RNA–Protein interactions for RNA: ENST00000518528.1

PVT1-207, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 624 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-207ENST00000518528 KIR2DL4Q99706 377 aa5.18□□□□□ -1.58
PVT1-207ENST00000518528 RNASE7Q9H1E1 156 aaKnown RBP5.18□□□□□ -1.58
PVT1-207ENST00000518528 PPDPFQ9H3Y8 114 aa5.18□□□□□ -1.58
PVT1-207ENST00000518528 UBE2D4Q9Y2X8 147 aa5.18□□□□□ -1.58
PVT1-207ENST00000518528 ARPC5O15511 151 aa5.17□□□□□ -1.58
PVT1-207ENST00000518528 Q6ZUT4 128 aa5.17□□□□□ -1.58
PVT1-207ENST00000518528 KRTAP7-1Q8IUC3 87 aa5.17□□□□□ -1.58
PVT1-207ENST00000518528 TIMM21Q9BVV7 248 aa5.17□□□□□ -1.58
PVT1-207ENST00000518528 MED9Q9NWA0 146 aa5.17□□□□□ -1.58
PVT1-207ENST00000518528 MUC17Q685J3 4493 aa5.17□□□□□ -1.58
PVT1-207ENST00000518528 IGKV2D-26A0A0A0MRZ7 120 aa5.16□□□□□ -1.58
PVT1-207ENST00000518528 TGIF2-C20orf24A0A0A6YYL0 155 aa5.16□□□□□ -1.58
PVT1-207ENST00000518528 IGHV3OR16-9A0A0B4J2B5 98 aa5.16□□□□□ -1.58
PVT1-207ENST00000518528 BCE1O60756 84 aa5.16□□□□□ -1.58
PVT1-207ENST00000518528 FAM229BQ4G0N7 80 aa5.16□□□□□ -1.58
PVT1-207ENST00000518528 hCG_2014768A0A024R1R8 64 aa5.15□□□□□ -1.59
PVT1-207ENST00000518528 A8MWL6 223 aa5.15□□□□□ -1.59
PVT1-207ENST00000518528 SEC61BP60468 96 aaKnown RBP5.15□□□□□ -1.59
PVT1-207ENST00000518528 C9orf129Q5T035 196 aaKnown RBP5.15□□□□□ -1.59
PVT1-207ENST00000518528 C22orf24Q9Y442 160 aa5.15□□□□□ -1.59
PVT1-207ENST00000518528 TRBV20OR9-2A0A075B6H5 130 aa5.14□□□□□ -1.59
PVT1-207ENST00000518528 TCAPO15273 167 aa5.14□□□□□ -1.59
PVT1-207ENST00000518528 HBBP68871 147 aa5.14□□□□□ -1.59
PVT1-207ENST00000518528 ASB16-AS1Q495Z4 193 aa5.14□□□□□ -1.59
PVT1-207ENST00000518528 ANAPC11Q9NYG5 84 aa5.14□□□□□ -1.59
PVT1-207ENST00000518528 IFITM10A6NMD0 228 aa5.13□□□□□ -1.59
PVT1-207ENST00000518528 PPP1R2P9O14990 202 aa5.13□□□□□ -1.59
PVT1-207ENST00000518528 GATCO43716 136 aaKnown RBP5.13□□□□□ -1.59
PVT1-207ENST00000518528 UBE2AP49459 152 aa5.13□□□□□ -1.59
PVT1-207ENST00000518528 SUMO2P61956 95 aaKnown RBP5.13□□□□□ -1.59
PVT1-207ENST00000518528 KRTAP13-2Q52LG2 175 aa5.13□□□□□ -1.59
PVT1-207ENST00000518528 FP248Q71RG6 208 aaPredicted RBP5.13□□□□□ -1.59
PVT1-207ENST00000518528 MRPL55Q7Z7F7 128 aaKnown RBP5.13□□□□□ -1.59
PVT1-207ENST00000518528 TMEM191AQ9H0A3 160 aa5.13□□□□□ -1.59
PVT1-207ENST00000518528 SPANXA1Q9NS26 97 aa5.13□□□□□ -1.59
PVT1-207ENST00000518528 TP73-AS1Q9UF72 201 aa5.13□□□□□ -1.59
PVT1-207ENST00000518528 A0A1B0GUT8 65 aa5.12□□□□□ -1.59
PVT1-207ENST00000518528 KANTRA0A1W2PQU2 76 aa5.12□□□□□ -1.59
PVT1-207ENST00000518528 ZNF727A8MUV8 499 aa5.12□□□□□ -1.59
PVT1-207ENST00000518528 PRSS2P07478 247 aa5.12□□□□□ -1.59
PVT1-207ENST00000518528 RAB4AP20338 218 aa5.12□□□□□ -1.59
PVT1-207ENST00000518528 A0A1B0GVG6 124 aa5.11□□□□□ -1.59
PVT1-207ENST00000518528 CFC1BP0CG36 223 aa5.11□□□□□ -1.59
PVT1-207ENST00000518528 TAGLN2P37802 199 aaKnown RBP5.11□□□□□ -1.59
PVT1-207ENST00000518528 CKS1BP61024 79 aa5.11□□□□□ -1.59
PVT1-207ENST00000518528 MRPS36P82909 103 aaKnown RBP5.11□□□□□ -1.59
PVT1-207ENST00000518528 ZNF345Q14585 488 aa5.11□□□□□ -1.59
PVT1-207ENST00000518528 KIAA0087Q14695 138 aa5.11□□□□□ -1.59
PVT1-207ENST00000518528 LINC00242Q5T6M2 205 aa5.11□□□□□ -1.59
PVT1-207ENST00000518528 SPAG11AQ6PDA7 123 aa5.11□□□□□ -1.59
PVT1-207ENST00000518528 C2orf82Q6UX34 121 aa5.11□□□□□ -1.59
PVT1-207ENST00000518528 K7EN84 100 aa5.1□□□□□ -1.59
PVT1-207ENST00000518528 C4orf48Q5BLP8 95 aa5.1□□□□□ -1.59
PVT1-207ENST00000518528 CT83Q5H943 113 aa5.1□□□□□ -1.59
PVT1-207ENST00000518528 AMN1Q8IY45 258 aa5.1□□□□□ -1.59
PVT1-207ENST00000518528 LINC00469Q8N7U9 141 aa5.1□□□□□ -1.59
PVT1-207ENST00000518528 OCC1Q8TAD7 63 aa5.1□□□□□ -1.59
PVT1-207ENST00000518528 SMKR1H3BMG3 65 aa5.09□□□□□ -1.59
PVT1-207ENST00000518528 RIGQ13278 110 aa5.09□□□□□ -1.59
PVT1-207ENST00000518528 C6orf226Q5I0X4 101 aa5.09□□□□□ -1.59
PVT1-207ENST00000518528 LINC01561Q8N1V8 128 aa5.09□□□□□ -1.59
PVT1-207ENST00000518528 C20orf78Q9BR46 151 aa5.09□□□□□ -1.59
PVT1-207ENST00000518528 XAGE1AQ9HD64 81 aa5.09□□□□□ -1.59
PVT1-207ENST00000518528 RPL37AP8A6NKH3 93 aa5.08□□□□□ -1.6
PVT1-207ENST00000518528 HIGD1CA8MV81 97 aa5.08□□□□□ -1.6
PVT1-207ENST00000518528 RPL39P62891 51 aaKnown RBP5.08□□□□□ -1.6
PVT1-207ENST00000518528 FAM231DQ6ZW35 169 aa5.08□□□□□ -1.6
PVT1-207ENST00000518528 NRACQ8N912 160 aa5.08□□□□□ -1.6
PVT1-207ENST00000518528 IFI27P40305 119 aaPredicted RBP5.07□□□□□ -1.6
PVT1-207ENST00000518528 RPL32P62910 135 aaKnown RBP5.07□□□□□ -1.6
PVT1-207ENST00000518528 KRTAP13-3Q3SY46 172 aa5.07□□□□□ -1.6
PVT1-207ENST00000518528 Q6ZN92 141 aa5.07□□□□□ -1.6
PVT1-207ENST00000518528 LINC00167Q96N53 147 aa5.07□□□□□ -1.6
PVT1-207ENST00000518528 TOMM7Q9P0U1 55 aa5.07□□□□□ -1.6
PVT1-207ENST00000518528 LINC00862A6NCI5 91 aa5.06□□□□□ -1.6
PVT1-207ENST00000518528 GAGE10A6NGK3 116 aa5.06□□□□□ -1.6
PVT1-207ENST00000518528 NKAPP1Q8N9T2 125 aa5.06□□□□□ -1.6
PVT1-207ENST00000518528 C2orf88Q9BSF0 95 aa5.06□□□□□ -1.6
PVT1-207ENST00000518528 NDUFA12Q9UI09 145 aa5.06□□□□□ -1.6
PVT1-207ENST00000518528 HMSDA8MTL9 139 aa5.05□□□□□ -1.6
PVT1-207ENST00000518528 CKS2P33552 79 aa5.05□□□□□ -1.6
PVT1-207ENST00000518528 KRTAP13-1Q8IUC0 172 aa5.05□□□□□ -1.6
PVT1-207ENST00000518528 ALKBH7Q9BT30 221 aaPredicted RBP5.05□□□□□ -1.6
PVT1-207ENST00000518528 KRTAP4-1Q9BYQ7 146 aa5.05□□□□□ -1.6
PVT1-207ENST00000518528 TRBV24-1A0A075B6N3 115 aa5.04□□□□□ -1.6
PVT1-207ENST00000518528 F8VRH5 84 aa5.04□□□□□ -1.6
PVT1-207ENST00000518528 SMLR1H3BR10 107 aa5.04□□□□□ -1.6
PVT1-207ENST00000518528 RAB5AP20339 215 aa5.04□□□□□ -1.6
PVT1-207ENST00000518528 TEX43Q6ZNM6 134 aa5.04□□□□□ -1.6
PVT1-207ENST00000518528 Q8IZM0 81 aa5.04□□□□□ -1.6
PVT1-207ENST00000518528 FAM104AQ969W3 186 aa5.04□□□□□ -1.6
PVT1-207ENST00000518528 TMEM141Q96I45 108 aa5.04□□□□□ -1.6
PVT1-207ENST00000518528 SMIM2Q9BVW6 85 aa5.04□□□□□ -1.6
PVT1-207ENST00000518528 KRTAP9-7A8MTY7 169 aa5.03□□□□□ -1.6
PVT1-207ENST00000518528 TMEM250H0YL14 139 aa5.03□□□□□ -1.6
PVT1-207ENST00000518528 CXCL5P42830 114 aa5.03□□□□□ -1.6
PVT1-207ENST00000518528 PNRC1Q12796 327 aaPredicted RBP5.03□□□□□ -1.6
PVT1-207ENST00000518528 MRPL51Q4U2R6 128 aaKnown RBP5.03□□□□□ -1.6
PVT1-207ENST00000518528 FAM104BQ5XKR9 115 aa5.03□□□□□ -1.6
PVT1-207ENST00000518528 DAND5Q8N907 189 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms