RNA–Protein interactions for RNA: ENST00000524111.5

SREK1-215, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 4,074 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-215ENST00000524111 G3V4G9 280 aa6.23□□□□□ -1.41
SREK1-215ENST00000524111 TINCRA0A1B0GVN0 87 aa6.23□□□□□ -1.41
SREK1-215ENST00000524111 SPANXB1Q9NS25 103 aaPredicted RBP6.23□□□□□ -1.41
SREK1-215ENST00000524111 ATXN8Q156A1 80 aa6.23□□□□□ -1.41
SREK1-215ENST00000524111 CKS1BP61024 79 aa6.22□□□□□ -1.41
SREK1-215ENST00000524111 MRPS36P82909 103 aaKnown RBP6.22□□□□□ -1.41
SREK1-215ENST00000524111 LINC00242Q5T6M2 205 aa6.22□□□□□ -1.41
SREK1-215ENST00000524111 PYGO1Q9Y3Y4 419 aa6.22□□□□□ -1.41
SREK1-215ENST00000524111 TRBV20-1A0A075B6N2 111 aa6.22□□□□□ -1.41
SREK1-215ENST00000524111 TRBV10-1A0A0K0K1A3 114 aa6.22□□□□□ -1.41
SREK1-215ENST00000524111 IGHV3-33P01772 117 aa6.22□□□□□ -1.41
SREK1-215ENST00000524111 ANKRD29Q8N6D5 301 aa6.22□□□□□ -1.41
SREK1-215ENST00000524111 UBE2D1P51668 147 aa6.22□□□□□ -1.41
SREK1-215ENST00000524111 NTM-AS1Q6ZSK4 140 aa6.22□□□□□ -1.41
SREK1-215ENST00000524111 CRPP02741 224 aa6.21□□□□□ -1.41
SREK1-215ENST00000524111 CFAP161Q6P656 301 aa6.21□□□□□ -1.41
SREK1-215ENST00000524111 FAM110AQ9BQ89 295 aa6.21□□□□□ -1.41
SREK1-215ENST00000524111 IGLV4-60A0A075B6I1 120 aa6.21□□□□□ -1.42
SREK1-215ENST00000524111 DNAL4O96015 105 aa6.21□□□□□ -1.42
SREK1-215ENST00000524111 MIR7-3HGQ8N6C7 128 aa6.21□□□□□ -1.42
SREK1-215ENST00000524111 LINC00526Q96FQ7 95 aa6.21□□□□□ -1.42
SREK1-215ENST00000524111 TRIAP1O43715 76 aa6.21□□□□□ -1.42
SREK1-215ENST00000524111 FHL3Q13643 280 aa6.21□□□□□ -1.42
SREK1-215ENST00000524111 ICOSQ9Y6W8 199 aa6.21□□□□□ -1.42
SREK1-215ENST00000524111 TRAV26-1A0A087WT03 109 aa6.2□□□□□ -1.42
SREK1-215ENST00000524111 MIAQ16674 131 aa6.2□□□□□ -1.42
SREK1-215ENST00000524111 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.2□□□□□ -1.42
SREK1-215ENST00000524111 C3orf56Q8N813 242 aa6.2□□□□□ -1.42
SREK1-215ENST00000524111 CARD19Q96LW7 228 aa6.2□□□□□ -1.42
SREK1-215ENST00000524111 AMELXQ99217 191 aa6.2□□□□□ -1.42
SREK1-215ENST00000524111 UBE2D3P61077 147 aa6.2□□□□□ -1.42
SREK1-215ENST00000524111 UBE2D2P62837 147 aa6.2□□□□□ -1.42
SREK1-215ENST00000524111 SS18Q15532 418 aa6.2□□□□□ -1.42
SREK1-215ENST00000524111 BEAN1Q3B7T3 259 aa6.2□□□□□ -1.42
SREK1-215ENST00000524111 LINC01620Q4KN68 170 aa6.2□□□□□ -1.42
SREK1-215ENST00000524111 PPDPFLQ8WWR9 84 aa6.2□□□□□ -1.42
SREK1-215ENST00000524111 OXLD1Q5BKU9 147 aa6.2□□□□□ -1.42
SREK1-215ENST00000524111 C9orf66Q5T8R8 295 aa6.2□□□□□ -1.42
SREK1-215ENST00000524111 TRBV6-8A0A0A6YYG3 113 aa6.19□□□□□ -1.42
SREK1-215ENST00000524111 FOXI1Q12951 378 aa6.19□□□□□ -1.42
SREK1-215ENST00000524111 SPATA3Q8NHX4 192 aa6.19□□□□□ -1.42
SREK1-215ENST00000524111 EIF4EBP3O60516 100 aaPredicted RBP6.19□□□□□ -1.42
SREK1-215ENST00000524111 KRTAP1-1Q07627 177 aa6.19□□□□□ -1.42
SREK1-215ENST00000524111 CDC42SE2Q9NRR3 84 aa6.19□□□□□ -1.42
SREK1-215ENST00000524111 TEN1Q86WV5 123 aa6.19□□□□□ -1.42
SREK1-215ENST00000524111 LINC00269Q8N2A0 174 aa6.19□□□□□ -1.42
SREK1-215ENST00000524111 COX7B2Q8TF08 81 aa6.19□□□□□ -1.42
SREK1-215ENST00000524111 ZFAND6Q6FIF0 208 aa6.18□□□□□ -1.42
SREK1-215ENST00000524111 TEX49A0A1B0GTD5 131 aa6.18□□□□□ -1.42
SREK1-215ENST00000524111 MRAPQ8TCY5 172 aa6.18□□□□□ -1.42
SREK1-215ENST00000524111 SND1-IT1Q9HBX3 110 aa6.18□□□□□ -1.42
SREK1-215ENST00000524111 PRO0255Q9UI72 69 aa6.18□□□□□ -1.42
SREK1-215ENST00000524111 PRB2P02812 416 aaPredicted RBP6.18□□□□□ -1.42
SREK1-215ENST00000524111 APOC4P55056 127 aa6.18□□□□□ -1.42
SREK1-215ENST00000524111 LINC00308Q8TCZ7 52 aa6.18□□□□□ -1.42
SREK1-215ENST00000524111 SMIM1B2RUZ4 78 aa6.17□□□□□ -1.42
SREK1-215ENST00000524111 SNCGO76070 127 aa6.17□□□□□ -1.42
SREK1-215ENST00000524111 COPS9Q8WXC6 57 aa6.17□□□□□ -1.42
SREK1-215ENST00000524111 GIG44P09565 113 aaPredicted RBP6.17□□□□□ -1.42
SREK1-215ENST00000524111 DEFB121Q5J5C9 76 aa6.17□□□□□ -1.42
SREK1-215ENST00000524111 UBE2WQ96B02 151 aa6.17□□□□□ -1.42
SREK1-215ENST00000524111 Q9HAA7 133 aa6.17□□□□□ -1.42
SREK1-215ENST00000524111 KLK12Q9UKR0 248 aa6.17□□□□□ -1.42
SREK1-215ENST00000524111 TRAV8-4A0A0B4J246 113 aa6.17□□□□□ -1.42
SREK1-215ENST00000524111 TRBV6-4A0A1B0GX49 114 aa6.17□□□□□ -1.42
SREK1-215ENST00000524111 FHL2Q14192 279 aa6.17□□□□□ -1.42
SREK1-215ENST00000524111 IGHV4-28A0A0C4DH34 117 aa6.16□□□□□ -1.42
SREK1-215ENST00000524111 Q8N3U1 123 aa6.16□□□□□ -1.42
SREK1-215ENST00000524111 ATP5G1P05496 136 aa6.16□□□□□ -1.42
SREK1-215ENST00000524111 RETNQ9HD89 108 aa6.16□□□□□ -1.42
SREK1-215ENST00000524111 FBN1P35555 2871 aaKnown RBP6.16□□□□□ -1.42
SREK1-215ENST00000524111 A0A0B4J2C4 111 aa6.15□□□□□ -1.42
SREK1-215ENST00000524111 NDUFA1O15239 70 aa6.15□□□□□ -1.42
SREK1-215ENST00000524111 TIRAPP58753 221 aa6.15□□□□□ -1.42
SREK1-215ENST00000524111 KRTAP10-3P60369 221 aa6.15□□□□□ -1.42
SREK1-215ENST00000524111 C16orf95Q9H693 158 aa6.15□□□□□ -1.42
SREK1-215ENST00000524111 SMCPP49901 116 aaPredicted RBP6.15□□□□□ -1.43
SREK1-215ENST00000524111 CRYBA4P53673 196 aa6.15□□□□□ -1.43
SREK1-215ENST00000524111 MT-ATP8P03928 68 aa6.14□□□□□ -1.43
SREK1-215ENST00000524111 SPART-AS1P0CW21 52 aa6.14□□□□□ -1.43
SREK1-215ENST00000524111 IFITM1P13164 125 aa6.14□□□□□ -1.43
SREK1-215ENST00000524111 TTC32Q5I0X7 151 aa6.14□□□□□ -1.43
SREK1-215ENST00000524111 PDZD2O15018 2839 aa6.14□□□□□ -1.43
SREK1-215ENST00000524111 S100A7L2Q5SY68 101 aa6.14□□□□□ -1.43
SREK1-215ENST00000524111 IGHV4-30-4P0DP06 118 aa6.13□□□□□ -1.43
SREK1-215ENST00000524111 PRR3P79522 188 aaKnown RBP6.13□□□□□ -1.43
SREK1-215ENST00000524111 C9orf116Q5BN46 136 aaPredicted RBP6.13□□□□□ -1.43
SREK1-215ENST00000524111 GAGE2AQ6NT46 116 aa6.13□□□□□ -1.43
SREK1-215ENST00000524111 BAHCC1Q9P281 2608 aa6.13□□□□□ -1.43
SREK1-215ENST00000524111 LINC00959A0A1B0GUT2 108 aa6.12□□□□□ -1.43
SREK1-215ENST00000524111 A8MTW9 85 aa6.12□□□□□ -1.43
SREK1-215ENST00000524111 COX7A2LO14548 114 aa6.12□□□□□ -1.43
SREK1-215ENST00000524111 C19orf73Q9NVV2 129 aa6.12□□□□□ -1.43
SREK1-215ENST00000524111 BAALC-AS2P0C853 105 aa6.12□□□□□ -1.43
SREK1-215ENST00000524111 HERV-K104P63124 156 aa6.12□□□□□ -1.43
SREK1-215ENST00000524111 ZNF469Q96JG9 3925 aaPredicted RBP6.12□□□□□ -1.43
SREK1-215ENST00000524111 GAGE2BQ13066 116 aa6.12□□□□□ -1.43
SREK1-215ENST00000524111 GAGE2EQ4V326 116 aa6.12□□□□□ -1.43
SREK1-215ENST00000524111 FAM104AQ969W3 186 aa6.12□□□□□ -1.43
SREK1-215ENST00000524111 GAGE2DQ9UEU5 116 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms