RNA–Protein interactions for RNA: ENST00000479555.1

CMSS1-204, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 4

Gene CMSS1, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-204ENST00000479555 TRBV7-4A0A0J9YYF1 115 aa2.8□□□□□ -1.96
CMSS1-204ENST00000479555 BUB1B-PAK6H3BSN5 160 aa2.8□□□□□ -1.96
CMSS1-204ENST00000479555 CCL21O00585 134 aa2.8□□□□□ -1.96
CMSS1-204ENST00000479555 RTL8CO15255 209 aa2.8□□□□□ -1.96
CMSS1-204ENST00000479555 CCL4P13236 92 aa2.8□□□□□ -1.96
CMSS1-204ENST00000479555 KRTAP10-1P60331 282 aa2.8□□□□□ -1.96
CMSS1-204ENST00000479555 DEFB114Q30KQ6 69 aa2.8□□□□□ -1.96
CMSS1-204ENST00000479555 ATP11AUNQ6ZP68 121 aa2.8□□□□□ -1.96
CMSS1-204ENST00000479555 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.8□□□□□ -1.96
CMSS1-204ENST00000479555 LINC00167Q96N53 147 aa2.8□□□□□ -1.96
CMSS1-204ENST00000479555 LIMD2Q9BT23 127 aa2.8□□□□□ -1.96
CMSS1-204ENST00000479555 KIF25-AS1Q9Y6Z4 181 aa2.8□□□□□ -1.96
CMSS1-204ENST00000479555 IGHV3-21A0A0B4J1V1 117 aa2.79□□□□□ -1.96
CMSS1-204ENST00000479555 E7EQL1 145 aa2.79□□□□□ -1.96
CMSS1-204ENST00000479555 M0QY20 66 aa2.79□□□□□ -1.96
CMSS1-204ENST00000479555 CTSGP08311 255 aa2.79□□□□□ -1.96
CMSS1-204ENST00000479555 KRTAP1-4P0C5Y4 121 aa2.79□□□□□ -1.96
CMSS1-204ENST00000479555 RPL39P62891 51 aaKnown RBP2.79□□□□□ -1.96
CMSS1-204ENST00000479555 NREPQ16612 68 aa2.79□□□□□ -1.96
CMSS1-204ENST00000479555 PHF5AQ7RTV0 110 aaKnown RBP2.79□□□□□ -1.96
CMSS1-204ENST00000479555 LINC01560Q8TB33 94 aa2.79□□□□□ -1.96
CMSS1-204ENST00000479555 Q9UF83 564 aa2.79□□□□□ -1.96
CMSS1-204ENST00000479555 TTC28Q96AY4 2481 aa2.79□□□□□ -1.96
CMSS1-204ENST00000479555 NCOR1O75376 2440 aa2.79□□□□□ -1.96
CMSS1-204ENST00000479555 SPAG17Q6Q759 2223 aa2.78□□□□□ -1.96
CMSS1-204ENST00000479555 IGHV3-64A0A075B6Q5 118 aa2.78□□□□□ -1.96
CMSS1-204ENST00000479555 IGHV3OR16-12A0A075B7B8 117 aa2.78□□□□□ -1.96
CMSS1-204ENST00000479555 IGHV3-64DA0A0J9YX35 117 aa2.78□□□□□ -1.96
CMSS1-204ENST00000479555 IGLV1-47P01700 117 aa2.78□□□□□ -1.96
CMSS1-204ENST00000479555 IGHV1-46P01743 117 aa2.78□□□□□ -1.96
CMSS1-204ENST00000479555 RNASE3P12724 160 aaKnown RBP2.78□□□□□ -1.96
CMSS1-204ENST00000479555 ELOF1P60002 83 aaKnown RBP2.78□□□□□ -1.96
CMSS1-204ENST00000479555 ASB16-AS1Q495Z4 193 aa2.78□□□□□ -1.96
CMSS1-204ENST00000479555 LINC00242Q5T6M2 205 aa2.78□□□□□ -1.96
CMSS1-204ENST00000479555 REG3GQ6UW15 175 aa2.78□□□□□ -1.96
CMSS1-204ENST00000479555 Q8N2B8 174 aa2.78□□□□□ -1.96
CMSS1-204ENST00000479555 Q8N6K4 173 aa2.78□□□□□ -1.96
CMSS1-204ENST00000479555 SND1-IT1Q9HBX3 110 aa2.78□□□□□ -1.96
CMSS1-204ENST00000479555 DPM3Q9P2X0 92 aa2.78□□□□□ -1.96
CMSS1-204ENST00000479555 TECTAO75443 2155 aa2.78□□□□□ -1.96
CMSS1-204ENST00000479555 PRRC2AP48634 2157 aaKnown RBP2.78□□□□□ -1.96
CMSS1-204ENST00000479555 CUL9Q8IWT3 2517 aa2.77□□□□□ -1.97
CMSS1-204ENST00000479555 KLLNB2CW77 178 aa2.77□□□□□ -1.97
CMSS1-204ENST00000479555 H3BUA1 57 aa2.77□□□□□ -1.97
CMSS1-204ENST00000479555 NDUFA4O00483 81 aa2.77□□□□□ -1.97
CMSS1-204ENST00000479555 BPY2O14599 106 aa2.77□□□□□ -1.97
CMSS1-204ENST00000479555 LECT2O14960 151 aa2.77□□□□□ -1.97
CMSS1-204ENST00000479555 LY6G6DO95868 133 aa2.77□□□□□ -1.97
CMSS1-204ENST00000479555 APOC4P55056 127 aa2.77□□□□□ -1.97
CMSS1-204ENST00000479555 LINC00315P59091 139 aa2.77□□□□□ -1.97
CMSS1-204ENST00000479555 MINOS1Q5TGZ0 78 aa2.77□□□□□ -1.97
CMSS1-204ENST00000479555 FAM74A4Q5TZK3 123 aa2.77□□□□□ -1.97
CMSS1-204ENST00000479555 MIR7-3HGQ8N6C7 128 aa2.77□□□□□ -1.97
CMSS1-204ENST00000479555 ZFAND2AQ8N6M9 145 aa2.77□□□□□ -1.97
CMSS1-204ENST00000479555 ITLN2Q8WWU7 325 aaPredicted RBP2.77□□□□□ -1.97
CMSS1-204ENST00000479555 CCL17Q92583 94 aa2.77□□□□□ -1.97
CMSS1-204ENST00000479555 RMI2Q96E14 147 aa2.77□□□□□ -1.97
CMSS1-204ENST00000479555 MINOS1-NBL1R4GNA1 71 aa2.77□□□□□ -1.97
CMSS1-204ENST00000479555 F5P12259 2224 aa2.77□□□□□ -1.97
CMSS1-204ENST00000479555 USF3Q68DE3 2245 aa2.77□□□□□ -1.97
CMSS1-204ENST00000479555 DCHS1Q96JQ0 3298 aa2.76□□□□□ -1.97
CMSS1-204ENST00000479555 LOC100131303A0A0U1RQF7 123 aa2.76□□□□□ -1.97
CMSS1-204ENST00000479555 hDV103S1A0JD37 113 aa2.76□□□□□ -1.97
CMSS1-204ENST00000479555 IGF1P05019 195 aa2.76□□□□□ -1.97
CMSS1-204ENST00000479555 CCL3L1P16619 93 aa2.76□□□□□ -1.97
CMSS1-204ENST00000479555 HAMPP81172 84 aa2.76□□□□□ -1.97
CMSS1-204ENST00000479555 SS18Q15532 418 aa2.76□□□□□ -1.97
CMSS1-204ENST00000479555 LCE1CQ5T751 118 aa2.76□□□□□ -1.97
CMSS1-204ENST00000479555 LCE1BQ5T7P3 118 aa2.76□□□□□ -1.97
CMSS1-204ENST00000479555 IGFL2Q6UWQ7 119 aa2.76□□□□□ -1.97
CMSS1-204ENST00000479555 C7orf65Q6ZTY9 151 aa2.76□□□□□ -1.97
CMSS1-204ENST00000479555 LCA10Q71F78 164 aa2.76□□□□□ -1.97
CMSS1-204ENST00000479555 Q8N814 137 aa2.76□□□□□ -1.97
CMSS1-204ENST00000479555 CNEP1R1Q8N9A8 125 aa2.76□□□□□ -1.97
CMSS1-204ENST00000479555 SMIM11BQ8TCY0 68 aa2.76□□□□□ -1.97
CMSS1-204ENST00000479555 ZNF625Q96I27 306 aaPredicted RBP2.76□□□□□ -1.97
CMSS1-204ENST00000479555 RBM12B-AS1Q9P1G2 102 aa2.76□□□□□ -1.97
CMSS1-204ENST00000479555 SNURFQ9Y675 71 aa2.76□□□□□ -1.97
CMSS1-204ENST00000479555 ZDBF2Q9HCK1 2354 aa2.76□□□□□ -1.97
CMSS1-204ENST00000479555 ASPMQ8IZT6 3477 aa2.76□□□□□ -1.97
CMSS1-204ENST00000479555 IGHV1OR15-1A0A075B7D0 117 aa2.75□□□□□ -1.97
CMSS1-204ENST00000479555 TRBV6-8A0A0A6YYG3 113 aa2.75□□□□□ -1.97
CMSS1-204ENST00000479555 TRBV6-4A0A1B0GX49 114 aa2.75□□□□□ -1.97
CMSS1-204ENST00000479555 H3BPC8 53 aa2.75□□□□□ -1.97
CMSS1-204ENST00000479555 M0R378 163 aa2.75□□□□□ -1.97
CMSS1-204ENST00000479555 NCR3O14931 201 aa2.75□□□□□ -1.97
CMSS1-204ENST00000479555 TFF1P04155 84 aa2.75□□□□□ -1.97
CMSS1-204ENST00000479555 COX17Q14061 63 aa2.75□□□□□ -1.97
CMSS1-204ENST00000479555 Q6ZQT0 140 aa2.75□□□□□ -1.97
CMSS1-204ENST00000479555 C6orf223Q8N319 242 aa2.75□□□□□ -1.97
CMSS1-204ENST00000479555 NKAPP1Q8N9T2 125 aa2.75□□□□□ -1.97
CMSS1-204ENST00000479555 DEFB108BQ8NET1 73 aa2.75□□□□□ -1.97
CMSS1-204ENST00000479555 USMG5Q96IX5 58 aa2.75□□□□□ -1.97
CMSS1-204ENST00000479555 BPESC1Q9GZL8 116 aa2.75□□□□□ -1.97
CMSS1-204ENST00000479555 LINC00474Q9P2X8 69 aa2.75□□□□□ -1.97
CMSS1-204ENST00000479555 C22orf24Q9Y442 160 aa2.75□□□□□ -1.97
CMSS1-204ENST00000479555 SDK1Q7Z5N4 2213 aa2.74□□□□□ -1.97
CMSS1-204ENST00000479555 IGHV3-72A0A0B4J1Y9 119 aa2.74□□□□□ -1.97
CMSS1-204ENST00000479555 TRBV10-1A0A0K0K1A3 114 aa2.74□□□□□ -1.97
CMSS1-204ENST00000479555 PINLYPA6NC86 204 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms