RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 MYO5CQ9NQX4 1742 aa1.85□□□□□ -2.11
SKP1-209ENST00000522552 SCN11AQ9UI33 1791 aa1.84□□□□□ -2.11
SKP1-209ENST00000522552 VWDEQ8N2E2 1590 aa1.84□□□□□ -2.11
SKP1-209ENST00000522552 ARMS2P0C7Q2 107 aa1.84□□□□□ -2.11
SKP1-209ENST00000522552 HEPN1Q6WQI6 88 aa1.84□□□□□ -2.11
SKP1-209ENST00000522552 F5P12259 2224 aa1.84□□□□□ -2.11
SKP1-209ENST00000522552 ABCC1P33527 1531 aa1.84□□□□□ -2.12
SKP1-209ENST00000522552 RGPD2P0DJD1 1756 aa1.84□□□□□ -2.12
SKP1-209ENST00000522552 TRGV1A0A0A0MS02 117 aa1.83□□□□□ -2.12
SKP1-209ENST00000522552 CTXND1A0A1B0GTU2 59 aa1.83□□□□□ -2.12
SKP1-209ENST00000522552 UQCR11O14957 56 aa1.83□□□□□ -2.12
SKP1-209ENST00000522552 BAGE3Q86Y29 109 aa1.83□□□□□ -2.12
SKP1-209ENST00000522552 RGPD8O14715 1765 aaPredicted RBP1.83□□□□□ -2.12
SKP1-209ENST00000522552 RGPD5Q99666 1765 aa1.83□□□□□ -2.12
SKP1-209ENST00000522552 TRAV1-2A0A0B4J238 106 aa1.83□□□□□ -2.12
SKP1-209ENST00000522552 A0A1B0GWA3 101 aa1.83□□□□□ -2.12
SKP1-209ENST00000522552 ABCC2Q92887 1545 aa1.83□□□□□ -2.12
SKP1-209ENST00000522552 TMEM131LA2VDJ0 1609 aa1.82□□□□□ -2.12
SKP1-209ENST00000522552 E9PCH4 1651 aa1.82□□□□□ -2.12
SKP1-209ENST00000522552 SPINT3P49223 89 aa1.82□□□□□ -2.12
SKP1-209ENST00000522552 HMGN3Q15651 99 aa1.82□□□□□ -2.12
SKP1-209ENST00000522552 PCOTHQ58A44 107 aa1.82□□□□□ -2.12
SKP1-209ENST00000522552 FDCSPQ8NFU4 85 aa1.82□□□□□ -2.12
SKP1-209ENST00000522552 KDM3BQ7LBC6 1761 aa1.82□□□□□ -2.12
SKP1-209ENST00000522552 MYMXA0A1B0GTQ4 84 aa1.81□□□□□ -2.12
SKP1-209ENST00000522552 LEPROTL1O95214 131 aa1.81□□□□□ -2.12
SKP1-209ENST00000522552 ZNF137PP52743 207 aa1.81□□□□□ -2.12
SKP1-209ENST00000522552 IFT172Q9UG01 1749 aa1.81□□□□□ -2.12
SKP1-209ENST00000522552 CACNA1BQ00975 2339 aa1.81□□□□□ -2.12
SKP1-209ENST00000522552 ZMYM4Q5VZL5 1548 aa1.81□□□□□ -2.12
SKP1-209ENST00000522552 KRTAP13-3Q3SY46 172 aa1.8□□□□□ -2.12
SKP1-209ENST00000522552 MROH1Q8NDA8 1641 aa1.8□□□□□ -2.12
SKP1-209ENST00000522552 MAGI3Q5TCQ9 1506 aa1.8□□□□□ -2.12
SKP1-209ENST00000522552 ZDBF2Q9HCK1 2354 aa1.8□□□□□ -2.12
SKP1-209ENST00000522552 A0A087WVE0 104 aa1.8□□□□□ -2.12
SKP1-209ENST00000522552 D6R8Y8 96 aa1.8□□□□□ -2.12
SKP1-209ENST00000522552 MGPP08493 103 aa1.8□□□□□ -2.12
SKP1-209ENST00000522552 SMIM13P0DJ93 91 aa1.8□□□□□ -2.12
SKP1-209ENST00000522552 PLGLAQ15195 96 aa1.8□□□□□ -2.12
SKP1-209ENST00000522552 MUSTN1Q8IVN3 82 aa1.8□□□□□ -2.12
SKP1-209ENST00000522552 PROK2Q9HC23 129 aa1.8□□□□□ -2.12
SKP1-209ENST00000522552 LRRC9Q6ZRR7 1453 aa1.8□□□□□ -2.12
SKP1-209ENST00000522552 CACNA1CQ13936 2221 aa1.79□□□□□ -2.12
SKP1-209ENST00000522552 KNDC1Q76NI1 1749 aa1.79□□□□□ -2.12
SKP1-209ENST00000522552 ACYP2P14621 99 aa1.79□□□□□ -2.12
SKP1-209ENST00000522552 DEFB121Q5J5C9 76 aa1.79□□□□□ -2.12
SKP1-209ENST00000522552 SPRR4Q96PI1 79 aa1.79□□□□□ -2.12
SKP1-209ENST00000522552 ARFGEF2Q9Y6D5 1785 aa1.79□□□□□ -2.12
SKP1-209ENST00000522552 TECTAO75443 2155 aa1.78□□□□□ -2.12
SKP1-209ENST00000522552 ANKRD36A6QL64 1941 aa1.78□□□□□ -2.12
SKP1-209ENST00000522552 NUP188Q5SRE5 1749 aa1.78□□□□□ -2.12
SKP1-209ENST00000522552 DUOX2Q9NRD8 1548 aa1.78□□□□□ -2.12
SKP1-209ENST00000522552 TRBV30A0A0K0K1B3 111 aa1.78□□□□□ -2.12
SKP1-209ENST00000522552 CEBPZOSA8MTT3 80 aa1.78□□□□□ -2.12
SKP1-209ENST00000522552 C10orf99Q6UWK7 81 aa1.78□□□□□ -2.12
SKP1-209ENST00000522552 ZCCHC13Q8WW36 166 aaKnown RBP1.78□□□□□ -2.12
SKP1-209ENST00000522552 MADDQ8WXG6 1647 aa1.78□□□□□ -2.12
SKP1-209ENST00000522552 KNTC1P50748 2209 aa1.78□□□□□ -2.13
SKP1-209ENST00000522552 INO80Q9ULG1 1556 aaPredicted RBP1.77□□□□□ -2.13
SKP1-209ENST00000522552 S100ZQ8WXG8 99 aa1.77□□□□□ -2.13
SKP1-209ENST00000522552 LINC00472Q9H8W2 130 aa1.77□□□□□ -2.13
SKP1-209ENST00000522552 MAP2P11137 1827 aaKnown RBP1.77□□□□□ -2.13
SKP1-209ENST00000522552 CADP27708 2225 aa1.77□□□□□ -2.13
SKP1-209ENST00000522552 KRTAP12-1P59990 96 aa1.77□□□□□ -2.13
SKP1-209ENST00000522552 SMIM4Q8WVI0 70 aa1.77□□□□□ -2.13
SKP1-209ENST00000522552 LINC00846Q9NV44 126 aa1.77□□□□□ -2.13
SKP1-209ENST00000522552 COX17Q14061 63 aa1.76□□□□□ -2.13
SKP1-209ENST00000522552 CUX1P39880 1505 aa1.76□□□□□ -2.13
SKP1-209ENST00000522552 COL4A4P53420 1690 aaPredicted RBP1.76□□□□□ -2.13
SKP1-209ENST00000522552 FLG2Q5D862 2391 aaPredicted RBP1.75□□□□□ -2.13
SKP1-209ENST00000522552 NCR3O14931 201 aa1.75□□□□□ -2.13
SKP1-209ENST00000522552 KRTAP10-10P60014 251 aa1.75□□□□□ -2.13
SKP1-209ENST00000522552 C6orf201Q7Z4U5 140 aa1.75□□□□□ -2.13
SKP1-209ENST00000522552 SETBP1Q9Y6X0 1596 aa1.75□□□□□ -2.13
SKP1-209ENST00000522552 COL4A1P02462 1669 aa1.75□□□□□ -2.13
SKP1-209ENST00000522552 CRYBG1Q9Y4K1 1723 aa1.75□□□□□ -2.13
SKP1-209ENST00000522552 UMAD1C9J7I0 102 aa1.74□□□□□ -2.13
SKP1-209ENST00000522552 DEFB107AQ8IZN7 70 aa1.74□□□□□ -2.13
SKP1-209ENST00000522552 PLAC8Q9NZF1 115 aa1.74□□□□□ -2.13
SKP1-209ENST00000522552 RAPGEF6Q8TEU7 1601 aa1.74□□□□□ -2.13
SKP1-209ENST00000522552 THOC2Q8NI27 1593 aaKnown RBP1.74□□□□□ -2.13
SKP1-209ENST00000522552 A0A096LNT2 108 aa1.74□□□□□ -2.13
SKP1-209ENST00000522552 KRTAP6-3Q3LI67 103 aa1.74□□□□□ -2.13
SKP1-209ENST00000522552 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.74□□□□□ -2.13
SKP1-209ENST00000522552 LINC00575Q6W349 94 aa1.74□□□□□ -2.13
SKP1-209ENST00000522552 UBE2D4Q9Y2X8 147 aa1.74□□□□□ -2.13
SKP1-209ENST00000522552 ITSN1Q15811 1721 aa1.73□□□□□ -2.13
SKP1-209ENST00000522552 Q6JHZ5 121 aa1.73□□□□□ -2.13
SKP1-209ENST00000522552 LCE3DQ9BYE3 92 aa1.73□□□□□ -2.13
SKP1-209ENST00000522552 RGPD1P0DJD0 1748 aa1.73□□□□□ -2.13
SKP1-209ENST00000522552 ASXL3Q9C0F0 2248 aa1.72□□□□□ -2.13
SKP1-209ENST00000522552 SHPRHQ149N8 1683 aa1.72□□□□□ -2.13
SKP1-209ENST00000522552 TMEM263Q8WUH6 116 aaKnown RBP1.72□□□□□ -2.13
SKP1-209ENST00000522552 PLAC4Q8WY50 150 aa1.72□□□□□ -2.13
SKP1-209ENST00000522552 EFCAB5A4FU69 1503 aa1.72□□□□□ -2.13
SKP1-209ENST00000522552 HFM1A2PYH4 1435 aa1.72□□□□□ -2.13
SKP1-209ENST00000522552 GVQW2A0A096LPI5 108 aaPredicted RBP1.71□□□□□ -2.14
SKP1-209ENST00000522552 LY6G6CO95867 125 aa1.71□□□□□ -2.14
SKP1-209ENST00000522552 SPINK7P58062 85 aa1.71□□□□□ -2.14
SKP1-209ENST00000522552 Q6ZRX8 168 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms