RNA–Protein interactions for RNA: ENST00000516847.1

RN7SKP88-201, Transcript of RNA, 7SK small nuclear pseudogene 88, humanhuman

BASIC

Gene RN7SKP88, Length 250 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP88-201ENST00000516847 SSBP3-AS1Q7Z2R9 100 aa0.27□□□□□ -2.37
RN7SKP88-201ENST00000516847 VAMP8Q9BV40 100 aa0.27□□□□□ -2.37
RN7SKP88-201ENST00000516847 CNFNQ9BYD5 112 aa0.27□□□□□ -2.37
RN7SKP88-201ENST00000516847 NPVFQ9HCQ7 196 aa0.27□□□□□ -2.37
RN7SKP88-201ENST00000516847 V9GYS6 101 aa0.27□□□□□ -2.37
RN7SKP88-201ENST00000516847 CACNA1HO95180 2353 aa0.27□□□□□ -2.37
RN7SKP88-201ENST00000516847 IQSEC2Q5JU85 1478 aa0.27□□□□□ -2.37
RN7SKP88-201ENST00000516847 EPRSP07814 1512 aaKnown RBP0.27□□□□□ -2.37
RN7SKP88-201ENST00000516847 TOP2BQ02880 1626 aa0.27□□□□□ -2.37
RN7SKP88-201ENST00000516847 MARF1Q9Y4F3 1742 aaKnown RBP0.27□□□□□ -2.37
RN7SKP88-201ENST00000516847 BTAF1O14981 1849 aa0.27□□□□□ -2.37
RN7SKP88-201ENST00000516847 A0A1B0GWA3 101 aa0.26□□□□□ -2.37
RN7SKP88-201ENST00000516847 FAM223BA6NKX1 122 aa0.26□□□□□ -2.37
RN7SKP88-201ENST00000516847 SYS1-DBNDD2H3BUS1 97 aa0.26□□□□□ -2.37
RN7SKP88-201ENST00000516847 BCE1O60756 84 aa0.26□□□□□ -2.37
RN7SKP88-201ENST00000516847 HAMPP81172 84 aa0.26□□□□□ -2.37
RN7SKP88-201ENST00000516847 KRTAP4-1Q9BYQ7 146 aa0.26□□□□□ -2.37
RN7SKP88-201ENST00000516847 PLEKHH2Q8IVE3 1493 aa0.26□□□□□ -2.37
RN7SKP88-201ENST00000516847 ABCC2Q92887 1545 aa0.26□□□□□ -2.37
RN7SKP88-201ENST00000516847 LRP6O75581 1613 aa0.26□□□□□ -2.37
RN7SKP88-201ENST00000516847 BDP1A6H8Y1 2624 aa0.26□□□□□ -2.37
RN7SKP88-201ENST00000516847 ANK2Q01484 3957 aa0.25□□□□□ -2.37
RN7SKP88-201ENST00000516847 NUP188Q5SRE5 1749 aa0.25□□□□□ -2.37
RN7SKP88-201ENST00000516847 SCN7AQ01118 1682 aa0.25□□□□□ -2.37
RN7SKP88-201ENST00000516847 LAMC1P11047 1609 aa0.25□□□□□ -2.37
RN7SKP88-201ENST00000516847 ARHGEF12Q9NZN5 1544 aa0.25□□□□□ -2.37
RN7SKP88-201ENST00000516847 FANCAO15360 1455 aa0.25□□□□□ -2.37
RN7SKP88-201ENST00000516847 RAPGEF2Q9Y4G8 1499 aa0.25□□□□□ -2.37
RN7SKP88-201ENST00000516847 A0A0G2JND7 137 aa0.25□□□□□ -2.37
RN7SKP88-201ENST00000516847 PVALEFA0A1B0GWK0 134 aa0.25□□□□□ -2.37
RN7SKP88-201ENST00000516847 M0R3E3 92 aa0.25□□□□□ -2.37
RN7SKP88-201ENST00000516847 PRH1P02810 166 aa0.25□□□□□ -2.37
RN7SKP88-201ENST00000516847 UQCRHP07919 91 aa0.25□□□□□ -2.37
RN7SKP88-201ENST00000516847 GNG2P59768 71 aa0.25□□□□□ -2.37
RN7SKP88-201ENST00000516847 HMGN3Q15651 99 aa0.25□□□□□ -2.37
RN7SKP88-201ENST00000516847 PYY3Q5JQD4 70 aa0.25□□□□□ -2.37
RN7SKP88-201ENST00000516847 C10orf113Q5VZT2 155 aa0.25□□□□□ -2.37
RN7SKP88-201ENST00000516847 SFTA2Q6UW10 78 aa0.25□□□□□ -2.37
RN7SKP88-201ENST00000516847 ALKAL2Q6UX46 152 aa0.25□□□□□ -2.37
RN7SKP88-201ENST00000516847 PRO1933Q9H354 126 aa0.25□□□□□ -2.37
RN7SKP88-201ENST00000516847 Q9H521 79 aa0.25□□□□□ -2.37
RN7SKP88-201ENST00000516847 SPCS1Q9Y6A9 102 aa0.25□□□□□ -2.37
RN7SKP88-201ENST00000516847 TNCP24821 2201 aa0.25□□□□□ -2.37
RN7SKP88-201ENST00000516847 OTOGQ6ZRI0 2925 aa0.24□□□□□ -2.37
RN7SKP88-201ENST00000516847 KIAA1551Q9HCM1 1747 aa0.24□□□□□ -2.37
RN7SKP88-201ENST00000516847 CLTCQ00610 1675 aaKnown RBP0.24□□□□□ -2.37
RN7SKP88-201ENST00000516847 ERCC6L2Q5T890 1561 aa0.24□□□□□ -2.37
RN7SKP88-201ENST00000516847 ABCC3O15438 1527 aa0.24□□□□□ -2.37
RN7SKP88-201ENST00000516847 ATP10BO94823 1461 aa0.24□□□□□ -2.37
RN7SKP88-201ENST00000516847 GOLGA4Q13439 2230 aaKnown RBP0.24□□□□□ -2.37
RN7SKP88-201ENST00000516847 UQCRHLA0A096LP55 91 aa0.24□□□□□ -2.37
RN7SKP88-201ENST00000516847 TRBV6-1A0A0K0K1D8 114 aa0.24□□□□□ -2.37
RN7SKP88-201ENST00000516847 C7orf77A4D0Y5 90 aa0.24□□□□□ -2.37
RN7SKP88-201ENST00000516847 FAUP35544 74 aaKnown RBP0.24□□□□□ -2.37
RN7SKP88-201ENST00000516847 PSMG4Q5JS54 123 aa0.24□□□□□ -2.37
RN7SKP88-201ENST00000516847 SPINK6Q6UWN8 80 aa0.24□□□□□ -2.37
RN7SKP88-201ENST00000516847 TP53AIP1Q9HCN2 124 aa0.24□□□□□ -2.37
RN7SKP88-201ENST00000516847 ABCA12Q86UK0 2595 aa0.24□□□□□ -2.37
RN7SKP88-201ENST00000516847 TTC28Q96AY4 2481 aa0.24□□□□□ -2.37
RN7SKP88-201ENST00000516847 CACNA1EQ15878 2313 aa0.24□□□□□ -2.37
RN7SKP88-201ENST00000516847 DNAJC13O75165 2243 aa0.23□□□□□ -2.37
RN7SKP88-201ENST00000516847 RB1CC1Q8TDY2 1594 aa0.23□□□□□ -2.37
RN7SKP88-201ENST00000516847 BAZ1AQ9NRL2 1556 aaPredicted RBP0.23□□□□□ -2.37
RN7SKP88-201ENST00000516847 TULP4Q9NRJ4 1543 aa0.23□□□□□ -2.37
RN7SKP88-201ENST00000516847 C1orf167Q5SNV9 1468 aa0.23□□□□□ -2.37
RN7SKP88-201ENST00000516847 NRXN1Q9ULB1 1477 aa0.23□□□□□ -2.37
RN7SKP88-201ENST00000516847 POLQO75417 2590 aa0.23□□□□□ -2.37
RN7SKP88-201ENST00000516847 CEP162Q5TB80 1403 aa0.23□□□□□ -2.37
RN7SKP88-201ENST00000516847 PLCE1Q9P212 2302 aa0.23□□□□□ -2.37
RN7SKP88-201ENST00000516847 I3L2K1 104 aa0.23□□□□□ -2.37
RN7SKP88-201ENST00000516847 KRTAP2-3P0C7H8 128 aa0.23□□□□□ -2.37
RN7SKP88-201ENST00000516847 ARMS2P0C7Q2 107 aa0.23□□□□□ -2.37
RN7SKP88-201ENST00000516847 ZNF720Q7Z2F6 126 aa0.23□□□□□ -2.37
RN7SKP88-201ENST00000516847 C9orf62Q8N4C0 152 aa0.23□□□□□ -2.37
RN7SKP88-201ENST00000516847 DEFB123Q8N688 67 aa0.23□□□□□ -2.37
RN7SKP88-201ENST00000516847 LINC01600Q96MT4 127 aa0.23□□□□□ -2.37
RN7SKP88-201ENST00000516847 SMR3AQ99954 134 aa0.23□□□□□ -2.37
RN7SKP88-201ENST00000516847 C20orf78Q9BR46 151 aa0.23□□□□□ -2.37
RN7SKP88-201ENST00000516847 KRTAP2-4Q9BYR9 128 aa0.23□□□□□ -2.37
RN7SKP88-201ENST00000516847 KRTAP2-1Q9BYU5 128 aa0.23□□□□□ -2.37
RN7SKP88-201ENST00000516847 RABAC1Q9UI14 185 aa0.23□□□□□ -2.37
RN7SKP88-201ENST00000516847 A0A0G2JMZ2 1700 aa0.23□□□□□ -2.37
RN7SKP88-201ENST00000516847 XRN1Q8IZH2 1706 aaKnown RBP0.23□□□□□ -2.37
RN7SKP88-201ENST00000516847 SHPRHQ149N8 1683 aa0.23□□□□□ -2.37
RN7SKP88-201ENST00000516847 BIVM-ERCC5R4GMW8 1640 aa0.23□□□□□ -2.37
RN7SKP88-201ENST00000516847 CUX1P39880 1505 aa0.23□□□□□ -2.37
RN7SKP88-201ENST00000516847 F8P00451 2351 aa0.23□□□□□ -2.37
RN7SKP88-201ENST00000516847 C2CD3Q4AC94 2353 aa0.23□□□□□ -2.37
RN7SKP88-201ENST00000516847 MYH4Q9Y623 1939 aa0.23□□□□□ -2.37
RN7SKP88-201ENST00000516847 ANKRD17O75179 2603 aaKnown RBP0.22□□□□□ -2.37
RN7SKP88-201ENST00000516847 RGPD4Q7Z3J3 1758 aa0.22□□□□□ -2.37
RN7SKP88-201ENST00000516847 PLIN4Q96Q06 1357 aa0.22□□□□□ -2.37
RN7SKP88-201ENST00000516847 TPRP12270 2363 aaKnown RBP0.22□□□□□ -2.37
RN7SKP88-201ENST00000516847 TRBV7-4A0A0J9YYF1 115 aa0.22□□□□□ -2.37
RN7SKP88-201ENST00000516847 H3BQF6 201 aa0.22□□□□□ -2.37
RN7SKP88-201ENST00000516847 SMIM11AP58511 58 aa0.22□□□□□ -2.37
RN7SKP88-201ENST00000516847 PIGYQ3MUY2 71 aa0.22□□□□□ -2.37
RN7SKP88-201ENST00000516847 ETDBQ3ZM63 59 aa0.22□□□□□ -2.37
RN7SKP88-201ENST00000516847 Q8IZM0 81 aa0.22□□□□□ -2.37
RN7SKP88-201ENST00000516847 LCN9Q8WX39 176 aa0.22□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms