RNA–Protein interactions for RNA: ENST00000466508.5

PPP1R3F-203, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 1,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-203ENST00000466508 GCSHP23434 173 aa14.56□□□□□ -0.08
PPP1R3F-203ENST00000466508 HUWE1Q7Z6Z7 4374 aaKnown RBP14.56□□□□□ -0.08
PPP1R3F-203ENST00000466508 IGKV3OR2-268A0A0C4DH90 116 aa14.55□□□□□ -0.08
PPP1R3F-203ENST00000466508 CEND1Q8N111 149 aa14.55□□□□□ -0.08
PPP1R3F-203ENST00000466508 HIST1H4GQ99525 98 aa14.55□□□□□ -0.08
PPP1R3F-203ENST00000466508 TM2D2Q9BX73 214 aa14.55□□□□□ -0.08
PPP1R3F-203ENST00000466508 IGLV5-39A0A0G2JS06 123 aa14.54□□□□□ -0.08
PPP1R3F-203ENST00000466508 A6NDN8 102 aa14.53□□□□□ -0.08
PPP1R3F-203ENST00000466508 DEFB131BA0A096LNP1 70 aa14.52□□□□□ -0.08
PPP1R3F-203ENST00000466508 SMIM1B2RUZ4 78 aa14.52□□□□□ -0.08
PPP1R3F-203ENST00000466508 FXYD2P54710 66 aa14.52□□□□□ -0.08
PPP1R3F-203ENST00000466508 LINC00959A0A1B0GUT2 108 aa14.52□□□□□ -0.09
PPP1R3F-203ENST00000466508 ZFAND6Q6FIF0 208 aa14.52□□□□□ -0.09
PPP1R3F-203ENST00000466508 LYPD5Q6UWN5 251 aa14.52□□□□□ -0.09
PPP1R3F-203ENST00000466508 C10orf126Q8N4M7 172 aa14.52□□□□□ -0.09
PPP1R3F-203ENST00000466508 NDUFA12Q9UI09 145 aa14.51□□□□□ -0.09
PPP1R3F-203ENST00000466508 SPANXB1Q9NS25 103 aaPredicted RBP14.5□□□□□ -0.09
PPP1R3F-203ENST00000466508 K7EP13 123 aa14.5□□□□□ -0.09
PPP1R3F-203ENST00000466508 TGP01266 2768 aa14.5□□□□□ -0.09
PPP1R3F-203ENST00000466508 IGHV3OR16-9A0A0B4J2B5 98 aa14.49□□□□□ -0.09
PPP1R3F-203ENST00000466508 TAX1BP3O14907 124 aa14.49□□□□□ -0.09
PPP1R3F-203ENST00000466508 PTTG1IPP53801 180 aa14.49□□□□□ -0.09
PPP1R3F-203ENST00000466508 SRSF9Q13242 221 aaKnown RBP eCLIP14.49□□□□□ -0.09
PPP1R3F-203ENST00000466508 Q8N3U1 123 aa14.49□□□□□ -0.09
PPP1R3F-203ENST00000466508 A0A0J9YXY3 114 aa14.48□□□□□ -0.09
PPP1R3F-203ENST00000466508 SS18Q15532 418 aa14.48□□□□□ -0.09
PPP1R3F-203ENST00000466508 LINC00269Q8N2A0 174 aa14.48□□□□□ -0.09
PPP1R3F-203ENST00000466508 CCL25O15444 150 aa14.47□□□□□ -0.09
PPP1R3F-203ENST00000466508 ANGP03950 147 aaKnown RBP14.47□□□□□ -0.09
PPP1R3F-203ENST00000466508 CLPSL2Q6UWE3 100 aa14.47□□□□□ -0.09
PPP1R3F-203ENST00000466508 COX11Q9Y6N1 276 aa14.47□□□□□ -0.09
PPP1R3F-203ENST00000466508 Q6ZVH6 145 aa14.46□□□□□ -0.09
PPP1R3F-203ENST00000466508 PRKDCP78527 4128 aaKnown RBP14.46□□□□□ -0.09
PPP1R3F-203ENST00000466508 NDUFA1O15239 70 aa14.46□□□□□ -0.1
PPP1R3F-203ENST00000466508 COL7A1Q02388 2944 aa14.46□□□□□ -0.1
PPP1R3F-203ENST00000466508 A0A087WZ39 114 aa14.45□□□□□ -0.1
PPP1R3F-203ENST00000466508 TRAV10A0A0B4J240 114 aa14.45□□□□□ -0.1
PPP1R3F-203ENST00000466508 TMEM238C9JI98 176 aa14.44□□□□□ -0.1
PPP1R3F-203ENST00000466508 REG3AQ06141 175 aa14.44□□□□□ -0.1
PPP1R3F-203ENST00000466508 NHP2Q9NX24 153 aaKnown RBP14.44□□□□□ -0.1
PPP1R3F-203ENST00000466508 STAB2Q8WWQ8 2551 aa14.43□□□□□ -0.1
PPP1R3F-203ENST00000466508 IGHV3-30P01768 117 aa14.43□□□□□ -0.1
PPP1R3F-203ENST00000466508 IGHV3-30-5P0DP03 117 aa14.43□□□□□ -0.1
PPP1R3F-203ENST00000466508 XCL1P47992 114 aa14.43□□□□□ -0.1
PPP1R3F-203ENST00000466508 DNAH9Q9NYC9 4486 aa14.42□□□□□ -0.1
PPP1R3F-203ENST00000466508 SMIM13P0DJ93 91 aa14.42□□□□□ -0.1
PPP1R3F-203ENST00000466508 LITAFQ99732 161 aa14.42□□□□□ -0.1
PPP1R3F-203ENST00000466508 Q9H8V8 135 aa14.42□□□□□ -0.1
PPP1R3F-203ENST00000466508 TMEM238LA0A1B0GVL6 79 aa14.41□□□□□ -0.1
PPP1R3F-203ENST00000466508 A6NJY4 79 aa14.41□□□□□ -0.1
PPP1R3F-203ENST00000466508 C5orf38Q86SI9 138 aa14.41□□□□□ -0.1
PPP1R3F-203ENST00000466508 ESRGQ1W209 222 aa14.4□□□□□ -0.1
PPP1R3F-203ENST00000466508 B9D2Q9BPU9 175 aa14.4□□□□□ -0.1
PPP1R3F-203ENST00000466508 ZNF625Q96I27 306 aaPredicted RBP14.4□□□□□ -0.1
PPP1R3F-203ENST00000466508 K7ERJ3 54 aa14.39□□□□□ -0.11
PPP1R3F-203ENST00000466508 WFDC10BQ8IUB3 73 aa14.39□□□□□ -0.11
PPP1R3F-203ENST00000466508 COX7B2Q8TF08 81 aa14.39□□□□□ -0.11
PPP1R3F-203ENST00000466508 PRR34Q9NV39 138 aa14.39□□□□□ -0.11
PPP1R3F-203ENST00000466508 A0A1B0GWB2 263 aa14.38□□□□□ -0.11
PPP1R3F-203ENST00000466508 TIMM17BO60830 172 aa14.38□□□□□ -0.11
PPP1R3F-203ENST00000466508 CD164L2Q6UWJ8 174 aa14.38□□□□□ -0.11
PPP1R3F-203ENST00000466508 C15orf53Q8NAA6 179 aa14.38□□□□□ -0.11
PPP1R3F-203ENST00000466508 CHCHD10Q8WYQ3 142 aaPredicted RBP14.38□□□□□ -0.11
PPP1R3F-203ENST00000466508 RAB37Q96AX2 223 aa14.38□□□□□ -0.11
PPP1R3F-203ENST00000466508 KLK12Q9UKR0 248 aa14.38□□□□□ -0.11
PPP1R3F-203ENST00000466508 LINC01561Q8N1V8 128 aa14.37□□□□□ -0.11
PPP1R3F-203ENST00000466508 SPANXDQ9BXN6 97 aa14.37□□□□□ -0.11
PPP1R3F-203ENST00000466508 SPANXCQ9NY87 97 aa14.37□□□□□ -0.11
PPP1R3F-203ENST00000466508 IGLV10-54A0A075B6I4 117 aa14.36□□□□□ -0.11
PPP1R3F-203ENST00000466508 C9orf118A6NHY6 69 aa14.36□□□□□ -0.11
PPP1R3F-203ENST00000466508 HERV-K104P63124 156 aa14.36□□□□□ -0.11
PPP1R3F-203ENST00000466508 ADAMTSL4-AS1Q5T5F5 129 aa14.36□□□□□ -0.11
PPP1R3F-203ENST00000466508 IGHV3-33P01772 117 aa14.35□□□□□ -0.11
PPP1R3F-203ENST00000466508 TOMM7Q9P0U1 55 aa14.35□□□□□ -0.11
PPP1R3F-203ENST00000466508 CIRBPQ14011 172 aaKnown RBP14.34□□□□□ -0.11
PPP1R3F-203ENST00000466508 MIAQ16674 131 aa14.34□□□□□ -0.11
PPP1R3F-203ENST00000466508 COX7A2LO14548 114 aa14.33□□□□□ -0.11
PPP1R3F-203ENST00000466508 MUSTN1Q8IVN3 82 aa14.33□□□□□ -0.11
PPP1R3F-203ENST00000466508 RPL24P83731 157 aaKnown RBP14.33□□□□□ -0.12
PPP1R3F-203ENST00000466508 ENHOQ6UWT2 76 aa14.33□□□□□ -0.12
PPP1R3F-203ENST00000466508 H3BUT2 72 aa14.31□□□□□ -0.12
PPP1R3F-203ENST00000466508 CRPP02741 224 aa14.31□□□□□ -0.12
PPP1R3F-203ENST00000466508 PRSS2P07478 247 aa14.31□□□□□ -0.12
PPP1R3F-203ENST00000466508 FOXI1Q12951 378 aa14.31□□□□□ -0.12
PPP1R3F-203ENST00000466508 A4D1N5 150 aa14.3□□□□□ -0.12
PPP1R3F-203ENST00000466508 VAMP3Q15836 100 aa14.3□□□□□ -0.12
PPP1R3F-203ENST00000466508 SFTA2Q6UW10 78 aa14.3□□□□□ -0.12
PPP1R3F-203ENST00000466508 NAA38Q9BRA0 125 aaKnown RBP14.3□□□□□ -0.12
PPP1R3F-203ENST00000466508 LINC01556Q5JQF7 62 aa14.29□□□□□ -0.12
PPP1R3F-203ENST00000466508 MEIG1Q5JSS6 88 aa14.29□□□□□ -0.12
PPP1R3F-203ENST00000466508 Q8IZM0 81 aa14.29□□□□□ -0.12
PPP1R3F-203ENST00000466508 UBE2WQ96B02 151 aa14.29□□□□□ -0.12
PPP1R3F-203ENST00000466508 TRAV8-4A0A0B4J246 113 aa14.29□□□□□ -0.12
PPP1R3F-203ENST00000466508 APOMO95445 188 aa14.29□□□□□ -0.12
PPP1R3F-203ENST00000466508 CFC1BP0CG36 223 aa14.29□□□□□ -0.12
PPP1R3F-203ENST00000466508 CFC1P0CG37 223 aa14.29□□□□□ -0.12
PPP1R3F-203ENST00000466508 IFITM1P13164 125 aa14.28□□□□□ -0.12
PPP1R3F-203ENST00000466508 C6orf226Q5I0X4 101 aa14.28□□□□□ -0.12
PPP1R3F-203ENST00000466508 DAND5Q8N907 189 aa14.28□□□□□ -0.12
PPP1R3F-203ENST00000466508 GAGE12HA6NDE8 117 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms