RNA–Protein interactions for RNA: ENST00000540638.6

EPB41L3-204, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EPB41L3, Length 3,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-204ENST00000540638 LINC00158P58513 81 aa12.14□□□□□ -0.47
EPB41L3-204ENST00000540638 EIF4EBP3O60516 100 aaPredicted RBP12.14□□□□□ -0.47
EPB41L3-204ENST00000540638 RPL13AP40429 203 aaKnown RBP12.14□□□□□ -0.47
EPB41L3-204ENST00000540638 FAM222AQ5U5X8 452 aa12.14□□□□□ -0.47
EPB41L3-204ENST00000540638 IGLV4-60A0A075B6I1 120 aa12.13□□□□□ -0.47
EPB41L3-204ENST00000540638 IGHV3-33P01772 117 aa12.13□□□□□ -0.47
EPB41L3-204ENST00000540638 COX6CP09669 75 aa12.13□□□□□ -0.47
EPB41L3-204ENST00000540638 CLEC2BQ92478 149 aa12.13□□□□□ -0.47
EPB41L3-204ENST00000540638 F5H768 121 aa12.12□□□□□ -0.47
EPB41L3-204ENST00000540638 C19orf73Q9NVV2 129 aa12.12□□□□□ -0.47
EPB41L3-204ENST00000540638 PIK3CD-AS1Q5SR53 167 aa12.11□□□□□ -0.47
EPB41L3-204ENST00000540638 CDC42SE2Q9NRR3 84 aa12.11□□□□□ -0.47
EPB41L3-204ENST00000540638 PAX4O43316 350 aa12.1□□□□□ -0.47
EPB41L3-204ENST00000540638 SLC25A20O43772 301 aa12.1□□□□□ -0.47
EPB41L3-204ENST00000540638 ATP6V0E2Q8NHE4 81 aa12.1□□□□□ -0.47
EPB41L3-204ENST00000540638 OR13C6PQ8NH95 151 aa12.09□□□□□ -0.47
EPB41L3-204ENST00000540638 DAD1P61803 113 aa12.09□□□□□ -0.47
EPB41L3-204ENST00000540638 FHL2Q14192 279 aa12.09□□□□□ -0.47
EPB41L3-204ENST00000540638 MIAQ16674 131 aa12.09□□□□□ -0.47
EPB41L3-204ENST00000540638 ZFAND6Q6FIF0 208 aa12.09□□□□□ -0.47
EPB41L3-204ENST00000540638 TRIAP1O43715 76 aa12.09□□□□□ -0.47
EPB41L3-204ENST00000540638 PLAC8L1A1L4L8 177 aa12.08□□□□□ -0.48
EPB41L3-204ENST00000540638 C6orf226Q5I0X4 101 aa12.08□□□□□ -0.48
EPB41L3-204ENST00000540638 AKAP9Q99996 3911 aa12.08□□□□□ -0.48
EPB41L3-204ENST00000540638 GAGE12HA6NDE8 117 aa12.08□□□□□ -0.48
EPB41L3-204ENST00000540638 TRBV6-8A0A0A6YYG3 113 aa12.07□□□□□ -0.48
EPB41L3-204ENST00000540638 A0A1B0GV72 72 aa12.07□□□□□ -0.48
EPB41L3-204ENST00000540638 TRBV20-1A0A075B6N2 111 aa12.07□□□□□ -0.48
EPB41L3-204ENST00000540638 SMIM1B2RUZ4 78 aa12.07□□□□□ -0.48
EPB41L3-204ENST00000540638 ANKRD29Q8N6D5 301 aa12.07□□□□□ -0.48
EPB41L3-204ENST00000540638 C9orf66Q5T8R8 295 aa12.07□□□□□ -0.48
EPB41L3-204ENST00000540638 NTN5Q8WTR8 489 aaPredicted RBP12.07□□□□□ -0.48
EPB41L3-204ENST00000540638 KMT2BQ9UMN6 2715 aaPredicted RBP12.07□□□□□ -0.48
EPB41L3-204ENST00000540638 TRBV6-4A0A1B0GX49 114 aa12.06□□□□□ -0.48
EPB41L3-204ENST00000540638 SMCPP49901 116 aaPredicted RBP12.06□□□□□ -0.48
EPB41L3-204ENST00000540638 COL6A5A8TX70 2615 aa12.06□□□□□ -0.48
EPB41L3-204ENST00000540638 CRYBA4P53673 196 aa12.06□□□□□ -0.48
EPB41L3-204ENST00000540638 EDA2RQ9HAV5 297 aa12.06□□□□□ -0.48
EPB41L3-204ENST00000540638 ICOSQ9Y6W8 199 aa12.06□□□□□ -0.48
EPB41L3-204ENST00000540638 CSNK1G2-AS1Q8NCQ2 148 aa12.05□□□□□ -0.48
EPB41L3-204ENST00000540638 ANGP03950 147 aaKnown RBP12.05□□□□□ -0.48
EPB41L3-204ENST00000540638 TIRAPP58753 221 aa12.05□□□□□ -0.48
EPB41L3-204ENST00000540638 ATXN8Q156A1 80 aa12.05□□□□□ -0.48
EPB41L3-204ENST00000540638 SIGMAR1Q99720 223 aa12.05□□□□□ -0.48
EPB41L3-204ENST00000540638 FOXI1Q12951 378 aa12.04□□□□□ -0.48
EPB41L3-204ENST00000540638 C2orf82Q6UX34 121 aa12.04□□□□□ -0.48
EPB41L3-204ENST00000540638 CLUHP3Q96NS8 147 aa12.04□□□□□ -0.48
EPB41L3-204ENST00000540638 TRAV26-1A0A087WT03 109 aa12.04□□□□□ -0.48
EPB41L3-204ENST00000540638 OXLD1Q5BKU9 147 aa12.04□□□□□ -0.48
EPB41L3-204ENST00000540638 Q8N3U1 123 aa12.04□□□□□ -0.48
EPB41L3-204ENST00000540638 MIR7-3HGQ8N6C7 128 aa12.04□□□□□ -0.48
EPB41L3-204ENST00000540638 LINC00308Q8TCZ7 52 aa12.03□□□□□ -0.48
EPB41L3-204ENST00000540638 A0A0B4J2C4 111 aa12.03□□□□□ -0.48
EPB41L3-204ENST00000540638 FAM110AQ9BQ89 295 aa12.03□□□□□ -0.48
EPB41L3-204ENST00000540638 PRO0461Q9UI25 63 aa12.03□□□□□ -0.48
EPB41L3-204ENST00000540638 NDUFA1O15239 70 aa12.02□□□□□ -0.48
EPB41L3-204ENST00000540638 LITAFQ99732 161 aa12.02□□□□□ -0.49
EPB41L3-204ENST00000540638 LINC01620Q4KN68 170 aa12.02□□□□□ -0.49
EPB41L3-204ENST00000540638 IL17DQ8TAD2 202 aa12.02□□□□□ -0.49
EPB41L3-204ENST00000540638 COX7B2Q8TF08 81 aa12.02□□□□□ -0.49
EPB41L3-204ENST00000540638 PRO0255Q9UI72 69 aa12.01□□□□□ -0.49
EPB41L3-204ENST00000540638 IGHV4-28A0A0C4DH34 117 aa12.01□□□□□ -0.49
EPB41L3-204ENST00000540638 NBEAL1Q6ZS30 2694 aa12.01□□□□□ -0.49
EPB41L3-204ENST00000540638 TEN1Q86WV5 123 aa12.01□□□□□ -0.49
EPB41L3-204ENST00000540638 MALP21145 153 aa12□□□□□ -0.49
EPB41L3-204ENST00000540638 LINC00269Q8N2A0 174 aa12□□□□□ -0.49
EPB41L3-204ENST00000540638 LINC00526Q96FQ7 95 aa12□□□□□ -0.49
EPB41L3-204ENST00000540638 PPDPFLQ8WWR9 84 aa11.99□□□□□ -0.49
EPB41L3-204ENST00000540638 TEX49A0A1B0GTD5 131 aa11.99□□□□□ -0.49
EPB41L3-204ENST00000540638 SS18Q15532 418 aa11.99□□□□□ -0.49
EPB41L3-204ENST00000540638 APOC4P55056 127 aa11.99□□□□□ -0.49
EPB41L3-204ENST00000540638 OVOL2Q9BRP0 275 aa11.99□□□□□ -0.49
EPB41L3-204ENST00000540638 CARD19Q96LW7 228 aa11.98□□□□□ -0.49
EPB41L3-204ENST00000540638 X6R8D5 127 aa11.98□□□□□ -0.49
EPB41L3-204ENST00000540638 TRRAPQ9Y4A5 3859 aa11.98□□□□□ -0.49
EPB41L3-204ENST00000540638 CKS1BP61024 79 aa11.98□□□□□ -0.49
EPB41L3-204ENST00000540638 SPANXDQ9BXN6 97 aa11.97□□□□□ -0.49
EPB41L3-204ENST00000540638 RETNQ9HD89 108 aa11.97□□□□□ -0.49
EPB41L3-204ENST00000540638 SPANXCQ9NY87 97 aa11.97□□□□□ -0.49
EPB41L3-204ENST00000540638 CRPP02741 224 aa11.97□□□□□ -0.49
EPB41L3-204ENST00000540638 CELA1Q9UNI1 258 aa11.97□□□□□ -0.49
EPB41L3-204ENST00000540638 MGAM2Q2M2H8 2515 aa11.96□□□□□ -0.49
EPB41L3-204ENST00000540638 SOSTDC1Q6X4U4 206 aa11.96□□□□□ -0.49
EPB41L3-204ENST00000540638 SND1-IT1Q9HBX3 110 aa11.96□□□□□ -0.49
EPB41L3-204ENST00000540638 IFITM1P13164 125 aa11.95□□□□□ -0.5
EPB41L3-204ENST00000540638 LINC00959A0A1B0GUT2 108 aa11.95□□□□□ -0.5
EPB41L3-204ENST00000540638 IGHV4-30-4P0DP06 118 aa11.95□□□□□ -0.5
EPB41L3-204ENST00000540638 SBSPONQ8IVN8 264 aa11.95□□□□□ -0.5
EPB41L3-204ENST00000540638 C3orf56Q8N813 242 aa11.95□□□□□ -0.5
EPB41L3-204ENST00000540638 ANK3Q12955 4377 aaKnown RBP11.94□□□□□ -0.5
EPB41L3-204ENST00000540638 CFAP161Q6P656 301 aa11.94□□□□□ -0.5
EPB41L3-204ENST00000540638 ATP5G1P05496 136 aa11.94□□□□□ -0.5
EPB41L3-204ENST00000540638 CSDC2Q9Y534 153 aaKnown RBP11.93□□□□□ -0.5
EPB41L3-204ENST00000540638 IGLV5-39A0A0G2JS06 123 aa11.93□□□□□ -0.5
EPB41L3-204ENST00000540638 PRB2P02812 416 aaPredicted RBP11.93□□□□□ -0.5
EPB41L3-204ENST00000540638 Q9HAA7 133 aa11.93□□□□□ -0.5
EPB41L3-204ENST00000540638 KLK12Q9UKR0 248 aa11.93□□□□□ -0.5
EPB41L3-204ENST00000540638 IGLV5-45A0A087WSX0 123 aa11.92□□□□□ -0.5
EPB41L3-204ENST00000540638 COPS9Q8WXC6 57 aa11.92□□□□□ -0.5
EPB41L3-204ENST00000540638 TRBV30A0A0K0K1B3 111 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms