RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 BRD3OSQ6XYD6 125 aa1.19□□□□□ -2.22
SMC4-203ENST00000462668 C15orf53Q8NAA6 179 aa1.19□□□□□ -2.22
SMC4-203ENST00000462668 RBP4P02753 201 aa1.18□□□□□ -2.22
SMC4-203ENST00000462668 PDE6GP18545 87 aa1.18□□□□□ -2.22
SMC4-203ENST00000462668 KRTAP12-1P59990 96 aa1.18□□□□□ -2.22
SMC4-203ENST00000462668 PLPP5Q8NEB5 264 aa1.18□□□□□ -2.22
SMC4-203ENST00000462668 TAS2R8Q9NYW2 309 aa1.18□□□□□ -2.22
SMC4-203ENST00000462668 LRP1Q07954 4544 aaKnown RBP1.18□□□□□ -2.22
SMC4-203ENST00000462668 LRRK2Q5S007 2527 aa1.18□□□□□ -2.22
SMC4-203ENST00000462668 NUPR2A6NF83 97 aa1.18□□□□□ -2.22
SMC4-203ENST00000462668 RBP2P50120 134 aa1.18□□□□□ -2.22
SMC4-203ENST00000462668 CSAG1Q6PB30 78 aa1.18□□□□□ -2.22
SMC4-203ENST00000462668 Q8N8P6 123 aa1.18□□□□□ -2.22
SMC4-203ENST00000462668 ZNF431Q8TF32 576 aaPredicted RBP1.18□□□□□ -2.22
SMC4-203ENST00000462668 PPDPFLQ8WWR9 84 aa1.18□□□□□ -2.22
SMC4-203ENST00000462668 OBSCNQ5VST9 7968 aa1.18□□□□□ -2.22
SMC4-203ENST00000462668 CCL25O15444 150 aa1.18□□□□□ -2.22
SMC4-203ENST00000462668 GNG4P50150 75 aa1.18□□□□□ -2.22
SMC4-203ENST00000462668 NEDD8Q15843 81 aa1.18□□□□□ -2.22
SMC4-203ENST00000462668 DYNLRB2Q8TF09 96 aa1.18□□□□□ -2.22
SMC4-203ENST00000462668 ZNF625Q96I27 306 aaPredicted RBP1.18□□□□□ -2.22
SMC4-203ENST00000462668 J3QLW9 94 aa1.17□□□□□ -2.22
SMC4-203ENST00000462668 C5orf17Q8NAS9 161 aa1.17□□□□□ -2.22
SMC4-203ENST00000462668 LINC00526Q96FQ7 95 aa1.17□□□□□ -2.22
SMC4-203ENST00000462668 PPP3R2Q96LZ3 170 aa1.17□□□□□ -2.22
SMC4-203ENST00000462668 TCEAL7Q9BRU2 100 aa1.17□□□□□ -2.22
SMC4-203ENST00000462668 NAA60Q9H7X0 242 aa1.17□□□□□ -2.22
SMC4-203ENST00000462668 NOP16Q9Y3C1 178 aaKnown RBP1.17□□□□□ -2.22
SMC4-203ENST00000462668 CREBBPQ92793 2442 aa1.17□□□□□ -2.22
SMC4-203ENST00000462668 LRP2P98164 4655 aa1.17□□□□□ -2.22
SMC4-203ENST00000462668 PLIN4Q96Q06 1357 aa1.17□□□□□ -2.22
SMC4-203ENST00000462668 TENM3Q9P273 2699 aa1.17□□□□□ -2.22
SMC4-203ENST00000462668 KRTAP12-4P60329 112 aa1.17□□□□□ -2.22
SMC4-203ENST00000462668 MPDZO75970 2070 aa1.17□□□□□ -2.22
SMC4-203ENST00000462668 ANKHD1Q8IWZ3 2542 aaKnown RBP1.16□□□□□ -2.22
SMC4-203ENST00000462668 M0R129 80 aa1.16□□□□□ -2.22
SMC4-203ENST00000462668 CD2P06729 351 aa1.16□□□□□ -2.22
SMC4-203ENST00000462668 CLECL1Q8IZS7 167 aa1.16□□□□□ -2.22
SMC4-203ENST00000462668 SPANXDQ9BXN6 97 aa1.16□□□□□ -2.22
SMC4-203ENST00000462668 HEATR5BQ9P2D3 2071 aa1.16□□□□□ -2.22
SMC4-203ENST00000462668 EDF1O60869 148 aaKnown RBP1.16□□□□□ -2.22
SMC4-203ENST00000462668 MRPS10P82664 201 aaKnown RBP1.16□□□□□ -2.22
SMC4-203ENST00000462668 MPV17LQ2QL34 196 aa1.16□□□□□ -2.22
SMC4-203ENST00000462668 KRTAP13-1Q8IUC0 172 aa1.16□□□□□ -2.22
SMC4-203ENST00000462668 MRPL35Q9NZE8 188 aaKnown RBP1.16□□□□□ -2.22
SMC4-203ENST00000462668 POLEQ07864 2286 aa1.16□□□□□ -2.22
SMC4-203ENST00000462668 RHOHQ15669 191 aa1.16□□□□□ -2.22
SMC4-203ENST00000462668 SMIM7Q9BQ49 75 aa1.16□□□□□ -2.22
SMC4-203ENST00000462668 REG4Q9BYZ8 158 aa1.16□□□□□ -2.22
SMC4-203ENST00000462668 MCRIP1C9JLW8 97 aa1.15□□□□□ -2.22
SMC4-203ENST00000462668 AMELYQ99218 206 aa1.15□□□□□ -2.22
SMC4-203ENST00000462668 ATRQ13535 2644 aa1.15□□□□□ -2.23
SMC4-203ENST00000462668 C3orf85A0A1B0GTC6 90 aa1.15□□□□□ -2.23
SMC4-203ENST00000462668 Q56UQ5 140 aa1.15□□□□□ -2.23
SMC4-203ENST00000462668 OR2T2Q6IF00 324 aa1.15□□□□□ -2.23
SMC4-203ENST00000462668 TTC9CQ8N5M4 171 aa1.15□□□□□ -2.23
SMC4-203ENST00000462668 KRTAP4-3Q9BYR4 195 aa1.15□□□□□ -2.23
SMC4-203ENST00000462668 SDK2Q58EX2 2172 aa1.15□□□□□ -2.23
SMC4-203ENST00000462668 BAZ2BQ9UIF8 2168 aaKnown RBP1.15□□□□□ -2.23
SMC4-203ENST00000462668 SDK1Q7Z5N4 2213 aa1.15□□□□□ -2.23
SMC4-203ENST00000462668 PCNX2A6NKB5 2137 aa1.15□□□□□ -2.23
SMC4-203ENST00000462668 PI4KAP42356 2102 aa1.15□□□□□ -2.23
SMC4-203ENST00000462668 ASCC3Q8N3C0 2202 aaKnown RBP1.14□□□□□ -2.23
SMC4-203ENST00000462668 MGAM2Q2M2H8 2515 aa1.14□□□□□ -2.23
SMC4-203ENST00000462668 SLC25A6P12236 298 aa1.14□□□□□ -2.23
SMC4-203ENST00000462668 TEX261Q6UWH6 196 aa1.14□□□□□ -2.23
SMC4-203ENST00000462668 NDUFA12Q9UI09 145 aa1.14□□□□□ -2.23
SMC4-203ENST00000462668 PRO0461Q9UI25 63 aa1.14□□□□□ -2.23
SMC4-203ENST00000462668 EP300Q09472 2414 aaPredicted RBP1.14□□□□□ -2.23
SMC4-203ENST00000462668 J3QRE1 110 aa1.14□□□□□ -2.23
SMC4-203ENST00000462668 SNX29P2Q8IUI4 249 aa1.14□□□□□ -2.23
SMC4-203ENST00000462668 IGKV4-1P06312 121 aa1.14□□□□□ -2.23
SMC4-203ENST00000462668 SPANXN1Q5VSR9 72 aa1.14□□□□□ -2.23
SMC4-203ENST00000462668 SEC11CQ9BY50 192 aa1.14□□□□□ -2.23
SMC4-203ENST00000462668 GNG8Q9UK08 70 aa1.14□□□□□ -2.23
SMC4-203ENST00000462668 A0A1W2PRS3 328 aa1.13□□□□□ -2.23
SMC4-203ENST00000462668 GEMIN2O14893 280 aaKnown RBP1.13□□□□□ -2.23
SMC4-203ENST00000462668 DMAC1Q96GE9 116 aa1.13□□□□□ -2.23
SMC4-203ENST00000462668 TMEM141Q96I45 108 aa1.13□□□□□ -2.23
SMC4-203ENST00000462668 CACNA1EQ15878 2313 aa1.13□□□□□ -2.23
SMC4-203ENST00000462668 ASXL3Q9C0F0 2248 aa1.13□□□□□ -2.23
SMC4-203ENST00000462668 SCN3AQ9NY46 2000 aa1.13□□□□□ -2.23
SMC4-203ENST00000462668 SPRNQ5BIV9 151 aa1.13□□□□□ -2.23
SMC4-203ENST00000462668 C12orf73Q69YU5 71 aa1.13□□□□□ -2.23
SMC4-203ENST00000462668 LYPD5Q6UWN5 251 aa1.13□□□□□ -2.23
SMC4-203ENST00000462668 KCNRGQ8N5I3 272 aa1.13□□□□□ -2.23
SMC4-203ENST00000462668 POLQO75417 2590 aa1.13□□□□□ -2.23
SMC4-203ENST00000462668 AKAIN1P0CW23 69 aa1.13□□□□□ -2.23
SMC4-203ENST00000462668 LINC00322Q6ZN03 302 aaPredicted RBP1.13□□□□□ -2.23
SMC4-203ENST00000462668 ACBD7Q8N6N7 88 aa1.13□□□□□ -2.23
SMC4-203ENST00000462668 PTPRQQ9UMZ3 2332 aa1.13□□□□□ -2.23
SMC4-203ENST00000462668 TLN1Q9Y490 2541 aaKnown RBP1.13□□□□□ -2.23
SMC4-203ENST00000462668 C2CD3Q4AC94 2353 aa1.13□□□□□ -2.23
SMC4-203ENST00000462668 TRAV30A0A087WSZ9 112 aa1.13□□□□□ -2.23
SMC4-203ENST00000462668 NBDYA0A0U1RRE5 68 aa1.13□□□□□ -2.23
SMC4-203ENST00000462668 GYPBP06028 91 aa1.13□□□□□ -2.23
SMC4-203ENST00000462668 GKN2Q86XP6 184 aa1.13□□□□□ -2.23
SMC4-203ENST00000462668 CRCT1Q9UGL9 99 aa1.13□□□□□ -2.23
SMC4-203ENST00000462668 CATR1Q13166 79 aa1.12□□□□□ -2.23
SMC4-203ENST00000462668 C10orf99Q6UWK7 81 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms