RNA–Protein interactions for RNA: ENST00000457839.6

MBD1-210, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MBD1, Length 2,473 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-210ENST00000457839 SS18L2Q9UHA2 77 aa11.36□□□□□ -0.59
MBD1-210ENST00000457839 LEPROTO15243 131 aa11.36□□□□□ -0.59
MBD1-210ENST00000457839 TSPAN13O95857 204 aa11.36□□□□□ -0.59
MBD1-210ENST00000457839 A6NDN8 102 aa11.35□□□□□ -0.59
MBD1-210ENST00000457839 C12orf74Q32Q52 190 aa11.35□□□□□ -0.59
MBD1-210ENST00000457839 GTF2H5Q6ZYL4 71 aa11.35□□□□□ -0.59
MBD1-210ENST00000457839 TMEM262E9PQX1 116 aa11.35□□□□□ -0.59
MBD1-210ENST00000457839 CEND1Q8N111 149 aa11.35□□□□□ -0.59
MBD1-210ENST00000457839 RAB37Q96AX2 223 aa11.34□□□□□ -0.59
MBD1-210ENST00000457839 NAA38Q9BRA0 125 aaKnown RBP11.34□□□□□ -0.59
MBD1-210ENST00000457839 K7EP34 96 aa11.34□□□□□ -0.59
MBD1-210ENST00000457839 K7ERJ3 54 aa11.34□□□□□ -0.59
MBD1-210ENST00000457839 SIGMAR1Q99720 223 aa11.34□□□□□ -0.59
MBD1-210ENST00000457839 Q8N3U1 123 aa11.33□□□□□ -0.6
MBD1-210ENST00000457839 MRAPQ8TCY5 172 aa11.33□□□□□ -0.6
MBD1-210ENST00000457839 IGHV1-58A0A0C4DH39 117 aa11.32□□□□□ -0.6
MBD1-210ENST00000457839 H3BUT2 72 aa11.32□□□□□ -0.6
MBD1-210ENST00000457839 SRSF9Q13242 221 aaKnown RBP eCLIP11.32□□□□□ -0.6
MBD1-210ENST00000457839 NHP2Q9NX24 153 aaKnown RBP11.32□□□□□ -0.6
MBD1-210ENST00000457839 A0A0J9YWU9 116 aa11.31□□□□□ -0.6
MBD1-210ENST00000457839 H7C423 109 aa11.31□□□□□ -0.6
MBD1-210ENST00000457839 TIRAPP58753 221 aa11.31□□□□□ -0.6
MBD1-210ENST00000457839 CLPSL2Q6UWE3 100 aa11.31□□□□□ -0.6
MBD1-210ENST00000457839 Q6ZTC4 211 aa11.31□□□□□ -0.6
MBD1-210ENST00000457839 C10orf126Q8N4M7 172 aa11.31□□□□□ -0.6
MBD1-210ENST00000457839 TM2D2Q9BX73 214 aa11.31□□□□□ -0.6
MBD1-210ENST00000457839 DEFB121Q5J5C9 76 aa11.31□□□□□ -0.6
MBD1-210ENST00000457839 IGLV5-45A0A087WSX0 123 aa11.3□□□□□ -0.6
MBD1-210ENST00000457839 HERVK_113P63121 156 aa11.3□□□□□ -0.6
MBD1-210ENST00000457839 MTURNQ8N3F0 131 aa11.3□□□□□ -0.6
MBD1-210ENST00000457839 K7EIL1 84 aa11.29□□□□□ -0.6
MBD1-210ENST00000457839 A0A1W2PPM0 123 aa11.28□□□□□ -0.6
MBD1-210ENST00000457839 NDUFA12Q9UI09 145 aa11.28□□□□□ -0.6
MBD1-210ENST00000457839 NANOS2P60321 138 aaKnown RBP11.28□□□□□ -0.6
MBD1-210ENST00000457839 SMIM1B2RUZ4 78 aa11.27□□□□□ -0.61
MBD1-210ENST00000457839 MRPL23Q16540 153 aaKnown RBP11.27□□□□□ -0.61
MBD1-210ENST00000457839 TAL2Q16559 108 aa11.27□□□□□ -0.61
MBD1-210ENST00000457839 A0A0J9YXY3 114 aa11.27□□□□□ -0.61
MBD1-210ENST00000457839 FAM19A3Q7Z5A8 133 aa11.27□□□□□ -0.61
MBD1-210ENST00000457839 ICOSQ9Y6W8 199 aa11.26□□□□□ -0.61
MBD1-210ENST00000457839 SMIM13P0DJ93 91 aa11.26□□□□□ -0.61
MBD1-210ENST00000457839 SPCS1Q9Y6A9 102 aa11.26□□□□□ -0.61
MBD1-210ENST00000457839 COL7A1Q02388 2944 aa11.25□□□□□ -0.61
MBD1-210ENST00000457839 ZNF625Q96I27 306 aaPredicted RBP11.25□□□□□ -0.61
MBD1-210ENST00000457839 HUWE1Q7Z6Z7 4374 aaKnown RBP11.25□□□□□ -0.61
MBD1-210ENST00000457839 TEX48A0A1B0GUV7 120 aa11.24□□□□□ -0.61
MBD1-210ENST00000457839 SMIM20Q8N5G0 67 aa11.24□□□□□ -0.61
MBD1-210ENST00000457839 IGLV5-39A0A0G2JS06 123 aa11.24□□□□□ -0.61
MBD1-210ENST00000457839 LINC00959A0A1B0GUT2 108 aa11.24□□□□□ -0.61
MBD1-210ENST00000457839 IGHV3-30P01768 117 aa11.24□□□□□ -0.61
MBD1-210ENST00000457839 IGHV3-30-5P0DP03 117 aa11.24□□□□□ -0.61
MBD1-210ENST00000457839 ZFAND6Q6FIF0 208 aa11.24□□□□□ -0.61
MBD1-210ENST00000457839 LINC00269Q8N2A0 174 aa11.24□□□□□ -0.61
MBD1-210ENST00000457839 C11orf68Q9H3H3 251 aaKnown RBP11.24□□□□□ -0.61
MBD1-210ENST00000457839 A0A1B0GUV1 79 aa11.23□□□□□ -0.61
MBD1-210ENST00000457839 XCL1P47992 114 aa11.23□□□□□ -0.61
MBD1-210ENST00000457839 ADAMTSL4-AS1Q5T5F5 129 aa11.23□□□□□ -0.61
MBD1-210ENST00000457839 C5orf38Q86SI9 138 aa11.23□□□□□ -0.61
MBD1-210ENST00000457839 FABP2P12104 132 aa11.23□□□□□ -0.61
MBD1-210ENST00000457839 KPRPQ5T749 579 aaPredicted RBP11.23□□□□□ -0.61
MBD1-210ENST00000457839 C11orf45Q8TAV5 145 aa11.23□□□□□ -0.61
MBD1-210ENST00000457839 ANGP03950 147 aaKnown RBP11.22□□□□□ -0.61
MBD1-210ENST00000457839 NPC2P61916 151 aa11.22□□□□□ -0.61
MBD1-210ENST00000457839 Q9H8V8 135 aa11.22□□□□□ -0.61
MBD1-210ENST00000457839 IGLV10-54A0A075B6I4 117 aa11.21□□□□□ -0.61
MBD1-210ENST00000457839 IGHV3OR16-9A0A0B4J2B5 98 aa11.21□□□□□ -0.61
MBD1-210ENST00000457839 A0A0U1RRA0 63 aa11.21□□□□□ -0.61
MBD1-210ENST00000457839 DAND5Q8N907 189 aa11.21□□□□□ -0.61
MBD1-210ENST00000457839 LITAFQ99732 161 aa11.21□□□□□ -0.61
MBD1-210ENST00000457839 SPANXB1Q9NS25 103 aaPredicted RBP11.21□□□□□ -0.61
MBD1-210ENST00000457839 APOMO95445 188 aa11.2□□□□□ -0.62
MBD1-210ENST00000457839 LYPD5Q6UWN5 251 aa11.2□□□□□ -0.62
MBD1-210ENST00000457839 TOMM7Q9P0U1 55 aa11.2□□□□□ -0.62
MBD1-210ENST00000457839 STAB2Q8WWQ8 2551 aa11.2□□□□□ -0.62
MBD1-210ENST00000457839 PRSS2P07478 247 aa11.2□□□□□ -0.62
MBD1-210ENST00000457839 MUSTN1Q8IVN3 82 aa11.2□□□□□ -0.62
MBD1-210ENST00000457839 DEFB131BA0A096LNP1 70 aa11.19□□□□□ -0.62
MBD1-210ENST00000457839 M0QXV9 152 aa11.19□□□□□ -0.62
MBD1-210ENST00000457839 LELP1Q5T871 98 aa11.19□□□□□ -0.62
MBD1-210ENST00000457839 NDUFA1O15239 70 aa11.18□□□□□ -0.62
MBD1-210ENST00000457839 SPATA25Q9BR10 227 aa11.18□□□□□ -0.62
MBD1-210ENST00000457839 EIF4EBP3O60516 100 aaPredicted RBP11.18□□□□□ -0.62
MBD1-210ENST00000457839 TM2D3Q9BRN9 247 aa11.18□□□□□ -0.62
MBD1-210ENST00000457839 REG3AQ06141 175 aa11.17□□□□□ -0.62
MBD1-210ENST00000457839 SS18Q15532 418 aa11.16□□□□□ -0.62
MBD1-210ENST00000457839 SFTA2Q6UW10 78 aa11.16□□□□□ -0.62
MBD1-210ENST00000457839 A0A1B0GWB2 263 aa11.16□□□□□ -0.62
MBD1-210ENST00000457839 GAGE12HA6NDE8 117 aa11.16□□□□□ -0.62
MBD1-210ENST00000457839 IGHV3-33P01772 117 aa11.16□□□□□ -0.62
MBD1-210ENST00000457839 SH2D6Q7Z4S9 175 aa11.16□□□□□ -0.62
MBD1-210ENST00000457839 A0A087WZ39 114 aa11.15□□□□□ -0.62
MBD1-210ENST00000457839 IGLL5B9A064 214 aa11.15□□□□□ -0.62
MBD1-210ENST00000457839 CFC1BP0CG36 223 aa11.15□□□□□ -0.62
MBD1-210ENST00000457839 CFC1P0CG37 223 aa11.15□□□□□ -0.62
MBD1-210ENST00000457839 WFDC10BQ8IUB3 73 aa11.15□□□□□ -0.62
MBD1-210ENST00000457839 KLK12Q9UKR0 248 aa11.15□□□□□ -0.62
MBD1-210ENST00000457839 C5orf47Q569G3 176 aa11.14□□□□□ -0.63
MBD1-210ENST00000457839 COX7B2Q8TF08 81 aa11.14□□□□□ -0.63
MBD1-210ENST00000457839 CHCHD10Q8WYQ3 142 aaPredicted RBP11.14□□□□□ -0.63
MBD1-210ENST00000457839 DNHD1Q96M86 4753 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms