RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 FAM103A1Q9BTL3 118 aaKnown RBP1.63□□□□□ -2.15
RBM28-207ENST00000488249 GNG13Q9P2W3 67 aa1.63□□□□□ -2.15
RBM28-207ENST00000488249 TSC2P49815 1807 aa1.63□□□□□ -2.15
RBM28-207ENST00000488249 ADGRB2O60241 1585 aa1.63□□□□□ -2.15
RBM28-207ENST00000488249 GPR179Q6PRD1 2367 aa1.63□□□□□ -2.15
RBM28-207ENST00000488249 NUP188Q5SRE5 1749 aa1.63□□□□□ -2.15
RBM28-207ENST00000488249 SPTBP11277 2137 aa1.63□□□□□ -2.15
RBM28-207ENST00000488249 USP32Q8NFA0 1604 aa1.62□□□□□ -2.15
RBM28-207ENST00000488249 MED12Q93074 2177 aa1.62□□□□□ -2.15
RBM28-207ENST00000488249 ZNF236Q9UL36 1845 aa1.62□□□□□ -2.15
RBM28-207ENST00000488249 A0A0D9SFI3 127 aa1.62□□□□□ -2.15
RBM28-207ENST00000488249 A0A0G2JQZ4 141 aa1.62□□□□□ -2.15
RBM28-207ENST00000488249 D6R8Y8 96 aa1.62□□□□□ -2.15
RBM28-207ENST00000488249 PPYP01298 95 aa1.62□□□□□ -2.15
RBM28-207ENST00000488249 IGLV3-1P01715 115 aa1.62□□□□□ -2.15
RBM28-207ENST00000488249 CCL3L1P16619 93 aa1.62□□□□□ -2.15
RBM28-207ENST00000488249 S100A3P33764 101 aa1.62□□□□□ -2.15
RBM28-207ENST00000488249 MYO7BQ6PIF6 2116 aa1.62□□□□□ -2.15
RBM28-207ENST00000488249 MUSTN1Q8IVN3 82 aa1.62□□□□□ -2.15
RBM28-207ENST00000488249 FDCSPQ8NFU4 85 aa1.62□□□□□ -2.15
RBM28-207ENST00000488249 SPACA4Q8TDM5 124 aa1.62□□□□□ -2.15
RBM28-207ENST00000488249 C4orf3Q8WVX3 66 aa1.62□□□□□ -2.15
RBM28-207ENST00000488249 POLR1AO95602 1720 aaPredicted RBP1.62□□□□□ -2.15
RBM28-207ENST00000488249 DLEC1Q9Y238 1755 aa1.62□□□□□ -2.15
RBM28-207ENST00000488249 UNC13CQ8NB66 2214 aa1.62□□□□□ -2.15
RBM28-207ENST00000488249 COL4A1P02462 1669 aa1.61□□□□□ -2.15
RBM28-207ENST00000488249 SHPRHQ149N8 1683 aa1.61□□□□□ -2.15
RBM28-207ENST00000488249 NHSQ6T4R5 1651 aa1.61□□□□□ -2.15
RBM28-207ENST00000488249 ABCC6O95255 1503 aa1.61□□□□□ -2.15
RBM28-207ENST00000488249 UBR3Q6ZT12 1888 aa1.61□□□□□ -2.15
RBM28-207ENST00000488249 PARP4Q9UKK3 1724 aaKnown RBP1.61□□□□□ -2.15
RBM28-207ENST00000488249 MYO7AQ13402 2215 aa1.61□□□□□ -2.15
RBM28-207ENST00000488249 IGKV3D-7A0A0C4DH55 119 aa1.61□□□□□ -2.15
RBM28-207ENST00000488249 IGKV3OR2-268A0A0C4DH90 116 aa1.61□□□□□ -2.15
RBM28-207ENST00000488249 TRBV6-5A0A0K0K1A5 114 aa1.61□□□□□ -2.15
RBM28-207ENST00000488249 TRBV6-4A0A1B0GX49 114 aa1.61□□□□□ -2.15
RBM28-207ENST00000488249 PDE6GP18545 87 aa1.61□□□□□ -2.15
RBM28-207ENST00000488249 DEFB134Q4QY38 66 aa1.61□□□□□ -2.15
RBM28-207ENST00000488249 Q86TA4 180 aa1.61□□□□□ -2.15
RBM28-207ENST00000488249 COX7B2Q8TF08 81 aa1.61□□□□□ -2.15
RBM28-207ENST00000488249 PPP1R1CQ8WVI7 109 aa1.61□□□□□ -2.15
RBM28-207ENST00000488249 SNURFQ9Y675 71 aa1.61□□□□□ -2.15
RBM28-207ENST00000488249 ANKRD36A6QL64 1941 aa1.61□□□□□ -2.15
RBM28-207ENST00000488249 CEP192Q8TEP8 1941 aa1.61□□□□□ -2.15
RBM28-207ENST00000488249 CICQ96RK0 1608 aaPredicted RBP1.61□□□□□ -2.15
RBM28-207ENST00000488249 SHROOM3Q8TF72 1996 aa1.61□□□□□ -2.15
RBM28-207ENST00000488249 TNRC6BQ9UPQ9 1833 aaKnown RBP1.61□□□□□ -2.15
RBM28-207ENST00000488249 ARFGEF3Q5TH69 2177 aa1.61□□□□□ -2.15
RBM28-207ENST00000488249 RREB1Q92766 1687 aa1.61□□□□□ -2.15
RBM28-207ENST00000488249 PRRC2BQ5JSZ5 2229 aaKnown RBP1.6□□□□□ -2.15
RBM28-207ENST00000488249 PKD1L3Q7Z443 1732 aa1.6□□□□□ -2.15
RBM28-207ENST00000488249 LRP6O75581 1613 aa1.6□□□□□ -2.15
RBM28-207ENST00000488249 BIVM-ERCC5R4GMW8 1640 aa1.6□□□□□ -2.15
RBM28-207ENST00000488249 A0A087WVE0 104 aa1.6□□□□□ -2.15
RBM28-207ENST00000488249 TRBV7-4A0A0J9YYF1 115 aa1.6□□□□□ -2.15
RBM28-207ENST00000488249 F8VRH5 84 aa1.6□□□□□ -2.15
RBM28-207ENST00000488249 JMJD7-PLA2G4BH0Y9G9 81 aa1.6□□□□□ -2.15
RBM28-207ENST00000488249 M0R3E3 92 aa1.6□□□□□ -2.15
RBM28-207ENST00000488249 CCL18P55774 89 aa1.6□□□□□ -2.15
RBM28-207ENST00000488249 ATXN8Q156A1 80 aa1.6□□□□□ -2.15
RBM28-207ENST00000488249 FAM74A4Q5TZK3 123 aa1.6□□□□□ -2.15
RBM28-207ENST00000488249 ZNF563Q8TA94 476 aa1.6□□□□□ -2.15
RBM28-207ENST00000488249 AMELXQ99217 191 aa1.6□□□□□ -2.15
RBM28-207ENST00000488249 TTTY12Q9BZ98 90 aa1.6□□□□□ -2.15
RBM28-207ENST00000488249 ZFHX2Q9C0A1 2572 aaPredicted RBP1.6□□□□□ -2.15
RBM28-207ENST00000488249 HIVEP2P31629 2446 aa1.6□□□□□ -2.15
RBM28-207ENST00000488249 MDC1Q14676 2089 aaKnown RBP1.6□□□□□ -2.15
RBM28-207ENST00000488249 ABCA4P78363 2273 aa1.6□□□□□ -2.15
RBM28-207ENST00000488249 KIAA0586Q9BVV6 1533 aa1.6□□□□□ -2.15
RBM28-207ENST00000488249 TIAM2Q8IVF5 1701 aa1.6□□□□□ -2.15
RBM28-207ENST00000488249 TET1Q8NFU7 2136 aa1.6□□□□□ -2.15
RBM28-207ENST00000488249 SPAG17Q6Q759 2223 aa1.59□□□□□ -2.15
RBM28-207ENST00000488249 ZNF831Q5JPB2 1677 aa1.59□□□□□ -2.15
RBM28-207ENST00000488249 ATP7BP35670 1465 aa1.59□□□□□ -2.15
RBM28-207ENST00000488249 HCRTO43612 131 aa1.59□□□□□ -2.15
RBM28-207ENST00000488249 DNAL4O96015 105 aa1.59□□□□□ -2.15
RBM28-207ENST00000488249 PRR9Q5T870 116 aa1.59□□□□□ -2.15
RBM28-207ENST00000488249 GDF5OSQ5U4N7 250 aa1.59□□□□□ -2.15
RBM28-207ENST00000488249 EFCAB6Q5THR3 1501 aa1.59□□□□□ -2.16
RBM28-207ENST00000488249 SEC16AO15027 2179 aa1.58□□□□□ -2.16
RBM28-207ENST00000488249 PCDH15Q96QU1 1955 aa1.58□□□□□ -2.16
RBM28-207ENST00000488249 COL14A1Q05707 1796 aaKnown RBP1.58□□□□□ -2.16
RBM28-207ENST00000488249 A0A087WTM6 91 aa1.58□□□□□ -2.16
RBM28-207ENST00000488249 NBDYA0A0U1RRE5 68 aa1.58□□□□□ -2.16
RBM28-207ENST00000488249 WFDC10AQ9H1F0 79 aa1.58□□□□□ -2.16
RBM28-207ENST00000488249 LINC01558Q9Y6Z2 57 aa1.58□□□□□ -2.16
RBM28-207ENST00000488249 R4GMQ9 66 aa1.58□□□□□ -2.16
RBM28-207ENST00000488249 ABCC8Q09428 1581 aa1.58□□□□□ -2.16
RBM28-207ENST00000488249 CLTCL1P53675 1640 aa1.58□□□□□ -2.16
RBM28-207ENST00000488249 RICTORQ6R327 1708 aa1.57□□□□□ -2.16
RBM28-207ENST00000488249 CPS1P31327 1500 aa1.57□□□□□ -2.16
RBM28-207ENST00000488249 DNAJC13O75165 2243 aa1.57□□□□□ -2.16
RBM28-207ENST00000488249 A0A1W2PNN7 141 aa1.57□□□□□ -2.16
RBM28-207ENST00000488249 M0R135 149 aa1.57□□□□□ -2.16
RBM28-207ENST00000488249 RNASE3P12724 160 aaKnown RBP1.57□□□□□ -2.16
RBM28-207ENST00000488249 HMGA1P17096 107 aaKnown RBP1.57□□□□□ -2.16
RBM28-207ENST00000488249 RPL37AP61513 92 aaKnown RBP1.57□□□□□ -2.16
RBM28-207ENST00000488249 C10orf55Q5SWW7 151 aa1.57□□□□□ -2.16
RBM28-207ENST00000488249 DEFB132Q7Z7B7 95 aa1.57□□□□□ -2.16
RBM28-207ENST00000488249 PLAC8Q9NZF1 115 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms