RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 LINC01546A6NGU7 62 aa8.58□□□□□ -1.04
CHFR-216ENST00000538235 PSCAO43653 123 aa8.58□□□□□ -1.04
CHFR-216ENST00000538235 SERF1AO75920 110 aa8.58□□□□□ -1.04
CHFR-216ENST00000538235 PCP4P48539 62 aa8.58□□□□□ -1.04
CHFR-216ENST00000538235 PTTG1IPP53801 180 aa8.58□□□□□ -1.04
CHFR-216ENST00000538235 SPATA45Q537H7 98 aa8.58□□□□□ -1.04
CHFR-216ENST00000538235 LINC00173Q6ZV60 143 aa8.58□□□□□ -1.04
CHFR-216ENST00000538235 Q8N814 137 aa8.58□□□□□ -1.04
CHFR-216ENST00000538235 OR5A1Q8NGJ0 315 aa8.58□□□□□ -1.04
CHFR-216ENST00000538235 C1orf43Q9BWL3 253 aa8.58□□□□□ -1.04
CHFR-216ENST00000538235 PMCHL2Q9BQD1 86 aa8.57□□□□□ -1.04
CHFR-216ENST00000538235 TIMM21Q9BVV7 248 aa8.57□□□□□ -1.04
CHFR-216ENST00000538235 PAM16Q9Y3D7 125 aa8.57□□□□□ -1.04
CHFR-216ENST00000538235 IGLV4-3A0A075B6K6 122 aa8.56□□□□□ -1.04
CHFR-216ENST00000538235 LINC00959A0A1B0GUT2 108 aa8.56□□□□□ -1.04
CHFR-216ENST00000538235 USP17L23D6RBM5 183 aa8.56□□□□□ -1.04
CHFR-216ENST00000538235 KRTDAPP60985 99 aa8.56□□□□□ -1.04
CHFR-216ENST00000538235 FOXI1Q12951 378 aa8.56□□□□□ -1.04
CHFR-216ENST00000538235 UBE2V1Q13404 147 aa8.56□□□□□ -1.04
CHFR-216ENST00000538235 Q6ZN92 141 aa8.56□□□□□ -1.04
CHFR-216ENST00000538235 C15orf56Q8N910 161 aa8.56□□□□□ -1.04
CHFR-216ENST00000538235 CHCHD10Q8WYQ3 142 aaPredicted RBP8.56□□□□□ -1.04
CHFR-216ENST00000538235 TM2D2Q9BX73 214 aa8.56□□□□□ -1.04
CHFR-216ENST00000538235 CSDC2Q9Y534 153 aaKnown RBP8.56□□□□□ -1.04
CHFR-216ENST00000538235 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.55□□□□□ -1.04
CHFR-216ENST00000538235 GAGE12HA6NDE8 117 aa8.55□□□□□ -1.04
CHFR-216ENST00000538235 HSBP1L1C9JCN9 74 aa8.55□□□□□ -1.04
CHFR-216ENST00000538235 IGLC3P0DOY3 106 aa8.55□□□□□ -1.04
CHFR-216ENST00000538235 LINC00310P59036 64 aa8.55□□□□□ -1.04
CHFR-216ENST00000538235 KRTAP10-1P60331 282 aa8.55□□□□□ -1.04
CHFR-216ENST00000538235 LINC01620Q4KN68 170 aa8.55□□□□□ -1.04
CHFR-216ENST00000538235 C2orf66Q6UXQ4 117 aa8.55□□□□□ -1.04
CHFR-216ENST00000538235 NXT2Q9NPJ8 142 aaKnown RBP8.55□□□□□ -1.04
CHFR-216ENST00000538235 IGIPA6NJ69 53 aa8.54□□□□□ -1.04
CHFR-216ENST00000538235 CCL25O15444 150 aa8.54□□□□□ -1.04
CHFR-216ENST00000538235 HSBP1O75506 76 aa8.54□□□□□ -1.04
CHFR-216ENST00000538235 PRSS1P07477 247 aa8.54□□□□□ -1.04
CHFR-216ENST00000538235 RMI2Q96E14 147 aa8.54□□□□□ -1.04
CHFR-216ENST00000538235 C16orf90A8MZG2 172 aa8.53□□□□□ -1.04
CHFR-216ENST00000538235 SLPIP03973 132 aa8.53□□□□□ -1.04
CHFR-216ENST00000538235 XCL1P47992 114 aa8.53□□□□□ -1.04
CHFR-216ENST00000538235 MRPS36P82909 103 aaKnown RBP8.53□□□□□ -1.04
CHFR-216ENST00000538235 CHCHD1Q96BP2 118 aaKnown RBP8.53□□□□□ -1.04
CHFR-216ENST00000538235 TMEM101Q96IK0 257 aa8.53□□□□□ -1.04
CHFR-216ENST00000538235 SPANXA1Q9NS26 97 aa8.53□□□□□ -1.04
CHFR-216ENST00000538235 COX11Q9Y6N1 276 aa8.53□□□□□ -1.04
CHFR-216ENST00000538235 TRAV8-4A0A0B4J246 113 aa8.52□□□□□ -1.05
CHFR-216ENST00000538235 NPSP0C0P6 89 aa8.52□□□□□ -1.05
CHFR-216ENST00000538235 BATFQ16520 125 aa8.52□□□□□ -1.05
CHFR-216ENST00000538235 PYGO1Q9Y3Y4 419 aa8.52□□□□□ -1.05
CHFR-216ENST00000538235 TRAV13-1A0A0B4J241 112 aa8.51□□□□□ -1.05
CHFR-216ENST00000538235 ORMDL2Q53FV1 153 aa8.51□□□□□ -1.05
CHFR-216ENST00000538235 PRSS3P2Q8NHM4 247 aa8.51□□□□□ -1.05
CHFR-216ENST00000538235 TOMM6Q96B49 74 aa8.51□□□□□ -1.05
CHFR-216ENST00000538235 CYSLTR1Q9Y271 337 aa8.51□□□□□ -1.05
CHFR-216ENST00000538235 K7ERU9 68 aa8.5□□□□□ -1.05
CHFR-216ENST00000538235 HAMPP81172 84 aa8.5□□□□□ -1.05
CHFR-216ENST00000538235 DGAT2L7PQ6IED9 249 aa8.5□□□□□ -1.05
CHFR-216ENST00000538235 AMELXQ99217 191 aa8.5□□□□□ -1.05
CHFR-216ENST00000538235 IGLV5-52A0A0A0MRZ9 124 aa8.49□□□□□ -1.05
CHFR-216ENST00000538235 K7EMI3 77 aa8.49□□□□□ -1.05
CHFR-216ENST00000538235 NUPR1O60356 82 aa8.49□□□□□ -1.05
CHFR-216ENST00000538235 C3orf79P0CE67 100 aa8.49□□□□□ -1.05
CHFR-216ENST00000538235 COX6A2Q02221 97 aa8.49□□□□□ -1.05
CHFR-216ENST00000538235 HIGD2BQ4VC39 106 aa8.49□□□□□ -1.05
CHFR-216ENST00000538235 LINC00526Q96FQ7 95 aa8.49□□□□□ -1.05
CHFR-216ENST00000538235 FAM30AQ9NZY2 134 aa8.49□□□□□ -1.05
CHFR-216ENST00000538235 HSPB8Q9UJY1 196 aa8.49□□□□□ -1.05
CHFR-216ENST00000538235 UBE2D1P51668 147 aa8.48□□□□□ -1.05
CHFR-216ENST00000538235 FA2HQ7L5A8 372 aa8.48□□□□□ -1.05
CHFR-216ENST00000538235 TMEM141Q96I45 108 aa8.48□□□□□ -1.05
CHFR-216ENST00000538235 LINC00242Q5T6M2 205 aa8.47□□□□□ -1.05
CHFR-216ENST00000538235 CD164L2Q6UWJ8 174 aa8.47□□□□□ -1.05
CHFR-216ENST00000538235 TIMM17AQ99595 171 aa8.47□□□□□ -1.05
CHFR-216ENST00000538235 AP5S1Q9NUS5 200 aa8.47□□□□□ -1.05
CHFR-216ENST00000538235 PGPEP1Q9NXJ5 209 aa8.47□□□□□ -1.05
CHFR-216ENST00000538235 FAT1Q14517 4588 aa8.47□□□□□ -1.05
CHFR-216ENST00000538235 GVQW2A0A096LPI5 108 aaPredicted RBP8.46□□□□□ -1.06
CHFR-216ENST00000538235 IGHV3OR16-9A0A0B4J2B5 98 aa8.46□□□□□ -1.06
CHFR-216ENST00000538235 SEC11AP67812 179 aa8.46□□□□□ -1.06
CHFR-216ENST00000538235 SS18Q15532 418 aa8.46□□□□□ -1.06
CHFR-216ENST00000538235 SLC25A34Q6PIV7 304 aa8.46□□□□□ -1.06
CHFR-216ENST00000538235 GTF2H5Q6ZYL4 71 aa8.46□□□□□ -1.06
CHFR-216ENST00000538235 C5orf38Q86SI9 138 aa8.46□□□□□ -1.06
CHFR-216ENST00000538235 MAP1LC3CQ9BXW4 147 aa8.46□□□□□ -1.06
CHFR-216ENST00000538235 PANO1I0J062 215 aa8.45□□□□□ -1.06
CHFR-216ENST00000538235 GCSHP23434 173 aa8.45□□□□□ -1.06
CHFR-216ENST00000538235 XGP55808 180 aa8.45□□□□□ -1.06
CHFR-216ENST00000538235 VAMP3Q15836 100 aa8.45□□□□□ -1.06
CHFR-216ENST00000538235 STPG4Q8N801 248 aa8.45□□□□□ -1.06
CHFR-216ENST00000538235 hDV102S1A0JD36 115 aa8.44□□□□□ -1.06
CHFR-216ENST00000538235 Q6ZSA8 131 aa8.44□□□□□ -1.06
CHFR-216ENST00000538235 ERASQ7Z444 233 aa8.44□□□□□ -1.06
CHFR-216ENST00000538235 SCGB3A1Q96QR1 104 aa8.44□□□□□ -1.06
CHFR-216ENST00000538235 A0A0J9YXV3 536 aa8.43□□□□□ -1.06
CHFR-216ENST00000538235 A6NDN8 102 aa8.43□□□□□ -1.06
CHFR-216ENST00000538235 SMAGPQ0VAQ4 97 aa8.43□□□□□ -1.06
CHFR-216ENST00000538235 FAM19A3Q7Z5A8 133 aa8.43□□□□□ -1.06
CHFR-216ENST00000538235 FAM19A2Q8N3H0 131 aa8.43□□□□□ -1.06
CHFR-216ENST00000538235 ABCA13Q86UQ4 5058 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms