RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 FAM19A2Q8N3H0 131 aa14.11□□□□□ -0.15
NEK3-202ENST00000550841 CST9LQ9H4G1 147 aa14.11□□□□□ -0.15
NEK3-202ENST00000550841 FAT2Q9NYQ8 4349 aa14.11□□□□□ -0.15
NEK3-202ENST00000550841 MALP21145 153 aa14.1□□□□□ -0.15
NEK3-202ENST00000550841 LINC00242Q5T6M2 205 aa14.1□□□□□ -0.15
NEK3-202ENST00000550841 FAM19A3Q7Z5A8 133 aa14.1□□□□□ -0.15
NEK3-202ENST00000550841 IGHV1-58A0A0C4DH39 117 aa14.09□□□□□ -0.15
NEK3-202ENST00000550841 LINC00310P59036 64 aa14.09□□□□□ -0.15
NEK3-202ENST00000550841 HECTD4Q9Y4D8 3996 aa14.08□□□□□ -0.16
NEK3-202ENST00000550841 IGHV3OR16-9A0A0B4J2B5 98 aa14.08□□□□□ -0.16
NEK3-202ENST00000550841 APOMO95445 188 aa14.08□□□□□ -0.16
NEK3-202ENST00000550841 PRSS1P07477 247 aa14.08□□□□□ -0.16
NEK3-202ENST00000550841 NDUFA6P56556 154 aa14.08□□□□□ -0.16
NEK3-202ENST00000550841 C5orf38Q86SI9 138 aa14.08□□□□□ -0.16
NEK3-202ENST00000550841 IFI27L1Q96BM0 104 aa14.08□□□□□ -0.16
NEK3-202ENST00000550841 NUPR1O60356 82 aa14.07□□□□□ -0.16
NEK3-202ENST00000550841 LEPROTL1O95214 131 aa14.07□□□□□ -0.16
NEK3-202ENST00000550841 HERVK_113P63121 156 aa14.07□□□□□ -0.16
NEK3-202ENST00000550841 GEMIN7Q9H840 131 aaKnown RBP14.07□□□□□ -0.16
NEK3-202ENST00000550841 hDV102S1A0JD36 115 aa14.06□□□□□ -0.16
NEK3-202ENST00000550841 KRTAP10-2P60368 255 aa14.06□□□□□ -0.16
NEK3-202ENST00000550841 HSPB8Q9UJY1 196 aa14.06□□□□□ -0.16
NEK3-202ENST00000550841 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.05□□□□□ -0.16
NEK3-202ENST00000550841 IGLV5-52A0A0A0MRZ9 124 aa14.05□□□□□ -0.16
NEK3-202ENST00000550841 TINCRA0A1B0GVN0 87 aa14.05□□□□□ -0.16
NEK3-202ENST00000550841 COX6A2Q02221 97 aa14.05□□□□□ -0.16
NEK3-202ENST00000550841 COA6Q5JTJ3 125 aaKnown RBP14.05□□□□□ -0.16
NEK3-202ENST00000550841 LINC01561Q8N1V8 128 aa14.05□□□□□ -0.16
NEK3-202ENST00000550841 KIAA1109Q2LD37 5005 aa14.04□□□□□ -0.16
NEK3-202ENST00000550841 A0A087WZ39 114 aa14.04□□□□□ -0.16
NEK3-202ENST00000550841 C15orf56Q8N910 161 aa14.04□□□□□ -0.16
NEK3-202ENST00000550841 GVQW2A0A096LPI5 108 aaPredicted RBP14.03□□□□□ -0.16
NEK3-202ENST00000550841 A0A0J9YXV3 536 aa14.03□□□□□ -0.16
NEK3-202ENST00000550841 C16orf90A8MZG2 172 aa14.03□□□□□ -0.16
NEK3-202ENST00000550841 TRAV12-1A0A0B4J245 112 aa14.02□□□□□ -0.17
NEK3-202ENST00000550841 ZNF561-AS1K7EIQ3 104 aa14.02□□□□□ -0.17
NEK3-202ENST00000550841 PACRGQ96M98 296 aaPredicted RBP14.02□□□□□ -0.17
NEK3-202ENST00000550841 PCLOQ9Y6V0 5065 aa14.01□□□□□ -0.17
NEK3-202ENST00000550841 FABP4P15090 132 aa14.01□□□□□ -0.17
NEK3-202ENST00000550841 HIGD2BQ4VC39 106 aa14.01□□□□□ -0.17
NEK3-202ENST00000550841 IGHV3-64A0A075B6Q5 118 aa14□□□□□ -0.17
NEK3-202ENST00000550841 TRAV16A0A0A6YYK6 109 aaPredicted RBP14□□□□□ -0.17
NEK3-202ENST00000550841 OR10D4PQ8NGN7 298 aa14□□□□□ -0.17
NEK3-202ENST00000550841 GCSHP23434 173 aa13.99□□□□□ -0.17
NEK3-202ENST00000550841 IGLC3P0DOY3 106 aa13.98□□□□□ -0.17
NEK3-202ENST00000550841 CNBPP62633 177 aaKnown RBP13.98□□□□□ -0.17
NEK3-202ENST00000550841 LINC00469Q8N7U9 141 aa13.98□□□□□ -0.17
NEK3-202ENST00000550841 CDKN2A-AS1Q9UH64 79 aa13.98□□□□□ -0.17
NEK3-202ENST00000550841 CHTOPQ9Y3Y2 248 aaKnown RBP13.98□□□□□ -0.17
NEK3-202ENST00000550841 PKD1P98161 4303 aa13.98□□□□□ -0.17
NEK3-202ENST00000550841 IGLV5-45A0A087WSX0 123 aa13.97□□□□□ -0.17
NEK3-202ENST00000550841 H3BRM9 83 aa13.97□□□□□ -0.17
NEK3-202ENST00000550841 FUSP35637 526 aaKnown RBP eCLIP13.97□□□□□ -0.17
NEK3-202ENST00000550841 ORAOV1Q8WV07 137 aa13.97□□□□□ -0.17
NEK3-202ENST00000550841 F8WDY8 70 aa13.96□□□□□ -0.17
NEK3-202ENST00000550841 MAP1LC3CQ9BXW4 147 aa13.96□□□□□ -0.17
NEK3-202ENST00000550841 DNAH11Q96DT5 4516 aa13.95□□□□□ -0.18
NEK3-202ENST00000550841 S100A6P06703 90 aa13.95□□□□□ -0.18
NEK3-202ENST00000550841 SPAG11BQ08648 103 aa13.95□□□□□ -0.18
NEK3-202ENST00000550841 C2orf48Q96LS8 159 aa13.95□□□□□ -0.18
NEK3-202ENST00000550841 CHAC1Q9BUX1 264 aa13.95□□□□□ -0.18
NEK3-202ENST00000550841 C9orf163Q8N9P6 203 aa13.94□□□□□ -0.18
NEK3-202ENST00000550841 IGLV4-69A0A075B6H9 119 aa13.93□□□□□ -0.18
NEK3-202ENST00000550841 F8VRH5 84 aa13.93□□□□□ -0.18
NEK3-202ENST00000550841 H0Y8G0 127 aa13.92□□□□□ -0.18
NEK3-202ENST00000550841 SLPIP03973 132 aa13.92□□□□□ -0.18
NEK3-202ENST00000550841 PRSS2P07478 247 aa13.92□□□□□ -0.18
NEK3-202ENST00000550841 SYCNQ0VAF6 134 aa13.92□□□□□ -0.18
NEK3-202ENST00000550841 LINC00526Q96FQ7 95 aa13.91□□□□□ -0.18
NEK3-202ENST00000550841 CAMK2N2Q96S95 79 aa13.91□□□□□ -0.18
NEK3-202ENST00000550841 MRPL35Q9NZE8 188 aaKnown RBP13.91□□□□□ -0.18
NEK3-202ENST00000550841 ZNF22P17026 224 aaPredicted RBP13.9□□□□□ -0.18
NEK3-202ENST00000550841 ODF1Q14990 250 aa13.9□□□□□ -0.18
NEK3-202ENST00000550841 C11orf86A6NJI1 115 aa13.89□□□□□ -0.19
NEK3-202ENST00000550841 C6orf226Q5I0X4 101 aa13.89□□□□□ -0.19
NEK3-202ENST00000550841 TMEM170BQ5T4T1 132 aa13.89□□□□□ -0.19
NEK3-202ENST00000550841 Q8IZM0 81 aa13.89□□□□□ -0.19
NEK3-202ENST00000550841 CARD19Q96LW7 228 aa13.89□□□□□ -0.19
NEK3-202ENST00000550841 PKIGQ9Y2B9 76 aa13.89□□□□□ -0.19
NEK3-202ENST00000550841 SMIM1B2RUZ4 78 aa13.88□□□□□ -0.19
NEK3-202ENST00000550841 NDUFA1O15239 70 aa13.88□□□□□ -0.19
NEK3-202ENST00000550841 KRTAP10-1P60331 282 aa13.88□□□□□ -0.19
NEK3-202ENST00000550841 KIAA0087Q14695 138 aa13.88□□□□□ -0.19
NEK3-202ENST00000550841 TOMM7Q9P0U1 55 aa13.88□□□□□ -0.19
NEK3-202ENST00000550841 SYS1-DBNDD2H3BUS1 97 aa13.87□□□□□ -0.19
NEK3-202ENST00000550841 PLNP26678 52 aa13.87□□□□□ -0.19
NEK3-202ENST00000550841 S100A2P29034 98 aa13.87□□□□□ -0.19
NEK3-202ENST00000550841 PKHD1P08F94 4074 aa13.86□□□□□ -0.19
NEK3-202ENST00000550841 SPINK8P0C7L1 97 aa13.86□□□□□ -0.19
NEK3-202ENST00000550841 CKS1BP61024 79 aa13.86□□□□□ -0.19
NEK3-202ENST00000550841 RNF151Q2KHN1 245 aa13.86□□□□□ -0.19
NEK3-202ENST00000550841 PET117Q6UWS5 81 aa13.86□□□□□ -0.19
NEK3-202ENST00000550841 LINC01620Q4KN68 170 aa13.85□□□□□ -0.19
NEK3-202ENST00000550841 DPM2O94777 84 aa13.84□□□□□ -0.19
NEK3-202ENST00000550841 CXCL5P42830 114 aa13.84□□□□□ -0.19
NEK3-202ENST00000550841 SDIM1Q6ZPB5 146 aa13.84□□□□□ -0.19
NEK3-202ENST00000550841 Q6ZRU5 148 aa13.84□□□□□ -0.19
NEK3-202ENST00000550841 HIST3H2BBQ8N257 126 aa13.84□□□□□ -0.19
NEK3-202ENST00000550841 COX7B2Q8TF08 81 aa13.84□□□□□ -0.19
NEK3-202ENST00000550841 DYNC1H1Q14204 4646 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms