RNA–Protein interactions for RNA: ENST00000533683.6

SAMD1-202, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SAMD1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-202ENST00000533683 PAX4O43316 350 aa19.85■□□□□ 0.77
SAMD1-202ENST00000533683 DAD1P61803 113 aa19.85■□□□□ 0.77
SAMD1-202ENST00000533683 RNF151Q2KHN1 245 aa19.85■□□□□ 0.77
SAMD1-202ENST00000533683 F5H768 121 aa19.84■□□□□ 0.77
SAMD1-202ENST00000533683 A4D1N5 150 aa19.84■□□□□ 0.77
SAMD1-202ENST00000533683 KRTAP10-11P60412 298 aa19.84■□□□□ 0.77
SAMD1-202ENST00000533683 ADAMTSL4-AS1Q5T5F5 129 aa19.84■□□□□ 0.77
SAMD1-202ENST00000533683 C3orf56Q8N813 242 aa19.84■□□□□ 0.77
SAMD1-202ENST00000533683 STAB1Q9NY15 2570 aa19.84■□□□□ 0.77
SAMD1-202ENST00000533683 NDUFA1O15239 70 aa19.83■□□□□ 0.76
SAMD1-202ENST00000533683 RPL24P83731 157 aaKnown RBP19.82■□□□□ 0.76
SAMD1-202ENST00000533683 A0A096LPF7 62 aa19.81■□□□□ 0.76
SAMD1-202ENST00000533683 TSPAN13O95857 204 aa19.81■□□□□ 0.76
SAMD1-202ENST00000533683 IGKV3OR2-268A0A0C4DH90 116 aa19.8■□□□□ 0.76
SAMD1-202ENST00000533683 SPANXDQ9BXN6 97 aa19.8■□□□□ 0.76
SAMD1-202ENST00000533683 SPANXCQ9NY87 97 aa19.8■□□□□ 0.76
SAMD1-202ENST00000533683 PKD1L1Q8TDX9 2849 aa19.79■□□□□ 0.76
SAMD1-202ENST00000533683 EIF4EBP3O60516 100 aaPredicted RBP19.78■□□□□ 0.76
SAMD1-202ENST00000533683 SPART-AS1P0CW21 52 aa19.78■□□□□ 0.76
SAMD1-202ENST00000533683 ATP5G1P05496 136 aa19.78■□□□□ 0.76
SAMD1-202ENST00000533683 PRSS2P07478 247 aa19.78■□□□□ 0.76
SAMD1-202ENST00000533683 SHISA2Q6UWI4 295 aa19.77■□□□□ 0.76
SAMD1-202ENST00000533683 Q9H8V8 135 aa19.77■□□□□ 0.76
SAMD1-202ENST00000533683 PRO1854Q9UHT4 67 aa19.77■□□□□ 0.75
SAMD1-202ENST00000533683 CYSRT1A8MQ03 144 aa19.76■□□□□ 0.75
SAMD1-202ENST00000533683 TIMM17BO60830 172 aa19.76■□□□□ 0.75
SAMD1-202ENST00000533683 MIAQ16674 131 aa19.76■□□□□ 0.75
SAMD1-202ENST00000533683 VPS25Q9BRG1 176 aa19.76■□□□□ 0.75
SAMD1-202ENST00000533683 EGFEM1PQ0D2K5 195 aa19.75■□□□□ 0.75
SAMD1-202ENST00000533683 TMEM262E9PQX1 116 aa19.74■□□□□ 0.75
SAMD1-202ENST00000533683 PRIMA1Q86XR5 153 aa19.74■□□□□ 0.75
SAMD1-202ENST00000533683 TRAV26-1A0A087WT03 109 aa19.74■□□□□ 0.75
SAMD1-202ENST00000533683 CMYA5Q8N3K9 4069 aa19.74■□□□□ 0.75
SAMD1-202ENST00000533683 K7ERU9 68 aa19.73■□□□□ 0.75
SAMD1-202ENST00000533683 SFTA2Q6UW10 78 aa19.73■□□□□ 0.75
SAMD1-202ENST00000533683 BAHCC1Q9P281 2608 aa19.73■□□□□ 0.75
SAMD1-202ENST00000533683 A0A0B4J2C4 111 aa19.73■□□□□ 0.75
SAMD1-202ENST00000533683 A0A1B0GUV1 79 aa19.73■□□□□ 0.75
SAMD1-202ENST00000533683 H3BMG7 143 aa19.72■□□□□ 0.75
SAMD1-202ENST00000533683 TRAV16A0A0A6YYK6 109 aaPredicted RBP19.71■□□□□ 0.75
SAMD1-202ENST00000533683 ZNF625Q96I27 306 aaPredicted RBP19.71■□□□□ 0.75
SAMD1-202ENST00000533683 MAST4O15021 2626 aa19.71■□□□□ 0.75
SAMD1-202ENST00000533683 IGHV3OR16-9A0A0B4J2B5 98 aa19.71■□□□□ 0.75
SAMD1-202ENST00000533683 NPC2P61916 151 aa19.7■□□□□ 0.74
SAMD1-202ENST00000533683 LOC107984156A0A0G2JMH3 177 aa19.7■□□□□ 0.74
SAMD1-202ENST00000533683 HTN3P15516 51 aa19.7■□□□□ 0.74
SAMD1-202ENST00000533683 ARL17AQ8IVW1 177 aa19.7■□□□□ 0.74
SAMD1-202ENST00000533683 DAND5Q8N907 189 aa19.7■□□□□ 0.74
SAMD1-202ENST00000533683 LINC00959A0A1B0GUT2 108 aa19.69■□□□□ 0.74
SAMD1-202ENST00000533683 CIRBPQ14011 172 aaKnown RBP19.68■□□□□ 0.74
SAMD1-202ENST00000533683 IGHV3-33P01772 117 aa19.68■□□□□ 0.74
SAMD1-202ENST00000533683 RETNQ9HD89 108 aa19.67■□□□□ 0.74
SAMD1-202ENST00000533683 IFITM1P13164 125 aa19.66■□□□□ 0.74
SAMD1-202ENST00000533683 G3V4G9 280 aa19.64■□□□□ 0.74
SAMD1-202ENST00000533683 A0A087WZ39 114 aa19.64■□□□□ 0.73
SAMD1-202ENST00000533683 COX7B2Q8TF08 81 aa19.64■□□□□ 0.73
SAMD1-202ENST00000533683 ERG28Q9UKR5 140 aa19.64■□□□□ 0.73
SAMD1-202ENST00000533683 HERV-K104P63124 156 aa19.63■□□□□ 0.73
SAMD1-202ENST00000533683 MRPL23Q16540 153 aaKnown RBP19.63■□□□□ 0.73
SAMD1-202ENST00000533683 ANK2Q01484 3957 aa19.63■□□□□ 0.73
SAMD1-202ENST00000533683 A0A0U1RRA0 63 aa19.63■□□□□ 0.73
SAMD1-202ENST00000533683 C5orf38Q86SI9 138 aa19.62■□□□□ 0.73
SAMD1-202ENST00000533683 F8W1H4 67 aa19.61■□□□□ 0.73
SAMD1-202ENST00000533683 H7C2G1 150 aa19.61■□□□□ 0.73
SAMD1-202ENST00000533683 TEX48A0A1B0GUV7 120 aa19.61■□□□□ 0.73
SAMD1-202ENST00000533683 LYRM7Q5U5X0 104 aa19.61■□□□□ 0.73
SAMD1-202ENST00000533683 CLPSL2Q6UWE3 100 aa19.61■□□□□ 0.73
SAMD1-202ENST00000533683 TOMM7Q9P0U1 55 aa19.61■□□□□ 0.73
SAMD1-202ENST00000533683 PSMB2P49721 201 aa19.6■□□□□ 0.73
SAMD1-202ENST00000533683 MEIG1Q5JSS6 88 aa19.6■□□□□ 0.73
SAMD1-202ENST00000533683 SS18Q15532 418 aa19.6■□□□□ 0.73
SAMD1-202ENST00000533683 LINC00308Q8TCZ7 52 aa19.6■□□□□ 0.73
SAMD1-202ENST00000533683 Q8N3U1 123 aa19.59■□□□□ 0.73
SAMD1-202ENST00000533683 ICOSQ9Y6W8 199 aa19.59■□□□□ 0.73
SAMD1-202ENST00000533683 XCL1P47992 114 aa19.59■□□□□ 0.73
SAMD1-202ENST00000533683 WFDC2Q14508 124 aa19.59■□□□□ 0.73
SAMD1-202ENST00000533683 PRO0461Q9UI25 63 aa19.59■□□□□ 0.73
SAMD1-202ENST00000533683 MTURNQ8N3F0 131 aa19.58■□□□□ 0.72
SAMD1-202ENST00000533683 COL6A5A8TX70 2615 aa19.58■□□□□ 0.72
SAMD1-202ENST00000533683 LINC00269Q8N2A0 174 aa19.57■□□□□ 0.72
SAMD1-202ENST00000533683 TCL1BO95988 128 aa19.56■□□□□ 0.72
SAMD1-202ENST00000533683 SCGB1C2P0DMR2 95 aa19.56■□□□□ 0.72
SAMD1-202ENST00000533683 SH2D6Q7Z4S9 175 aa19.56■□□□□ 0.72
SAMD1-202ENST00000533683 Q1RN00 199 aa19.55■□□□□ 0.72
SAMD1-202ENST00000533683 DNAH3Q8TD57 4116 aa19.55■□□□□ 0.72
SAMD1-202ENST00000533683 SOSTDC1Q6X4U4 206 aa19.54■□□□□ 0.72
SAMD1-202ENST00000533683 TRBV20-1A0A075B6N2 111 aa19.53■□□□□ 0.72
SAMD1-202ENST00000533683 LELP1Q5T871 98 aa19.53■□□□□ 0.72
SAMD1-202ENST00000533683 ANGP03950 147 aaKnown RBP19.53■□□□□ 0.72
SAMD1-202ENST00000533683 COPS9Q8WXC6 57 aa19.5■□□□□ 0.71
SAMD1-202ENST00000533683 REG3AQ06141 175 aa19.5■□□□□ 0.71
SAMD1-202ENST00000533683 C11orf68Q9H3H3 251 aaKnown RBP19.49■□□□□ 0.71
SAMD1-202ENST00000533683 TRBV30A0A0K0K1B3 111 aa19.48■□□□□ 0.71
SAMD1-202ENST00000533683 TENM3Q9P273 2699 aa19.47■□□□□ 0.71
SAMD1-202ENST00000533683 TRIAP1O43715 76 aa19.47■□□□□ 0.71
SAMD1-202ENST00000533683 Q6ZTC4 211 aa19.47■□□□□ 0.71
SAMD1-202ENST00000533683 NOTCH1P46531 2555 aa19.46■□□□□ 0.71
SAMD1-202ENST00000533683 CD164L2Q6UWJ8 174 aa19.46■□□□□ 0.71
SAMD1-202ENST00000533683 CHCHD10Q8WYQ3 142 aaPredicted RBP19.46■□□□□ 0.71
SAMD1-202ENST00000533683 SMCPP49901 116 aaPredicted RBP19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms