RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 PAX4O43316 350 aa7.07□□□□□ -1.28
MSH5-211ENST00000463144 EIF4EBP3O60516 100 aaPredicted RBP7.07□□□□□ -1.28
MSH5-211ENST00000463144 APOMO95445 188 aa7.07□□□□□ -1.28
MSH5-211ENST00000463144 CFC1BP0CG36 223 aa7.07□□□□□ -1.28
MSH5-211ENST00000463144 CFC1P0CG37 223 aa7.07□□□□□ -1.28
MSH5-211ENST00000463144 DAD1P61803 113 aa7.07□□□□□ -1.28
MSH5-211ENST00000463144 MUSTN1Q8IVN3 82 aa7.07□□□□□ -1.28
MSH5-211ENST00000463144 C3orf56Q8N813 242 aa7.07□□□□□ -1.28
MSH5-211ENST00000463144 PKD1L1Q8TDX9 2849 aa7.07□□□□□ -1.28
MSH5-211ENST00000463144 A4D1N5 150 aa7.06□□□□□ -1.28
MSH5-211ENST00000463144 TMEM238C9JI98 176 aa7.06□□□□□ -1.28
MSH5-211ENST00000463144 EGFEM1PQ0D2K5 195 aa7.06□□□□□ -1.28
MSH5-211ENST00000463144 PGPEP1Q9NXJ5 209 aa7.06□□□□□ -1.28
MSH5-211ENST00000463144 STAB1Q9NY15 2570 aa7.06□□□□□ -1.28
MSH5-211ENST00000463144 ANK2Q01484 3957 aa7.05□□□□□ -1.28
MSH5-211ENST00000463144 IGKV3OR2-268A0A0C4DH90 116 aa7.05□□□□□ -1.28
MSH5-211ENST00000463144 NDUFA1O15239 70 aa7.05□□□□□ -1.28
MSH5-211ENST00000463144 TSPAN13O95857 204 aa7.05□□□□□ -1.28
MSH5-211ENST00000463144 SHISA2Q6UWI4 295 aa7.05□□□□□ -1.28
MSH5-211ENST00000463144 SPART-AS1P0CW21 52 aa7.04□□□□□ -1.28
MSH5-211ENST00000463144 TRAV26-1A0A087WT03 109 aa7.04□□□□□ -1.28
MSH5-211ENST00000463144 ATP5G1P05496 136 aa7.04□□□□□ -1.28
MSH5-211ENST00000463144 SPANXDQ9BXN6 97 aa7.04□□□□□ -1.28
MSH5-211ENST00000463144 RETNQ9HD89 108 aa7.04□□□□□ -1.28
MSH5-211ENST00000463144 SPANXCQ9NY87 97 aa7.04□□□□□ -1.28
MSH5-211ENST00000463144 DNAH3Q8TD57 4116 aa7.03□□□□□ -1.28
MSH5-211ENST00000463144 RBX1P62877 108 aa7.03□□□□□ -1.28
MSH5-211ENST00000463144 KRTAP21-3Q3LHN1 58 aa7.03□□□□□ -1.28
MSH5-211ENST00000463144 Q9H8V8 135 aa7.03□□□□□ -1.28
MSH5-211ENST00000463144 TIMM17BO60830 172 aa7.03□□□□□ -1.28
MSH5-211ENST00000463144 RPL24P83731 157 aaKnown RBP7.03□□□□□ -1.28
MSH5-211ENST00000463144 MIAQ16674 131 aa7.03□□□□□ -1.28
MSH5-211ENST00000463144 ZNF625Q96I27 306 aaPredicted RBP7.03□□□□□ -1.28
MSH5-211ENST00000463144 IGHV3OR16-9A0A0B4J2B5 98 aa7.02□□□□□ -1.29
MSH5-211ENST00000463144 A0A1B0GUV1 79 aa7.02□□□□□ -1.29
MSH5-211ENST00000463144 TMEM262E9PQX1 116 aa7.02□□□□□ -1.29
MSH5-211ENST00000463144 PRSS2P07478 247 aa7.02□□□□□ -1.29
MSH5-211ENST00000463144 PRO1854Q9UHT4 67 aa7.02□□□□□ -1.29
MSH5-211ENST00000463144 LINC00959A0A1B0GUT2 108 aa7.02□□□□□ -1.29
MSH5-211ENST00000463144 G3V4G9 280 aa7.02□□□□□ -1.29
MSH5-211ENST00000463144 HTN3P15516 51 aa7.02□□□□□ -1.29
MSH5-211ENST00000463144 NPC2P61916 151 aa7.02□□□□□ -1.29
MSH5-211ENST00000463144 SFTA2Q6UW10 78 aa7.02□□□□□ -1.29
MSH5-211ENST00000463144 DAND5Q8N907 189 aa7.02□□□□□ -1.29
MSH5-211ENST00000463144 H3BMG7 143 aa7.01□□□□□ -1.29
MSH5-211ENST00000463144 IGHV3-33P01772 117 aa7.01□□□□□ -1.29
MSH5-211ENST00000463144 Q8N3U1 123 aa7.01□□□□□ -1.29
MSH5-211ENST00000463144 A0A0B4J2C4 111 aa7.01□□□□□ -1.29
MSH5-211ENST00000463144 A0A087WZ39 114 aa6.99□□□□□ -1.29
MSH5-211ENST00000463144 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.99□□□□□ -1.29
MSH5-211ENST00000463144 A0A0U1RRA0 63 aa6.99□□□□□ -1.29
MSH5-211ENST00000463144 C5orf38Q86SI9 138 aa6.99□□□□□ -1.29
MSH5-211ENST00000463144 LOC107984156A0A0G2JMH3 177 aa6.99□□□□□ -1.29
MSH5-211ENST00000463144 CLPSL2Q6UWE3 100 aa6.99□□□□□ -1.29
MSH5-211ENST00000463144 ARL17AQ8IVW1 177 aa6.99□□□□□ -1.29
MSH5-211ENST00000463144 COX7B2Q8TF08 81 aa6.99□□□□□ -1.29
MSH5-211ENST00000463144 MRPL23Q16540 153 aaKnown RBP6.98□□□□□ -1.29
MSH5-211ENST00000463144 PRO0461Q9UI25 63 aa6.98□□□□□ -1.29
MSH5-211ENST00000463144 IFITM1P13164 125 aa6.98□□□□□ -1.29
MSH5-211ENST00000463144 PCP4P48539 62 aa6.98□□□□□ -1.29
MSH5-211ENST00000463144 CIRBPQ14011 172 aaKnown RBP6.98□□□□□ -1.29
MSH5-211ENST00000463144 OCIAD2Q56VL3 154 aa6.98□□□□□ -1.29
MSH5-211ENST00000463144 SOSTDC1Q6X4U4 206 aa6.98□□□□□ -1.29
MSH5-211ENST00000463144 LINC00269Q8N2A0 174 aa6.98□□□□□ -1.29
MSH5-211ENST00000463144 LINC00308Q8TCZ7 52 aa6.98□□□□□ -1.29
MSH5-211ENST00000463144 TOMM7Q9P0U1 55 aa6.98□□□□□ -1.29
MSH5-211ENST00000463144 H7C2G1 150 aa6.97□□□□□ -1.29
MSH5-211ENST00000463144 XCL1P47992 114 aa6.97□□□□□ -1.29
MSH5-211ENST00000463144 HERV-K104P63124 156 aa6.97□□□□□ -1.29
MSH5-211ENST00000463144 WFDC2Q14508 124 aa6.97□□□□□ -1.29
MSH5-211ENST00000463144 ERG28Q9UKR5 140 aa6.97□□□□□ -1.29
MSH5-211ENST00000463144 ICOSQ9Y6W8 199 aa6.97□□□□□ -1.29
MSH5-211ENST00000463144 SS18Q15532 418 aa6.97□□□□□ -1.29
MSH5-211ENST00000463144 MTURNQ8N3F0 131 aa6.97□□□□□ -1.29
MSH5-211ENST00000463144 TEX48A0A1B0GUV7 120 aa6.96□□□□□ -1.3
MSH5-211ENST00000463144 TCL1BO95988 128 aa6.96□□□□□ -1.3
MSH5-211ENST00000463144 PSMB2P49721 201 aa6.96□□□□□ -1.3
MSH5-211ENST00000463144 MEIG1Q5JSS6 88 aa6.96□□□□□ -1.3
MSH5-211ENST00000463144 TENM3Q9P273 2699 aa6.96□□□□□ -1.3
MSH5-211ENST00000463144 F8W1H4 67 aa6.96□□□□□ -1.3
MSH5-211ENST00000463144 LELP1Q5T871 98 aa6.96□□□□□ -1.3
MSH5-211ENST00000463144 MDFIQ99750 246 aa6.96□□□□□ -1.3
MSH5-211ENST00000463144 COL6A5A8TX70 2615 aa6.95□□□□□ -1.3
MSH5-211ENST00000463144 ANGP03950 147 aaKnown RBP6.95□□□□□ -1.3
MSH5-211ENST00000463144 LYPD5Q6UWN5 251 aa6.95□□□□□ -1.3
MSH5-211ENST00000463144 Q6ZTC4 211 aa6.95□□□□□ -1.3
MSH5-211ENST00000463144 C11orf68Q9H3H3 251 aaKnown RBP6.95□□□□□ -1.3
MSH5-211ENST00000463144 SMCPP49901 116 aaPredicted RBP6.94□□□□□ -1.3
MSH5-211ENST00000463144 SH2D6Q7Z4S9 175 aa6.94□□□□□ -1.3
MSH5-211ENST00000463144 PRB2P02812 416 aaPredicted RBP6.94□□□□□ -1.3
MSH5-211ENST00000463144 REG3AQ06141 175 aa6.94□□□□□ -1.3
MSH5-211ENST00000463144 IGLV10-54A0A075B6I4 117 aa6.93□□□□□ -1.3
MSH5-211ENST00000463144 A0A0J9YWU9 116 aa6.93□□□□□ -1.3
MSH5-211ENST00000463144 SCGB1C2P0DMR2 95 aa6.93□□□□□ -1.3
MSH5-211ENST00000463144 CHCHD10Q8WYQ3 142 aaPredicted RBP6.93□□□□□ -1.3
MSH5-211ENST00000463144 TRBV30A0A0K0K1B3 111 aa6.93□□□□□ -1.3
MSH5-211ENST00000463144 TRIAP1O43715 76 aa6.93□□□□□ -1.3
MSH5-211ENST00000463144 KPRPQ5T749 579 aaPredicted RBP6.93□□□□□ -1.3
MSH5-211ENST00000463144 LYRM7Q5U5X0 104 aa6.93□□□□□ -1.3
MSH5-211ENST00000463144 CD164L2Q6UWJ8 174 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 1502.5 ms