RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 DGAT2L7PQ6IED9 249 aa7.58□□□□□ -1.2
LINC00342-202ENST00000448494 PHF5AQ7RTV0 110 aaKnown RBP7.58□□□□□ -1.2
LINC00342-202ENST00000448494 CEP295Q9C0D2 2601 aa7.58□□□□□ -1.2
LINC00342-202ENST00000448494 SYCNQ0VAF6 134 aa7.57□□□□□ -1.2
LINC00342-202ENST00000448494 C9orf106Q8NAJ2 232 aa7.57□□□□□ -1.2
LINC00342-202ENST00000448494 IGF2RP11717 2491 aa7.57□□□□□ -1.2
LINC00342-202ENST00000448494 ZZEF1O43149 2961 aa7.57□□□□□ -1.2
LINC00342-202ENST00000448494 PSPHP1O15172 72 aa7.57□□□□□ -1.2
LINC00342-202ENST00000448494 Q8N814 137 aa7.57□□□□□ -1.2
LINC00342-202ENST00000448494 Q8NA96 180 aa7.57□□□□□ -1.2
LINC00342-202ENST00000448494 TRBV10-1A0A0K0K1A3 114 aa7.56□□□□□ -1.2
LINC00342-202ENST00000448494 K7EQG2 157 aa7.56□□□□□ -1.2
LINC00342-202ENST00000448494 UBE2L6O14933 153 aa7.56□□□□□ -1.2
LINC00342-202ENST00000448494 PDE6GP18545 87 aa7.56□□□□□ -1.2
LINC00342-202ENST00000448494 DEFB124Q8NES8 71 aa7.56□□□□□ -1.2
LINC00342-202ENST00000448494 LINC00467Q9BRT7 94 aa7.56□□□□□ -1.2
LINC00342-202ENST00000448494 MED13Q9UHV7 2174 aa7.56□□□□□ -1.2
LINC00342-202ENST00000448494 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.55□□□□□ -1.2
LINC00342-202ENST00000448494 DPM3Q9P2X0 92 aa7.55□□□□□ -1.2
LINC00342-202ENST00000448494 ZNF73O43830 326 aaPredicted RBP7.55□□□□□ -1.2
LINC00342-202ENST00000448494 ANKRD11Q6UB99 2663 aaPredicted RBP7.55□□□□□ -1.2
LINC00342-202ENST00000448494 IGHV3OR16-12A0A075B7B8 117 aa7.54□□□□□ -1.2
LINC00342-202ENST00000448494 H3BS24 57 aa7.54□□□□□ -1.2
LINC00342-202ENST00000448494 PRB3Q04118 309 aaPredicted RBP7.54□□□□□ -1.2
LINC00342-202ENST00000448494 IGFL3Q6UXB1 125 aa7.54□□□□□ -1.2
LINC00342-202ENST00000448494 CCL17Q92583 94 aa7.54□□□□□ -1.2
LINC00342-202ENST00000448494 OCR1Q9BZK8 76 aa7.54□□□□□ -1.2
LINC00342-202ENST00000448494 C8orf87E5RJ46 101 aa7.54□□□□□ -1.2
LINC00342-202ENST00000448494 GNLYP22749 145 aa7.54□□□□□ -1.2
LINC00342-202ENST00000448494 UBE2AP49459 152 aa7.54□□□□□ -1.2
LINC00342-202ENST00000448494 CCL18P55774 89 aa7.54□□□□□ -1.2
LINC00342-202ENST00000448494 DEFB1P60022 68 aa7.54□□□□□ -1.2
LINC00342-202ENST00000448494 C1orf64Q8NEQ6 169 aa7.54□□□□□ -1.2
LINC00342-202ENST00000448494 ASPMQ8IZT6 3477 aa7.53□□□□□ -1.2
LINC00342-202ENST00000448494 AKAP13Q12802 2813 aa7.53□□□□□ -1.2
LINC00342-202ENST00000448494 SDK1Q7Z5N4 2213 aa7.53□□□□□ -1.2
LINC00342-202ENST00000448494 IGHV7-81A0A0B4J1V7 117 aa7.53□□□□□ -1.2
LINC00342-202ENST00000448494 PATE3B3GLJ2 98 aa7.53□□□□□ -1.2
LINC00342-202ENST00000448494 C9orf66Q5T8R8 295 aa7.53□□□□□ -1.2
LINC00342-202ENST00000448494 ATP11AUNQ6ZP68 121 aa7.53□□□□□ -1.2
LINC00342-202ENST00000448494 TRBV6-4A0A1B0GX49 114 aa7.52□□□□□ -1.21
LINC00342-202ENST00000448494 GRNP28799 593 aaKnown RBP7.52□□□□□ -1.21
LINC00342-202ENST00000448494 LINC00269Q8N2A0 174 aa7.52□□□□□ -1.21
LINC00342-202ENST00000448494 GCN1Q92616 2671 aaKnown RBP7.52□□□□□ -1.21
LINC00342-202ENST00000448494 WDFY3Q8IZQ1 3526 aa7.51□□□□□ -1.21
LINC00342-202ENST00000448494 NTM-AS1Q6ZSK4 140 aa7.51□□□□□ -1.21
LINC00342-202ENST00000448494 SETXQ7Z333 2677 aaKnown RBP7.51□□□□□ -1.21
LINC00342-202ENST00000448494 ODF3BA8MYP8 253 aa7.51□□□□□ -1.21
LINC00342-202ENST00000448494 ZFHX3Q15911 3703 aa7.5□□□□□ -1.21
LINC00342-202ENST00000448494 K7EMT4 169 aa7.5□□□□□ -1.21
LINC00342-202ENST00000448494 LINC00158P58513 81 aa7.5□□□□□ -1.21
LINC00342-202ENST00000448494 MINOS1Q5TGZ0 78 aa7.5□□□□□ -1.21
LINC00342-202ENST00000448494 LINC01356Q8N9X3 169 aa7.5□□□□□ -1.21
LINC00342-202ENST00000448494 CACNA1EQ15878 2313 aa7.5□□□□□ -1.21
LINC00342-202ENST00000448494 LRCOL1A6NCL2 159 aa7.49□□□□□ -1.21
LINC00342-202ENST00000448494 A6NN06 94 aa7.49□□□□□ -1.21
LINC00342-202ENST00000448494 A8MUN3 132 aa7.49□□□□□ -1.21
LINC00342-202ENST00000448494 Q5VV11 94 aa7.49□□□□□ -1.21
LINC00342-202ENST00000448494 CD164L2Q6UWJ8 174 aa7.49□□□□□ -1.21
LINC00342-202ENST00000448494 ZNF843Q8N446 348 aa7.49□□□□□ -1.21
LINC00342-202ENST00000448494 C11orf44Q8N8P7 122 aa7.49□□□□□ -1.21
LINC00342-202ENST00000448494 HIGD2AQ9BW72 106 aa7.49□□□□□ -1.21
LINC00342-202ENST00000448494 ITPR1Q14643 2758 aa7.49□□□□□ -1.21
LINC00342-202ENST00000448494 CYSRT1A8MQ03 144 aa7.48□□□□□ -1.21
LINC00342-202ENST00000448494 C16orf90A8MZG2 172 aa7.48□□□□□ -1.21
LINC00342-202ENST00000448494 PSCAO43653 123 aa7.48□□□□□ -1.21
LINC00342-202ENST00000448494 CYP4F30PQ9H0H9 118 aa7.48□□□□□ -1.21
LINC00342-202ENST00000448494 ASH1LQ9NR48 2969 aaKnown RBP7.48□□□□□ -1.21
LINC00342-202ENST00000448494 H3BQ85 93 aa7.48□□□□□ -1.21
LINC00342-202ENST00000448494 C7orf65Q6ZTY9 151 aa7.48□□□□□ -1.21
LINC00342-202ENST00000448494 LCA10Q71F78 164 aa7.48□□□□□ -1.21
LINC00342-202ENST00000448494 COX7B2Q8TF08 81 aa7.48□□□□□ -1.21
LINC00342-202ENST00000448494 PTPRQQ9UMZ3 2332 aa7.48□□□□□ -1.21
LINC00342-202ENST00000448494 DMXL2Q8TDJ6 3036 aa7.48□□□□□ -1.21
LINC00342-202ENST00000448494 DSPP15924 2871 aaKnown RBP7.48□□□□□ -1.21
LINC00342-202ENST00000448494 K7EQD1 137 aa7.47□□□□□ -1.21
LINC00342-202ENST00000448494 M0R2N4 97 aa7.47□□□□□ -1.21
LINC00342-202ENST00000448494 ECSCRQ19T08 205 aa7.47□□□□□ -1.21
LINC00342-202ENST00000448494 DIRC1Q969H9 104 aa7.47□□□□□ -1.21
LINC00342-202ENST00000448494 LAMA1P25391 3075 aa7.47□□□□□ -1.21
LINC00342-202ENST00000448494 IGSF10Q6WRI0 2623 aa7.47□□□□□ -1.21
LINC00342-202ENST00000448494 TRBV6-8A0A0A6YYG3 113 aa7.47□□□□□ -1.21
LINC00342-202ENST00000448494 A0A096LNT2 108 aa7.46□□□□□ -1.21
LINC00342-202ENST00000448494 LCE6AA0A183 80 aa7.46□□□□□ -1.21
LINC00342-202ENST00000448494 A8MU10 97 aa7.46□□□□□ -1.21
LINC00342-202ENST00000448494 AHCTF1Q8WYP5 2266 aa7.46□□□□□ -1.22
LINC00342-202ENST00000448494 NDUFA4O00483 81 aa7.46□□□□□ -1.22
LINC00342-202ENST00000448494 LY6HO94772 140 aa7.46□□□□□ -1.22
LINC00342-202ENST00000448494 Q8N9W7 124 aa7.46□□□□□ -1.22
LINC00342-202ENST00000448494 RNASE1P07998 156 aaKnown RBP7.45□□□□□ -1.22
LINC00342-202ENST00000448494 PLA2G2AP14555 144 aa7.45□□□□□ -1.22
LINC00342-202ENST00000448494 PROK1P58294 105 aa7.45□□□□□ -1.22
LINC00342-202ENST00000448494 PRB1P04280 392 aa7.45□□□□□ -1.22
LINC00342-202ENST00000448494 IGHV3-73A0A0B4J1V6 119 aa7.44□□□□□ -1.22
LINC00342-202ENST00000448494 ATP6V0E1O15342 81 aa7.44□□□□□ -1.22
LINC00342-202ENST00000448494 C22orf34Q6ZV56 151 aa7.44□□□□□ -1.22
LINC00342-202ENST00000448494 SCXQ7RTU7 201 aa7.44□□□□□ -1.22
LINC00342-202ENST00000448494 HCG22E2RYF7 251 aa7.43□□□□□ -1.22
LINC00342-202ENST00000448494 CHKB-CPT1BH3BT56 60 aa7.43□□□□□ -1.22
LINC00342-202ENST00000448494 IGHV4-31P0DP07 118 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms