RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 IGHV3OR16-12A0A075B7B8 117 aa4.02□□□□□ -1.77
HDAC8-216ENST00000470998 IGHV1-58A0A0C4DH39 117 aa4.02□□□□□ -1.77
HDAC8-216ENST00000470998 A0A0J9YXY3 114 aa4.02□□□□□ -1.77
HDAC8-216ENST00000470998 UBE2L6O14933 153 aa4.02□□□□□ -1.77
HDAC8-216ENST00000470998 GIG44P09565 113 aaPredicted RBP4.02□□□□□ -1.77
HDAC8-216ENST00000470998 UBE2D1P51668 147 aa4.02□□□□□ -1.77
HDAC8-216ENST00000470998 RPL24P83731 157 aaKnown RBP4.02□□□□□ -1.77
HDAC8-216ENST00000470998 SRSF9Q13242 221 aaKnown RBP eCLIP4.02□□□□□ -1.77
HDAC8-216ENST00000470998 KRTAP15-1Q3LI76 137 aa4.02□□□□□ -1.77
HDAC8-216ENST00000470998 ZNRF2Q8NHG8 242 aa4.02□□□□□ -1.77
HDAC8-216ENST00000470998 TMEM101Q96IK0 257 aa4.02□□□□□ -1.77
HDAC8-216ENST00000470998 ZNF479Q96JC4 524 aa4.02□□□□□ -1.77
HDAC8-216ENST00000470998 TMEM243Q9BU79 118 aa4.02□□□□□ -1.77
HDAC8-216ENST00000470998 GEMIN7Q9H840 131 aaKnown RBP4.02□□□□□ -1.77
HDAC8-216ENST00000470998 NHP2Q9NX24 153 aaKnown RBP4.02□□□□□ -1.77
HDAC8-216ENST00000470998 SPCS1Q9Y6A9 102 aa4.02□□□□□ -1.77
HDAC8-216ENST00000470998 IGHV3-73A0A0B4J1V6 119 aa4.01□□□□□ -1.77
HDAC8-216ENST00000470998 A0A0B4J2C4 111 aa4.01□□□□□ -1.77
HDAC8-216ENST00000470998 TRGV4A0A0C4DH28 118 aa4.01□□□□□ -1.77
HDAC8-216ENST00000470998 PLAC8L1A1L4L8 177 aa4.01□□□□□ -1.77
HDAC8-216ENST00000470998 H3BUT2 72 aa4.01□□□□□ -1.77
HDAC8-216ENST00000470998 CCL25O15444 150 aa4.01□□□□□ -1.77
HDAC8-216ENST00000470998 LINC00694P0DN24 101 aa4.01□□□□□ -1.77
HDAC8-216ENST00000470998 IFITM1P13164 125 aa4.01□□□□□ -1.77
HDAC8-216ENST00000470998 C12orf74Q32Q52 190 aa4.01□□□□□ -1.77
HDAC8-216ENST00000470998 AMMECR1LQ6DCA0 310 aa4.01□□□□□ -1.77
HDAC8-216ENST00000470998 ZFAND6Q6FIF0 208 aa4.01□□□□□ -1.77
HDAC8-216ENST00000470998 Q6ZTI0 123 aa4.01□□□□□ -1.77
HDAC8-216ENST00000470998 SH2D6Q7Z4S9 175 aa4.01□□□□□ -1.77
HDAC8-216ENST00000470998 SBSPONQ8IVN8 264 aa4.01□□□□□ -1.77
HDAC8-216ENST00000470998 MAPKAPK5-AS1Q8N8E1 139 aa4.01□□□□□ -1.77
HDAC8-216ENST00000470998 MUC7Q8TAX7 377 aa4.01□□□□□ -1.77
HDAC8-216ENST00000470998 PHLDA1Q8WV24 401 aaPredicted RBP4.01□□□□□ -1.77
HDAC8-216ENST00000470998 VSIG2Q96IQ7 327 aa4.01□□□□□ -1.77
HDAC8-216ENST00000470998 NOP10Q9NPE3 64 aaKnown RBP4.01□□□□□ -1.77
HDAC8-216ENST00000470998 TRBV20-1A0A075B6N2 111 aa4□□□□□ -1.77
HDAC8-216ENST00000470998 TRAV26-1A0A087WT03 109 aa4□□□□□ -1.77
HDAC8-216ENST00000470998 A0A0J9YXV3 536 aa4□□□□□ -1.77
HDAC8-216ENST00000470998 K7ERU9 68 aa4□□□□□ -1.77
HDAC8-216ENST00000470998 NDUFA1O15239 70 aa4□□□□□ -1.77
HDAC8-216ENST00000470998 IGHV3-30P01768 117 aa4□□□□□ -1.77
HDAC8-216ENST00000470998 IGHV3-30-3P0DP02 117 aa4□□□□□ -1.77
HDAC8-216ENST00000470998 IGHV3-30-5P0DP03 117 aa4□□□□□ -1.77
HDAC8-216ENST00000470998 IGHV4-30-4P0DP06 118 aa4□□□□□ -1.77
HDAC8-216ENST00000470998 MIFP14174 115 aa4□□□□□ -1.77
HDAC8-216ENST00000470998 RPL35AP18077 110 aaKnown RBP4□□□□□ -1.77
HDAC8-216ENST00000470998 TCTAP57738 103 aa4□□□□□ -1.77
HDAC8-216ENST00000470998 HERV-K104P63124 156 aa4□□□□□ -1.77
HDAC8-216ENST00000470998 CIRBPQ14011 172 aaKnown RBP4□□□□□ -1.77
HDAC8-216ENST00000470998 Q6ZUT4 128 aa4□□□□□ -1.77
HDAC8-216ENST00000470998 TM2D3Q9BRN9 247 aa4□□□□□ -1.77
HDAC8-216ENST00000470998 SPANXDQ9BXN6 97 aa4□□□□□ -1.77
HDAC8-216ENST00000470998 TTTY13Q9BZ97 58 aa4□□□□□ -1.77
HDAC8-216ENST00000470998 SPANXCQ9NY87 97 aa4□□□□□ -1.77
HDAC8-216ENST00000470998 NDUFA12Q9UI09 145 aa4□□□□□ -1.77
HDAC8-216ENST00000470998 RYR3Q15413 4870 aa3.99□□□□□ -1.77
HDAC8-216ENST00000470998 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.99□□□□□ -1.77
HDAC8-216ENST00000470998 IGLV5-39A0A0G2JS06 123 aa3.99□□□□□ -1.77
HDAC8-216ENST00000470998 IGKV2-29A2NJV5 120 aaPredicted RBP3.99□□□□□ -1.77
HDAC8-216ENST00000470998 IGLL5B9A064 214 aa3.99□□□□□ -1.77
HDAC8-216ENST00000470998 F8W1H4 67 aa3.99□□□□□ -1.77
HDAC8-216ENST00000470998 J3QR89 54 aa3.99□□□□□ -1.77
HDAC8-216ENST00000470998 GAGE7O76087 117 aa3.99□□□□□ -1.77
HDAC8-216ENST00000470998 GAGE12FP0CL80 117 aa3.99□□□□□ -1.77
HDAC8-216ENST00000470998 GAGE12GP0CL81 117 aa3.99□□□□□ -1.77
HDAC8-216ENST00000470998 GAGE12IP0CL82 117 aa3.99□□□□□ -1.77
HDAC8-216ENST00000470998 TSPEAR-AS2P59090 65 aa3.99□□□□□ -1.77
HDAC8-216ENST00000470998 CASC10Q5T4H9 136 aa3.99□□□□□ -1.77
HDAC8-216ENST00000470998 LINC01561Q8N1V8 128 aa3.99□□□□□ -1.77
HDAC8-216ENST00000470998 C10orf126Q8N4M7 172 aa3.99□□□□□ -1.77
HDAC8-216ENST00000470998 PRO0255Q9UI72 69 aa3.99□□□□□ -1.77
HDAC8-216ENST00000470998 MUC4Q99102 2169 aa3.99□□□□□ -1.77
HDAC8-216ENST00000470998 HUWE1Q7Z6Z7 4374 aaKnown RBP3.98□□□□□ -1.77
HDAC8-216ENST00000470998 TRBV6-8A0A0A6YYG3 113 aa3.98□□□□□ -1.77
HDAC8-216ENST00000470998 GAGE12JA6NER3 117 aa3.98□□□□□ -1.77
HDAC8-216ENST00000470998 EMP1P54849 157 aa3.98□□□□□ -1.77
HDAC8-216ENST00000470998 GAGE4Q13068 117 aa3.98□□□□□ -1.77
HDAC8-216ENST00000470998 GAGE5Q13069 117 aa3.98□□□□□ -1.77
HDAC8-216ENST00000470998 MIAQ16674 131 aa3.98□□□□□ -1.77
HDAC8-216ENST00000470998 FAM104AQ969W3 186 aa3.98□□□□□ -1.77
HDAC8-216ENST00000470998 RAB37Q96AX2 223 aa3.98□□□□□ -1.77
HDAC8-216ENST00000470998 CDC42SE2Q9NRR3 84 aa3.98□□□□□ -1.77
HDAC8-216ENST00000470998 PRO1854Q9UHT4 67 aa3.98□□□□□ -1.77
HDAC8-216ENST00000470998 CBY1Q9Y3M2 126 aa3.98□□□□□ -1.77
HDAC8-216ENST00000470998 SORL1Q92673 2214 aa3.97□□□□□ -1.77
HDAC8-216ENST00000470998 IGHV3-38A0A0C4DH36 116 aa3.97□□□□□ -1.77
HDAC8-216ENST00000470998 A0A1B0GUV1 79 aa3.97□□□□□ -1.77
HDAC8-216ENST00000470998 M0QXV9 152 aa3.97□□□□□ -1.77
HDAC8-216ENST00000470998 PRM2P04554 102 aa3.97□□□□□ -1.77
HDAC8-216ENST00000470998 LINC00242Q5T6M2 205 aa3.97□□□□□ -1.77
HDAC8-216ENST00000470998 OPRPNQ99935 248 aaPredicted RBP3.97□□□□□ -1.77
HDAC8-216ENST00000470998 WFDC10AQ9H1F0 79 aa3.97□□□□□ -1.77
HDAC8-216ENST00000470998 RYR2Q92736 4967 aa3.96□□□□□ -1.78
HDAC8-216ENST00000470998 LCE6AA0A183 80 aa3.96□□□□□ -1.78
HDAC8-216ENST00000470998 SMIM1B2RUZ4 78 aa3.96□□□□□ -1.78
HDAC8-216ENST00000470998 K7ERJ3 54 aa3.96□□□□□ -1.78
HDAC8-216ENST00000470998 ATP5G1P05496 136 aa3.96□□□□□ -1.78
HDAC8-216ENST00000470998 OCIAD2Q56VL3 154 aa3.96□□□□□ -1.78
HDAC8-216ENST00000470998 NTM-AS1Q6ZSK4 140 aa3.96□□□□□ -1.78
HDAC8-216ENST00000470998 ATP6V0E2Q8NHE4 81 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 138.4 ms