RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 TIRAPP58753 221 aa8.27□□□□□ -1.09
VTA1-203ENST00000452973 TSPAN13O95857 204 aa8.26□□□□□ -1.09
VTA1-203ENST00000452973 ATP6V0E2Q8NHE4 81 aa8.26□□□□□ -1.09
VTA1-203ENST00000452973 CSDC2Q9Y534 153 aaKnown RBP8.26□□□□□ -1.09
VTA1-203ENST00000452973 SMIM9A6NGZ8 99 aa8.26□□□□□ -1.09
VTA1-203ENST00000452973 PAX4O43316 350 aa8.25□□□□□ -1.09
VTA1-203ENST00000452973 DAD1P61803 113 aa8.25□□□□□ -1.09
VTA1-203ENST00000452973 SMAGPQ0VAQ4 97 aa8.25□□□□□ -1.09
VTA1-203ENST00000452973 Q9H8V8 135 aa8.25□□□□□ -1.09
VTA1-203ENST00000452973 CELA1Q9UNI1 258 aa8.25□□□□□ -1.09
VTA1-203ENST00000452973 KRTAP24-1Q3LI83 254 aa8.25□□□□□ -1.09
VTA1-203ENST00000452973 CLPSL2Q6UWE3 100 aa8.25□□□□□ -1.09
VTA1-203ENST00000452973 WFDC9Q8NEX5 89 aa8.25□□□□□ -1.09
VTA1-203ENST00000452973 PRO0255Q9UI72 69 aa8.25□□□□□ -1.09
VTA1-203ENST00000452973 RPL24P83731 157 aaKnown RBP8.24□□□□□ -1.09
VTA1-203ENST00000452973 OCIAD2Q56VL3 154 aa8.24□□□□□ -1.09
VTA1-203ENST00000452973 ZFAND6Q6FIF0 208 aa8.24□□□□□ -1.09
VTA1-203ENST00000452973 TOMM7Q9P0U1 55 aa8.24□□□□□ -1.09
VTA1-203ENST00000452973 SMIM1B2RUZ4 78 aa8.24□□□□□ -1.09
VTA1-203ENST00000452973 PSMB2P49721 201 aa8.24□□□□□ -1.09
VTA1-203ENST00000452973 LITAFQ99732 161 aa8.24□□□□□ -1.09
VTA1-203ENST00000452973 PRO1854Q9UHT4 67 aa8.24□□□□□ -1.09
VTA1-203ENST00000452973 COL6A5A8TX70 2615 aa8.24□□□□□ -1.09
VTA1-203ENST00000452973 IGLV5-45A0A087WSX0 123 aa8.24□□□□□ -1.09
VTA1-203ENST00000452973 C3orf56Q8N813 242 aa8.24□□□□□ -1.09
VTA1-203ENST00000452973 F5H768 121 aa8.23□□□□□ -1.09
VTA1-203ENST00000452973 SCGB1C2P0DMR2 95 aa8.23□□□□□ -1.09
VTA1-203ENST00000452973 Q1RN00 199 aa8.23□□□□□ -1.09
VTA1-203ENST00000452973 LINC00612Q8N6U2 182 aa8.23□□□□□ -1.09
VTA1-203ENST00000452973 NOTCH1P46531 2555 aa8.23□□□□□ -1.09
VTA1-203ENST00000452973 EIF4EBP3O60516 100 aaPredicted RBP8.23□□□□□ -1.09
VTA1-203ENST00000452973 BAHCC1Q9P281 2608 aa8.23□□□□□ -1.09
VTA1-203ENST00000452973 LYRM9A8MSI8 78 aa8.22□□□□□ -1.09
VTA1-203ENST00000452973 PRIMA1Q86XR5 153 aa8.22□□□□□ -1.09
VTA1-203ENST00000452973 TRAV26-1A0A087WT03 109 aa8.22□□□□□ -1.09
VTA1-203ENST00000452973 WFDC2Q14508 124 aa8.22□□□□□ -1.09
VTA1-203ENST00000452973 MEIG1Q5JSS6 88 aa8.22□□□□□ -1.09
VTA1-203ENST00000452973 C5orf38Q86SI9 138 aa8.21□□□□□ -1.09
VTA1-203ENST00000452973 Q8NAQ8 132 aa8.21□□□□□ -1.1
VTA1-203ENST00000452973 RETNQ9HD89 108 aa8.21□□□□□ -1.1
VTA1-203ENST00000452973 IGLV5-39A0A0G2JS06 123 aa8.2□□□□□ -1.1
VTA1-203ENST00000452973 NDUFA1O15239 70 aa8.2□□□□□ -1.1
VTA1-203ENST00000452973 MIAQ16674 131 aa8.2□□□□□ -1.1
VTA1-203ENST00000452973 H7C423 109 aa8.2□□□□□ -1.1
VTA1-203ENST00000452973 KRTAP10-11P60412 298 aa8.2□□□□□ -1.1
VTA1-203ENST00000452973 CIRBPQ14011 172 aaKnown RBP8.2□□□□□ -1.1
VTA1-203ENST00000452973 ERG28Q9UKR5 140 aa8.2□□□□□ -1.1
VTA1-203ENST00000452973 XCL1P47992 114 aa8.2□□□□□ -1.1
VTA1-203ENST00000452973 Q8N3U1 123 aa8.2□□□□□ -1.1
VTA1-203ENST00000452973 C11orf68Q9H3H3 251 aaKnown RBP8.2□□□□□ -1.1
VTA1-203ENST00000452973 ATP5G1P05496 136 aa8.19□□□□□ -1.1
VTA1-203ENST00000452973 MIFP14174 115 aa8.19□□□□□ -1.1
VTA1-203ENST00000452973 SH2D6Q7Z4S9 175 aa8.19□□□□□ -1.1
VTA1-203ENST00000452973 RNF183Q96D59 192 aa8.19□□□□□ -1.1
VTA1-203ENST00000452973 SPART-AS1P0CW21 52 aa8.19□□□□□ -1.1
VTA1-203ENST00000452973 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.18□□□□□ -1.1
VTA1-203ENST00000452973 K7ERU9 68 aa8.18□□□□□ -1.1
VTA1-203ENST00000452973 IGHV3-33P01772 117 aa8.18□□□□□ -1.1
VTA1-203ENST00000452973 ETDBQ3ZM63 59 aa8.18□□□□□ -1.1
VTA1-203ENST00000452973 CYSRT1A8MQ03 144 aa8.18□□□□□ -1.1
VTA1-203ENST00000452973 FAM19A3Q7Z5A8 133 aa8.18□□□□□ -1.1
VTA1-203ENST00000452973 TCL1BO95988 128 aa8.18□□□□□ -1.1
VTA1-203ENST00000452973 SPANXDQ9BXN6 97 aa8.18□□□□□ -1.1
VTA1-203ENST00000452973 SPANXCQ9NY87 97 aa8.18□□□□□ -1.1
VTA1-203ENST00000452973 TEX48A0A1B0GUV7 120 aa8.17□□□□□ -1.1
VTA1-203ENST00000452973 IGLV10-54A0A075B6I4 117 aa8.17□□□□□ -1.1
VTA1-203ENST00000452973 LINC00959A0A1B0GUT2 108 aa8.17□□□□□ -1.1
VTA1-203ENST00000452973 A0A0B4J2C4 111 aa8.16□□□□□ -1.1
VTA1-203ENST00000452973 F8W1H4 67 aa8.16□□□□□ -1.1
VTA1-203ENST00000452973 LINC00269Q8N2A0 174 aa8.16□□□□□ -1.1
VTA1-203ENST00000452973 COX7B2Q8TF08 81 aa8.16□□□□□ -1.1
VTA1-203ENST00000452973 IGHV3OR16-9A0A0B4J2B5 98 aa8.16□□□□□ -1.1
VTA1-203ENST00000452973 ANGP03950 147 aaKnown RBP8.16□□□□□ -1.1
VTA1-203ENST00000452973 WIPF1O43516 503 aa8.15□□□□□ -1.1
VTA1-203ENST00000452973 LYRM7Q5U5X0 104 aa8.15□□□□□ -1.11
VTA1-203ENST00000452973 LINC00308Q8TCZ7 52 aa8.15□□□□□ -1.11
VTA1-203ENST00000452973 TENM3Q9P273 2699 aa8.15□□□□□ -1.11
VTA1-203ENST00000452973 SS18Q15532 418 aa8.14□□□□□ -1.11
VTA1-203ENST00000452973 G3V4G9 280 aa8.14□□□□□ -1.11
VTA1-203ENST00000452973 TIMM17BO60830 172 aa8.14□□□□□ -1.11
VTA1-203ENST00000452973 PRB2P02812 416 aaPredicted RBP8.14□□□□□ -1.11
VTA1-203ENST00000452973 PFN2P35080 140 aa8.14□□□□□ -1.11
VTA1-203ENST00000452973 SOSTDC1Q6X4U4 206 aa8.14□□□□□ -1.11
VTA1-203ENST00000452973 PRO0461Q9UI25 63 aa8.14□□□□□ -1.11
VTA1-203ENST00000452973 RPL13AP40429 203 aaKnown RBP8.13□□□□□ -1.11
VTA1-203ENST00000452973 TRIAP1O43715 76 aa8.13□□□□□ -1.11
VTA1-203ENST00000452973 C6orf226Q5I0X4 101 aa8.13□□□□□ -1.11
VTA1-203ENST00000452973 A0A087WZ39 114 aa8.12□□□□□ -1.11
VTA1-203ENST00000452973 IFITM1P13164 125 aa8.12□□□□□ -1.11
VTA1-203ENST00000452973 LINC00158P58513 81 aa8.12□□□□□ -1.11
VTA1-203ENST00000452973 MRPL23Q16540 153 aaKnown RBP8.12□□□□□ -1.11
VTA1-203ENST00000452973 A0A1B0GUV1 79 aa8.12□□□□□ -1.11
VTA1-203ENST00000452973 SHISA2Q6UWI4 295 aa8.12□□□□□ -1.11
VTA1-203ENST00000452973 SMCPP49901 116 aaPredicted RBP8.12□□□□□ -1.11
VTA1-203ENST00000452973 HERV-K104P63124 156 aa8.12□□□□□ -1.11
VTA1-203ENST00000452973 TRBV20-1A0A075B6N2 111 aa8.11□□□□□ -1.11
VTA1-203ENST00000452973 MIR7-3HGQ8N6C7 128 aa8.11□□□□□ -1.11
VTA1-203ENST00000452973 ICOSQ9Y6W8 199 aa8.11□□□□□ -1.11
VTA1-203ENST00000452973 NBEAL1Q6ZS30 2694 aa8.11□□□□□ -1.11
VTA1-203ENST00000452973 ANK2Q01484 3957 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms