RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 MRPL33O75394 65 aaKnown RBP2.44□□□□□ -2.02
HMGB3P8-201ENST00000449709 CCL3P10147 92 aa2.44□□□□□ -2.02
HMGB3P8-201ENST00000449709 RPL36AP83881 106 aaKnown RBP2.44□□□□□ -2.02
HMGB3P8-201ENST00000449709 LINC01554Q52M75 96 aa2.44□□□□□ -2.02
HMGB3P8-201ENST00000449709 CLEC19AQ6UXS0 136 aa2.44□□□□□ -2.02
HMGB3P8-201ENST00000449709 PRSS33Q8NF86 280 aa2.44□□□□□ -2.02
HMGB3P8-201ENST00000449709 SMIM11BQ8TCY0 68 aa2.44□□□□□ -2.02
HMGB3P8-201ENST00000449709 SEC16AO15027 2179 aa2.44□□□□□ -2.02
HMGB3P8-201ENST00000449709 PI4KAP42356 2102 aa2.44□□□□□ -2.02
HMGB3P8-201ENST00000449709 PRRC2BQ5JSZ5 2229 aaKnown RBP2.44□□□□□ -2.02
HMGB3P8-201ENST00000449709 TRAV21A0A0B4J279 112 aa2.43□□□□□ -2.02
HMGB3P8-201ENST00000449709 TRBV10-1A0A0K0K1A3 114 aa2.43□□□□□ -2.02
HMGB3P8-201ENST00000449709 SPTY2D1-AS1A0A0U1RR47 76 aa2.43□□□□□ -2.02
HMGB3P8-201ENST00000449709 HCG22E2RYF7 251 aa2.43□□□□□ -2.02
HMGB3P8-201ENST00000449709 IGKV3-15P01624 115 aa2.43□□□□□ -2.02
HMGB3P8-201ENST00000449709 IGHV3-9P01782 118 aa2.43□□□□□ -2.02
HMGB3P8-201ENST00000449709 CRPP02741 224 aa2.43□□□□□ -2.02
HMGB3P8-201ENST00000449709 TFF1P04155 84 aa2.43□□□□□ -2.02
HMGB3P8-201ENST00000449709 KRTAP5-11Q6L8G4 156 aa2.43□□□□□ -2.02
HMGB3P8-201ENST00000449709 SPANXA2-OT1Q8N9U9 137 aa2.43□□□□□ -2.02
HMGB3P8-201ENST00000449709 LEAP2Q969E1 77 aa2.43□□□□□ -2.02
HMGB3P8-201ENST00000449709 GAFA1Q96PS6 74 aa2.43□□□□□ -2.02
HMGB3P8-201ENST00000449709 IGHV3-64A0A075B6Q5 118 aa2.42□□□□□ -2.02
HMGB3P8-201ENST00000449709 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.42□□□□□ -2.02
HMGB3P8-201ENST00000449709 IGKV2D-30A0A075B6S6 120 aa2.42□□□□□ -2.02
HMGB3P8-201ENST00000449709 A0A096LNT2 108 aa2.42□□□□□ -2.02
HMGB3P8-201ENST00000449709 IGHV7-81A0A0B4J1V7 117 aa2.42□□□□□ -2.02
HMGB3P8-201ENST00000449709 CLPSL1A2RUU4 121 aa2.42□□□□□ -2.02
HMGB3P8-201ENST00000449709 LECT2O14960 151 aa2.42□□□□□ -2.02
HMGB3P8-201ENST00000449709 PSPHP1O15172 72 aa2.42□□□□□ -2.02
HMGB3P8-201ENST00000449709 IGLV1-44P01699 117 aa2.42□□□□□ -2.02
HMGB3P8-201ENST00000449709 IGKV4-1P06312 121 aa2.42□□□□□ -2.02
HMGB3P8-201ENST00000449709 LMO4P61968 165 aa2.42□□□□□ -2.02
HMGB3P8-201ENST00000449709 NDPQ00604 133 aa2.42□□□□□ -2.02
HMGB3P8-201ENST00000449709 MOBPQ13875 183 aa2.42□□□□□ -2.02
HMGB3P8-201ENST00000449709 Q8N814 137 aa2.42□□□□□ -2.02
HMGB3P8-201ENST00000449709 CHCHD7Q9BUK0 85 aa2.42□□□□□ -2.02
HMGB3P8-201ENST00000449709 PLXNB1O43157 2135 aa2.42□□□□□ -2.02
HMGB3P8-201ENST00000449709 PDE4DIPQ5VU43 2346 aa2.41□□□□□ -2.02
HMGB3P8-201ENST00000449709 IGHV3OR16-12A0A075B7B8 117 aa2.41□□□□□ -2.02
HMGB3P8-201ENST00000449709 IGHV3OR16-9A0A0B4J2B5 98 aa2.41□□□□□ -2.02
HMGB3P8-201ENST00000449709 TRBV6-4A0A1B0GX49 114 aa2.41□□□□□ -2.02
HMGB3P8-201ENST00000449709 MGPP08493 103 aa2.41□□□□□ -2.02
HMGB3P8-201ENST00000449709 CNBPP62633 177 aaKnown RBP2.41□□□□□ -2.02
HMGB3P8-201ENST00000449709 PRR3P79522 188 aaKnown RBP2.41□□□□□ -2.02
HMGB3P8-201ENST00000449709 NTM-AS1Q6ZSK4 140 aa2.41□□□□□ -2.02
HMGB3P8-201ENST00000449709 Q6ZTI0 123 aa2.41□□□□□ -2.02
HMGB3P8-201ENST00000449709 CDKN2A-AS1Q9UH64 79 aa2.41□□□□□ -2.02
HMGB3P8-201ENST00000449709 CELA1Q9UNI1 258 aa2.41□□□□□ -2.02
HMGB3P8-201ENST00000449709 SDK2Q58EX2 2172 aa2.41□□□□□ -2.02
HMGB3P8-201ENST00000449709 F5P12259 2224 aa2.41□□□□□ -2.02
HMGB3P8-201ENST00000449709 M0R2N4 97 aa2.4□□□□□ -2.03
HMGB3P8-201ENST00000449709 IGLV1-47P01700 117 aa2.4□□□□□ -2.03
HMGB3P8-201ENST00000449709 MP68P56378 58 aa2.4□□□□□ -2.03
HMGB3P8-201ENST00000449709 FBXL19-AS1Q494R0 122 aa2.4□□□□□ -2.03
HMGB3P8-201ENST00000449709 C9orf116Q5BN46 136 aaPredicted RBP2.4□□□□□ -2.03
HMGB3P8-201ENST00000449709 NPBQ8NG41 125 aa2.4□□□□□ -2.03
HMGB3P8-201ENST00000449709 HIGD2AQ9BW72 106 aa2.4□□□□□ -2.03
HMGB3P8-201ENST00000449709 ZNRD1Q9P1U0 126 aa2.4□□□□□ -2.03
HMGB3P8-201ENST00000449709 IGLV7-46A0A075B6I9 117 aa2.39□□□□□ -2.03
HMGB3P8-201ENST00000449709 IGHV1OR15-1A0A075B7D0 117 aa2.39□□□□□ -2.03
HMGB3P8-201ENST00000449709 IGHV3-21A0A0B4J1V1 117 aa2.39□□□□□ -2.03
HMGB3P8-201ENST00000449709 IGHV3-16A0A0C4DH30 117 aa2.39□□□□□ -2.03
HMGB3P8-201ENST00000449709 A0A1B0GW54 56 aa2.39□□□□□ -2.03
HMGB3P8-201ENST00000449709 RPL37AP8A6NKH3 93 aa2.39□□□□□ -2.03
HMGB3P8-201ENST00000449709 CHKB-CPT1BH3BT56 60 aa2.39□□□□□ -2.03
HMGB3P8-201ENST00000449709 NDUFB1O75438 58 aa2.39□□□□□ -2.03
HMGB3P8-201ENST00000449709 CCL18P55774 89 aa2.39□□□□□ -2.03
HMGB3P8-201ENST00000449709 LINC00612Q8N6U2 182 aa2.39□□□□□ -2.03
HMGB3P8-201ENST00000449709 Q8NBF4 154 aa2.39□□□□□ -2.03
HMGB3P8-201ENST00000449709 SND1-IT1Q9HBX3 110 aa2.39□□□□□ -2.03
HMGB3P8-201ENST00000449709 LINC01558Q9Y6Z2 57 aa2.39□□□□□ -2.03
HMGB3P8-201ENST00000449709 COL6A3P12111 3177 aa2.39□□□□□ -2.03
HMGB3P8-201ENST00000449709 CACNA1GO43497 2377 aa2.38□□□□□ -2.03
HMGB3P8-201ENST00000449709 IGLV4-60A0A075B6I1 120 aa2.38□□□□□ -2.03
HMGB3P8-201ENST00000449709 IGHV3-49A0A0A0MS15 119 aa2.38□□□□□ -2.03
HMGB3P8-201ENST00000449709 RTL8CO15255 209 aa2.38□□□□□ -2.03
HMGB3P8-201ENST00000449709 PRM2P04554 102 aa2.38□□□□□ -2.03
HMGB3P8-201ENST00000449709 S100A4P26447 101 aaKnown RBP2.38□□□□□ -2.03
HMGB3P8-201ENST00000449709 FAM74A4Q5TZK3 123 aa2.38□□□□□ -2.03
HMGB3P8-201ENST00000449709 MUC7Q8TAX7 377 aa2.38□□□□□ -2.03
HMGB3P8-201ENST00000449709 KCNQ1DNQ9H478 68 aa2.38□□□□□ -2.03
HMGB3P8-201ENST00000449709 UTRNP46939 3433 aa2.38□□□□□ -2.03
HMGB3P8-201ENST00000449709 CEP350Q5VT06 3117 aa2.38□□□□□ -2.03
HMGB3P8-201ENST00000449709 SZT2Q5T011 3432 aa2.37□□□□□ -2.03
HMGB3P8-201ENST00000449709 H3BPC8 53 aa2.37□□□□□ -2.03
HMGB3P8-201ENST00000449709 IGHV1-46P01743 117 aa2.37□□□□□ -2.03
HMGB3P8-201ENST00000449709 IGHV3-53P01767 116 aa2.37□□□□□ -2.03
HMGB3P8-201ENST00000449709 PRB4P10163 310 aaPredicted RBP2.37□□□□□ -2.03
HMGB3P8-201ENST00000449709 IGHV1-2P23083 117 aa2.37□□□□□ -2.03
HMGB3P8-201ENST00000449709 COX6A2Q02221 97 aa2.37□□□□□ -2.03
HMGB3P8-201ENST00000449709 REG3GQ6UW15 175 aa2.37□□□□□ -2.03
HMGB3P8-201ENST00000449709 LINC00575Q6W349 94 aa2.37□□□□□ -2.03
HMGB3P8-201ENST00000449709 KRTAP1-5Q9BYS1 174 aa2.37□□□□□ -2.03
HMGB3P8-201ENST00000449709 KAAG1Q9UBP8 84 aa2.37□□□□□ -2.03
HMGB3P8-201ENST00000449709 S4R3C0 116 aa2.37□□□□□ -2.03
HMGB3P8-201ENST00000449709 MED13Q9UHV7 2174 aa2.36□□□□□ -2.03
HMGB3P8-201ENST00000449709 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.36□□□□□ -2.03
HMGB3P8-201ENST00000449709 IGHV3-73A0A0B4J1V6 119 aa2.36□□□□□ -2.03
HMGB3P8-201ENST00000449709 IGHV3-66A0A0C4DH42 116 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms