RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 BTAF1O14981 1849 aa0.32□□□□□ -2.36
PRPF40A-205ENST00000467114 A0A1B0GWA3 101 aa0.32□□□□□ -2.36
PRPF40A-205ENST00000467114 FAM223BA6NKX1 122 aa0.32□□□□□ -2.36
PRPF40A-205ENST00000467114 C10orf113Q5VZT2 155 aa0.32□□□□□ -2.36
PRPF40A-205ENST00000467114 U3KQA8 63 aa0.32□□□□□ -2.36
PRPF40A-205ENST00000467114 EHBP1L1Q8N3D4 1523 aa0.32□□□□□ -2.36
PRPF40A-205ENST00000467114 SYNE1Q8NF91 8797 aaKnown RBP0.31□□□□□ -2.36
PRPF40A-205ENST00000467114 NSD3Q9BZ95 1437 aa0.31□□□□□ -2.36
PRPF40A-205ENST00000467114 PLCE1Q9P212 2302 aa0.31□□□□□ -2.36
PRPF40A-205ENST00000467114 I3L2K1 104 aa0.31□□□□□ -2.36
PRPF40A-205ENST00000467114 SAA2P0DJI9 122 aaPredicted RBP0.31□□□□□ -2.36
PRPF40A-205ENST00000467114 C2CD3Q4AC94 2353 aa0.31□□□□□ -2.36
PRPF40A-205ENST00000467114 BIVM-ERCC5R4GMW8 1640 aa0.31□□□□□ -2.36
PRPF40A-205ENST00000467114 WFDC2Q14508 124 aa0.3□□□□□ -2.36
PRPF40A-205ENST00000467114 PIGYQ3MUY2 71 aa0.3□□□□□ -2.36
PRPF40A-205ENST00000467114 ACBD7Q8N6N7 88 aa0.3□□□□□ -2.36
PRPF40A-205ENST00000467114 FDCSPQ8NFU4 85 aa0.3□□□□□ -2.36
PRPF40A-205ENST00000467114 ANK2Q01484 3957 aa0.3□□□□□ -2.36
PRPF40A-205ENST00000467114 ZNF292O60281 2723 aa0.29□□□□□ -2.36
PRPF40A-205ENST00000467114 FXYD6-FXYD2A0A087WZ82 144 aa0.29□□□□□ -2.36
PRPF40A-205ENST00000467114 TRBV6-1A0A0K0K1D8 114 aa0.29□□□□□ -2.36
PRPF40A-205ENST00000467114 AP4S1Q9Y587 144 aa0.29□□□□□ -2.36
PRPF40A-205ENST00000467114 NHSL1Q5SYE7 1610 aa0.28□□□□□ -2.36
PRPF40A-205ENST00000467114 MYO7BQ6PIF6 2116 aa0.28□□□□□ -2.36
PRPF40A-205ENST00000467114 NDUFC1O43677 76 aa0.28□□□□□ -2.36
PRPF40A-205ENST00000467114 MT-ATP8P03928 68 aa0.28□□□□□ -2.36
PRPF40A-205ENST00000467114 PRO1933Q9H354 126 aa0.28□□□□□ -2.36
PRPF40A-205ENST00000467114 CNTLNQ9NXG0 1405 aa0.28□□□□□ -2.37
PRPF40A-205ENST00000467114 MAST4O15021 2626 aa0.28□□□□□ -2.37
PRPF40A-205ENST00000467114 UNC79Q9P2D8 2635 aa0.28□□□□□ -2.37
PRPF40A-205ENST00000467114 ADGRL2O95490 1459 aa0.28□□□□□ -2.37
PRPF40A-205ENST00000467114 POLA1P09884 1462 aaPredicted RBP0.28□□□□□ -2.37
PRPF40A-205ENST00000467114 ARHGEF12Q9NZN5 1544 aa0.28□□□□□ -2.37
PRPF40A-205ENST00000467114 DIP2CQ9Y2E4 1556 aa0.28□□□□□ -2.37
PRPF40A-205ENST00000467114 GOLGA4Q13439 2230 aaKnown RBP0.28□□□□□ -2.37
PRPF40A-205ENST00000467114 TOP2BQ02880 1626 aa0.27□□□□□ -2.37
PRPF40A-205ENST00000467114 A0A0G2JND7 137 aa0.27□□□□□ -2.37
PRPF40A-205ENST00000467114 NCMAPQ5T1S8 102 aa0.27□□□□□ -2.37
PRPF40A-205ENST00000467114 LINC01600Q96MT4 127 aa0.27□□□□□ -2.37
PRPF40A-205ENST00000467114 PMCHL2Q9BQD1 86 aa0.27□□□□□ -2.37
PRPF40A-205ENST00000467114 CACFD1Q9UGQ2 172 aa0.27□□□□□ -2.37
PRPF40A-205ENST00000467114 MPC2O95563 127 aa0.26□□□□□ -2.37
PRPF40A-205ENST00000467114 LINC00032P0C843 101 aa0.26□□□□□ -2.37
PRPF40A-205ENST00000467114 VAMP8Q9BV40 100 aa0.26□□□□□ -2.37
PRPF40A-205ENST00000467114 LINC00846Q9NV44 126 aa0.26□□□□□ -2.37
PRPF40A-205ENST00000467114 ABCA3Q99758 1704 aa0.26□□□□□ -2.37
PRPF40A-205ENST00000467114 TOPAZ1Q8N9V7 1692 aa0.25□□□□□ -2.37
PRPF40A-205ENST00000467114 MRC2Q9UBG0 1479 aa0.25□□□□□ -2.37
PRPF40A-205ENST00000467114 M0R143 59 aa0.25□□□□□ -2.37
PRPF40A-205ENST00000467114 DEFB109BQ30KR1 87 aa0.25□□□□□ -2.37
PRPF40A-205ENST00000467114 Q5VSD8 79 aa0.25□□□□□ -2.37
PRPF40A-205ENST00000467114 LCN9Q8WX39 176 aa0.25□□□□□ -2.37
PRPF40A-205ENST00000467114 DPY30Q9C005 99 aa0.25□□□□□ -2.37
PRPF40A-205ENST00000467114 NCOR2Q9Y618 2525 aa0.25□□□□□ -2.37
PRPF40A-205ENST00000467114 PTPRQQ9UMZ3 2332 aa0.25□□□□□ -2.37
PRPF40A-205ENST00000467114 USF3Q68DE3 2245 aa0.25□□□□□ -2.37
PRPF40A-205ENST00000467114 CHD1O14646 1710 aa0.24□□□□□ -2.37
PRPF40A-205ENST00000467114 SCN7AQ01118 1682 aa0.24□□□□□ -2.37
PRPF40A-205ENST00000467114 PAPPAQ13219 1627 aa0.24□□□□□ -2.37
PRPF40A-205ENST00000467114 MAGI1Q96QZ7 1491 aaPredicted RBP0.24□□□□□ -2.37
PRPF40A-205ENST00000467114 TRBV7-4A0A0J9YYF1 115 aa0.24□□□□□ -2.37
PRPF40A-205ENST00000467114 C7orf77A4D0Y5 90 aa0.24□□□□□ -2.37
PRPF40A-205ENST00000467114 PMCHL1Q16048 86 aa0.24□□□□□ -2.37
PRPF40A-205ENST00000467114 COL4A6Q14031 1691 aa0.24□□□□□ -2.37
PRPF40A-205ENST00000467114 C1orf167Q5SNV9 1468 aa0.23□□□□□ -2.37
PRPF40A-205ENST00000467114 IGSF10Q6WRI0 2623 aa0.23□□□□□ -2.37
PRPF40A-205ENST00000467114 ANKRD36BQ8N2N9 1353 aa0.23□□□□□ -2.37
PRPF40A-205ENST00000467114 LRP1Q07954 4544 aaKnown RBP0.23□□□□□ -2.37
PRPF40A-205ENST00000467114 AKAP6Q13023 2319 aa0.23□□□□□ -2.37
PRPF40A-205ENST00000467114 SPRR1AP35321 89 aa0.23□□□□□ -2.37
PRPF40A-205ENST00000467114 TRGV9Q99603 122 aa0.23□□□□□ -2.37
PRPF40A-205ENST00000467114 PRDM15P57071 1507 aaPredicted RBP0.23□□□□□ -2.37
PRPF40A-205ENST00000467114 TRBV25-1A0A075B6N4 114 aa0.22□□□□□ -2.37
PRPF40A-205ENST00000467114 A0A087WVE0 104 aa0.22□□□□□ -2.37
PRPF40A-205ENST00000467114 LINC00959A0A1B0GUT2 108 aa0.22□□□□□ -2.37
PRPF40A-205ENST00000467114 ATOX1O00244 68 aa0.22□□□□□ -2.37
PRPF40A-205ENST00000467114 ASIPP42127 132 aa0.22□□□□□ -2.37
PRPF40A-205ENST00000467114 DEFB123Q8N688 67 aa0.22□□□□□ -2.37
PRPF40A-205ENST00000467114 PKDREJQ9NTG1 2253 aa0.22□□□□□ -2.37
PRPF40A-205ENST00000467114 MLH3Q9UHC1 1453 aa0.22□□□□□ -2.37
PRPF40A-205ENST00000467114 HRNRQ86YZ3 2850 aaPredicted RBP0.21□□□□□ -2.38
PRPF40A-205ENST00000467114 PDCD11Q14690 1871 aaKnown RBP0.21□□□□□ -2.38
PRPF40A-205ENST00000467114 COX6B1P14854 86 aa0.21□□□□□ -2.38
PRPF40A-205ENST00000467114 PSMG4Q5JS54 123 aa0.21□□□□□ -2.38
PRPF40A-205ENST00000467114 SERP2Q8N6R1 65 aa0.21□□□□□ -2.38
PRPF40A-205ENST00000467114 TEX14Q8IWB6 1497 aa0.21□□□□□ -2.38
PRPF40A-205ENST00000467114 PPRC1Q5VV67 1664 aaKnown RBP0.21□□□□□ -2.38
PRPF40A-205ENST00000467114 H7BZZ5 65 aa0.2□□□□□ -2.38
PRPF40A-205ENST00000467114 S100A8P05109 93 aa0.2□□□□□ -2.38
PRPF40A-205ENST00000467114 UQCRHP07919 91 aa0.2□□□□□ -2.38
PRPF40A-205ENST00000467114 COL5A1-AS1Q5SY13 56 aa0.2□□□□□ -2.38
PRPF40A-205ENST00000467114 GAPVD1Q14C86 1478 aa0.2□□□□□ -2.38
PRPF40A-205ENST00000467114 TULP4Q9NRJ4 1543 aa0.19□□□□□ -2.38
PRPF40A-205ENST00000467114 ZFHX3Q15911 3703 aa0.19□□□□□ -2.38
PRPF40A-205ENST00000467114 DOPEY2Q9Y3R5 2298 aa0.19□□□□□ -2.38
PRPF40A-205ENST00000467114 FYCO1Q9BQS8 1478 aa0.19□□□□□ -2.38
PRPF40A-205ENST00000467114 FAUP35544 74 aaKnown RBP0.19□□□□□ -2.38
PRPF40A-205ENST00000467114 CELSR1Q9NYQ6 3014 aa0.19□□□□□ -2.38
PRPF40A-205ENST00000467114 UBR5O95071 2799 aaPredicted RBP0.18□□□□□ -2.38
PRPF40A-205ENST00000467114 VPS8Q8N3P4 1428 aa0.18□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms