73 2442 aa0.02□□□□□ -2.41
SCFD1-213ENST00000554776 UNC80Q8N2C7 3258 aa0.02□□□□□ -2.41
SCFD1-213ENST00000554776 TET3O43151 1660 aa0.02□□□□□ -2.41
SCFD1-213ENST00000554776 TLN2Q9Y4G6 2542 aa0.02□□□□□ -2.41
SCFD1-213ENST00000554776 MUC12Q9UKN1 5478 aa0.01□□□□□ -2.41
SCFD1-213ENST00000554776 PIEZO2Q9H5I5 2752 aa0.01□□□□□ -2.41
SCFD1-213ENST00000554776 LYSTQ99698 3801 aa0.01□□□□□ -2.41
SCFD1-213ENST00000554776 KMT2AQ03164 3969 aa0.01□□□□□ -2.41
SCFD1-213ENST00000554776 USF3Q68DE3 2245 aa0.01□□□□□ -2.41
SCFD1-213ENST00000554776 I3L2K1 104 aa0.01□□□□□ -2.41
SCFD1-213ENST00000554776 DEFB109BQ30KR1 87 aa0.01□□□□□ -2.41
SCFD1-213ENST00000554776 MANBALQ9NQG1 85 aa0.01□□□□□ -2.41
SCFD1-213ENST00000554776 UQCR10Q9UDW1 63 aa0.01□□□□□ -2.41
SCFD1-213ENST00000554776 IER3IP1Q9Y5U9 82 aa0.01□□□□□ -2.41
SCFD1-213ENST00000554776 ARL2-SNX15V9GYD0 113 aa0.01□□□□□ -2.41
SCFD1-213ENST00000554776 EIF4G3O43432 1585 aaKnown RBP0.01□□□□□ -2.41
SCFD1-213ENST00000554776 MYOM1P52179 1685 aa0.01□□□□□ -2.41
SCFD1-213ENST00000554776 PPRC1Q5VV67 1664 aaKnown RBP0.01□□□□□ -2.41
SCFD1-213ENST00000554776 CUBNO60494 3623 aa0.01□□□□□ -2.41
SCFD1-213ENST00000554776 BOD1L1Q8NFC6 3051 aa0□□□□□ -2.41
SCFD1-213ENST00000554776 DCHS1Q96JQ0 3298 aa0□□□□□ -2.41
SCFD1-213ENST00000554776 RELNP78509 3460 aa0□□□□□ -2.41
SCFD1-213ENST00000554776 MYO15AQ9UKN7 3530 aa0□□□□□ -2.41
SCFD1-213ENST00000554776 ZFHX4Q86UP3 3567 aa0□□□□□ -2.41
SCFD1-213ENST00000554776 FAM186AA6NE01 2351 aa0□□□□□ -2.41
SCFD1-213ENST00000554776 IGLC1P0CG04 106 aa0□□□□□ -2.41
SCFD1-213ENST00000554776 MTORP42345 2549 aa0□□□□□ -2.41
SCFD1-213ENST00000554776 MT4P47944 62 aa0□□□□□ -2.41
SCFD1-213ENST00000554776 LRP2P98164 4655 aa0□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 557 ms