RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 RS1O15537 224 aa13.31□□□□□ -0.28
SFSWAP-207ENST00000538548 DEFB131AP59861 70 aa13.31□□□□□ -0.28
SFSWAP-207ENST00000538548 PIMREGQ9BSJ6 248 aa13.31□□□□□ -0.28
SFSWAP-207ENST00000538548 ZNF469Q96JG9 3925 aaPredicted RBP13.31□□□□□ -0.28
SFSWAP-207ENST00000538548 HOXD3P31249 432 aaPredicted RBP13.3□□□□□ -0.28
SFSWAP-207ENST00000538548 Q6JHZ5 121 aa13.29□□□□□ -0.28
SFSWAP-207ENST00000538548 LINC00337Q8N6G1 96 aa13.28□□□□□ -0.28
SFSWAP-207ENST00000538548 OBSCN-AS1Q96MR7 158 aa13.27□□□□□ -0.28
SFSWAP-207ENST00000538548 C14orf132Q9NPU4 83 aa13.27□□□□□ -0.28
SFSWAP-207ENST00000538548 APCP25054 2843 aa13.27□□□□□ -0.28
SFSWAP-207ENST00000538548 TMEM258P61165 79 aa13.27□□□□□ -0.29
SFSWAP-207ENST00000538548 SERP2Q8N6R1 65 aa13.27□□□□□ -0.29
SFSWAP-207ENST00000538548 OR13C6PQ8NH95 151 aa13.26□□□□□ -0.29
SFSWAP-207ENST00000538548 CYSTM1Q9H1C7 97 aa13.26□□□□□ -0.29
SFSWAP-207ENST00000538548 A0A087WYN8 130 aa13.26□□□□□ -0.29
SFSWAP-207ENST00000538548 C9orf129Q5T035 196 aaKnown RBP13.26□□□□□ -0.29
SFSWAP-207ENST00000538548 CDC42SE2Q9NRR3 84 aa13.26□□□□□ -0.29
SFSWAP-207ENST00000538548 IGKV2-28A0A075B6P5 120 aa13.25□□□□□ -0.29
SFSWAP-207ENST00000538548 IGKV2D-28P01615 120 aa13.25□□□□□ -0.29
SFSWAP-207ENST00000538548 SND1-IT1Q9HBX3 110 aa13.25□□□□□ -0.29
SFSWAP-207ENST00000538548 TEX15Q9BXT5 2789 aa13.25□□□□□ -0.29
SFSWAP-207ENST00000538548 IGKV3D-7A0A0C4DH55 119 aa13.25□□□□□ -0.29
SFSWAP-207ENST00000538548 H0YGX0 51 aa13.25□□□□□ -0.29
SFSWAP-207ENST00000538548 ZNF843Q8N446 348 aa13.25□□□□□ -0.29
SFSWAP-207ENST00000538548 C10orf105Q8TEF2 133 aa13.25□□□□□ -0.29
SFSWAP-207ENST00000538548 LINC00846Q9NV44 126 aa13.25□□□□□ -0.29
SFSWAP-207ENST00000538548 MXRA5Q9NR99 2828 aa13.24□□□□□ -0.29
SFSWAP-207ENST00000538548 MSMBP08118 114 aa13.24□□□□□ -0.29
SFSWAP-207ENST00000538548 ATP5J2P56134 94 aa13.24□□□□□ -0.29
SFSWAP-207ENST00000538548 MIR7-3HGQ8N6C7 128 aa13.24□□□□□ -0.29
SFSWAP-207ENST00000538548 SMIM11BQ8TCY0 68 aa13.24□□□□□ -0.29
SFSWAP-207ENST00000538548 Q96MF0 132 aa13.24□□□□□ -0.29
SFSWAP-207ENST00000538548 UPK3BQ9BT76 320 aa13.23□□□□□ -0.29
SFSWAP-207ENST00000538548 IGHV4-59P01825 116 aa13.23□□□□□ -0.29
SFSWAP-207ENST00000538548 NTM-AS1Q6ZSK4 140 aa13.22□□□□□ -0.29
SFSWAP-207ENST00000538548 SONP18583 2426 aaKnown RBP13.22□□□□□ -0.29
SFSWAP-207ENST00000538548 ITPR2Q14571 2701 aa13.22□□□□□ -0.29
SFSWAP-207ENST00000538548 INSP01308 110 aa13.22□□□□□ -0.29
SFSWAP-207ENST00000538548 RPL36AP83881 106 aaKnown RBP13.22□□□□□ -0.29
SFSWAP-207ENST00000538548 RPL36ALQ969Q0 106 aaKnown RBP13.22□□□□□ -0.29
SFSWAP-207ENST00000538548 DPH3Q96FX2 82 aa13.22□□□□□ -0.29
SFSWAP-207ENST00000538548 AVPP01185 164 aa13.21□□□□□ -0.29
SFSWAP-207ENST00000538548 UBE2E2Q96LR5 201 aa13.21□□□□□ -0.3
SFSWAP-207ENST00000538548 TRBV10-1A0A0K0K1A3 114 aa13.2□□□□□ -0.3
SFSWAP-207ENST00000538548 LINC01561Q8N1V8 128 aa13.2□□□□□ -0.3
SFSWAP-207ENST00000538548 CCL19Q99731 98 aa13.2□□□□□ -0.3
SFSWAP-207ENST00000538548 NOTCH2Q04721 2471 aa13.2□□□□□ -0.3
SFSWAP-207ENST00000538548 A0A087WVE0 104 aa13.2□□□□□ -0.3
SFSWAP-207ENST00000538548 USP17L23D6RBM5 183 aa13.2□□□□□ -0.3
SFSWAP-207ENST00000538548 COX7B2Q8TF08 81 aa13.19□□□□□ -0.3
SFSWAP-207ENST00000538548 KIR2DL5BQ8NHK3 375 aa13.18□□□□□ -0.3
SFSWAP-207ENST00000538548 HECTD1Q9ULT8 2610 aa13.18□□□□□ -0.3
SFSWAP-207ENST00000538548 FASNP49327 2511 aaKnown RBP13.18□□□□□ -0.3
SFSWAP-207ENST00000538548 GCN1Q92616 2671 aaKnown RBP13.18□□□□□ -0.3
SFSWAP-207ENST00000538548 K7EQD1 137 aa13.18□□□□□ -0.3
SFSWAP-207ENST00000538548 MAPK1IP1LQ8NDC0 245 aa13.18□□□□□ -0.3
SFSWAP-207ENST00000538548 CUBNO60494 3623 aa13.17□□□□□ -0.3
SFSWAP-207ENST00000538548 LECT2O14960 151 aa13.17□□□□□ -0.3
SFSWAP-207ENST00000538548 MAP6D1Q9H9H5 199 aa13.17□□□□□ -0.3
SFSWAP-207ENST00000538548 IGHV4-30-2A0A087WSY4 118 aa13.17□□□□□ -0.3
SFSWAP-207ENST00000538548 DEFB112Q30KQ8 113 aa13.17□□□□□ -0.3
SFSWAP-207ENST00000538548 NCR3O14931 201 aa13.16□□□□□ -0.3
SFSWAP-207ENST00000538548 CCL18P55774 89 aa13.16□□□□□ -0.3
SFSWAP-207ENST00000538548 LINC00158P58513 81 aa13.16□□□□□ -0.3
SFSWAP-207ENST00000538548 ACANP16112 2415 aa13.15□□□□□ -0.3
SFSWAP-207ENST00000538548 TRGV1A0A0A0MS02 117 aa13.15□□□□□ -0.3
SFSWAP-207ENST00000538548 SLURP1P55000 103 aa13.15□□□□□ -0.3
SFSWAP-207ENST00000538548 UBE2L6O14933 153 aa13.15□□□□□ -0.3
SFSWAP-207ENST00000538548 KRTAP10-9P60411 292 aa13.14□□□□□ -0.31
SFSWAP-207ENST00000538548 IL17DQ8TAD2 202 aa13.14□□□□□ -0.31
SFSWAP-207ENST00000538548 TOMM7Q9P0U1 55 aa13.14□□□□□ -0.31
SFSWAP-207ENST00000538548 B4DSR2 109 aa13.13□□□□□ -0.31
SFSWAP-207ENST00000538548 WIPF1O43516 503 aa13.13□□□□□ -0.31
SFSWAP-207ENST00000538548 DSCR8Q96T75 97 aa13.13□□□□□ -0.31
SFSWAP-207ENST00000538548 TMEM243Q9BU79 118 aa13.13□□□□□ -0.31
SFSWAP-207ENST00000538548 SETD2Q9BYW2 2564 aaPredicted RBP13.13□□□□□ -0.31
SFSWAP-207ENST00000538548 IBA57-AS1B1ANH7 110 aa13.12□□□□□ -0.31
SFSWAP-207ENST00000538548 DEFB136Q30KP8 78 aa13.12□□□□□ -0.31
SFSWAP-207ENST00000538548 KMT2BQ9UMN6 2715 aaPredicted RBP13.12□□□□□ -0.31
SFSWAP-207ENST00000538548 NF1P21359 2839 aa13.12□□□□□ -0.31
SFSWAP-207ENST00000538548 ORMDL1Q9P0S3 153 aa13.11□□□□□ -0.31
SFSWAP-207ENST00000538548 XCL2Q9UBD3 114 aa13.11□□□□□ -0.31
SFSWAP-207ENST00000538548 CCKP06307 115 aa13.11□□□□□ -0.31
SFSWAP-207ENST00000538548 MYO9AB2RTY4 2548 aa13.11□□□□□ -0.31
SFSWAP-207ENST00000538548 OXTP01178 125 aa13.1□□□□□ -0.31
SFSWAP-207ENST00000538548 S100A7L2Q5SY68 101 aa13.1□□□□□ -0.31
SFSWAP-207ENST00000538548 ITPR3Q14573 2671 aa13.1□□□□□ -0.31
SFSWAP-207ENST00000538548 SS18Q15532 418 aa13.1□□□□□ -0.31
SFSWAP-207ENST00000538548 FLNAP21333 2647 aaKnown RBP13.1□□□□□ -0.31
SFSWAP-207ENST00000538548 SLPIP03973 132 aa13.09□□□□□ -0.31
SFSWAP-207ENST00000538548 ATP5EP2Q5VTU8 51 aa13.09□□□□□ -0.31
SFSWAP-207ENST00000538548 PAX4O43316 350 aa13.09□□□□□ -0.31
SFSWAP-207ENST00000538548 Q6ZTI0 123 aa13.09□□□□□ -0.31
SFSWAP-207ENST00000538548 C18orf65Q6ZTR6 163 aa13.08□□□□□ -0.32
SFSWAP-207ENST00000538548 C1orf158Q8N1D5 194 aa13.08□□□□□ -0.32
SFSWAP-207ENST00000538548 ZNF702PQ9H963 129 aa13.08□□□□□ -0.32
SFSWAP-207ENST00000538548 C2CD3Q4AC94 2353 aa13.08□□□□□ -0.32
SFSWAP-207ENST00000538548 LY6G6DO95868 133 aa13.08□□□□□ -0.32
SFSWAP-207ENST00000538548 DYNLRB2Q8TF09 96 aa13.07□□□□□ -0.32
SFSWAP-207ENST00000538548 TRBV6-4A0A1B0GX49 114 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms