RNA–Protein interactions for RNA: ENST00000445329.5

TRIM6-205, Transcript of tripartite motif containing 6, human

TSL 1 (best) BASIC

Gene TRIM6, Length 2,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM6-205	ENST00000445329	ZNF706	Q9Y5V0	76 aa	Predicted RBP	4.83	□□□□□ -1.64
TRIM6-205	ENST00000445329	KIF25-AS1	Q9Y6Z4	181 aa		4.83	□□□□□ -1.64
TRIM6-205	ENST00000445329	PRB2	P02812	416 aa	Predicted RBP	4.82	□□□□□ -1.64
TRIM6-205	ENST00000445329	LCE2D	Q5TA82	110 aa	Predicted RBP	4.82	□□□□□ -1.64
TRIM6-205	ENST00000445329	IGFL4	Q6B9Z1	124 aa		4.82	□□□□□ -1.64
TRIM6-205	ENST00000445329	TENM4	Q6N022	2769 aa		4.82	□□□□□ -1.64
TRIM6-205	ENST00000445329		H3BRN7	92 aa		4.82	□□□□□ -1.64
TRIM6-205	ENST00000445329	SLPI	P03973	132 aa		4.82	□□□□□ -1.64
TRIM6-205	ENST00000445329	C9orf47	Q6ZRZ4	202 aa		4.82	□□□□□ -1.64
TRIM6-205	ENST00000445329	LINC00337	Q8N6G1	96 aa		4.82	□□□□□ -1.64
TRIM6-205	ENST00000445329	C11orf21	Q9P2W6	132 aa		4.82	□□□□□ -1.64
TRIM6-205	ENST00000445329	HRNR	Q86YZ3	2850 aa	Predicted RBP	4.81	□□□□□ -1.64
TRIM6-205	ENST00000445329		K7EQG2	157 aa		4.81	□□□□□ -1.64
TRIM6-205	ENST00000445329	LECT2	O14960	151 aa		4.81	□□□□□ -1.64
TRIM6-205	ENST00000445329	LINC01547	P58512	204 aa	Predicted RBP	4.81	□□□□□ -1.64
TRIM6-205	ENST00000445329	ORMDL1	Q9P0S3	153 aa		4.81	□□□□□ -1.64
TRIM6-205	ENST00000445329	NANOS2	P60321	138 aa	Known RBP	4.81	□□□□□ -1.64
TRIM6-205	ENST00000445329	RPL11	P62913	178 aa	Known RBP	4.81	□□□□□ -1.64
TRIM6-205	ENST00000445329	USP9X	Q93008	2570 aa	Predicted RBP	4.81	□□□□□ -1.64
TRIM6-205	ENST00000445329	MYO18B	Q8IUG5	2567 aa		4.81	□□□□□ -1.64
TRIM6-205	ENST00000445329	ERC2-IT1	O76042	136 aa		4.8	□□□□□ -1.64
TRIM6-205	ENST00000445329	PPP1R17	O96001	155 aa		4.8	□□□□□ -1.64
TRIM6-205	ENST00000445329	IGHV1-69	P01742	117 aa		4.8	□□□□□ -1.64
TRIM6-205	ENST00000445329	PDE6H	Q13956	83 aa		4.8	□□□□□ -1.64
TRIM6-205	ENST00000445329		Q6ZTI0	123 aa		4.8	□□□□□ -1.64
TRIM6-205	ENST00000445329	PRAC1	Q96KF2	57 aa		4.8	□□□□□ -1.64
TRIM6-205	ENST00000445329	HIGD2A	Q9BW72	106 aa		4.8	□□□□□ -1.64
TRIM6-205	ENST00000445329	FAM208B	Q5VWN6	2430 aa		4.8	□□□□□ -1.64
TRIM6-205	ENST00000445329	SPTBN1	Q01082	2364 aa	Known RBP	4.8	□□□□□ -1.64
TRIM6-205	ENST00000445329		A6NED7	52 aa		4.8	□□□□□ -1.64
TRIM6-205	ENST00000445329	LY6H	O94772	140 aa		4.8	□□□□□ -1.64
TRIM6-205	ENST00000445329	CXCL6	P80162	114 aa		4.8	□□□□□ -1.64
TRIM6-205	ENST00000445329	MUC4	Q99102	2169 aa		4.8	□□□□□ -1.64
TRIM6-205	ENST00000445329	IGHV4-4	A0A075B6R2	117 aa		4.8	□□□□□ -1.64
TRIM6-205	ENST00000445329	PSCA	O43653	123 aa		4.8	□□□□□ -1.64
TRIM6-205	ENST00000445329	BPY2	O14599	106 aa		4.79	□□□□□ -1.64
TRIM6-205	ENST00000445329	TACC2	O95359	2948 aa		4.79	□□□□□ -1.64
TRIM6-205	ENST00000445329	IGKV2-29	A2NJV5	120 aa	Predicted RBP	4.79	□□□□□ -1.64
TRIM6-205	ENST00000445329	GNRH2	O43555	120 aa		4.79	□□□□□ -1.64
TRIM6-205	ENST00000445329	CSMD2	Q7Z408	3487 aa		4.78	□□□□□ -1.64
TRIM6-205	ENST00000445329	TRBV10-1	A0A0K0K1A3	114 aa		4.78	□□□□□ -1.64
TRIM6-205	ENST00000445329	PRR15L	Q9BU68	103 aa		4.78	□□□□□ -1.64
TRIM6-205	ENST00000445329	CELSR2	Q9HCU4	2923 aa		4.78	□□□□□ -1.64
TRIM6-205	ENST00000445329	JMJD7-PLA2G4B	H0Y9G9	81 aa		4.78	□□□□□ -1.64
TRIM6-205	ENST00000445329	CRP	P02741	224 aa		4.78	□□□□□ -1.64
TRIM6-205	ENST00000445329	IGHV1-18	A0A0C4DH31	117 aa		4.77	□□□□□ -1.65
TRIM6-205	ENST00000445329	IGKV3-15	P01624	115 aa		4.77	□□□□□ -1.65
TRIM6-205	ENST00000445329	LINC01560	Q8TB33	94 aa		4.77	□□□□□ -1.65
TRIM6-205	ENST00000445329	ZNRD1	Q9P1U0	126 aa		4.77	□□□□□ -1.65
TRIM6-205	ENST00000445329	ICE1	Q9Y2F5	2266 aa		4.77	□□□□□ -1.65
TRIM6-205	ENST00000445329	C19orf84	I3L1E1	186 aa		4.77	□□□□□ -1.65
TRIM6-205	ENST00000445329	IGLV1-44	P01699	117 aa		4.77	□□□□□ -1.65
TRIM6-205	ENST00000445329	RPL36A	P83881	106 aa	Known RBP	4.77	□□□□□ -1.65
TRIM6-205	ENST00000445329	SCX	Q7RTU7	201 aa		4.77	□□□□□ -1.65
TRIM6-205	ENST00000445329	RPL36AL	Q969Q0	106 aa	Known RBP	4.77	□□□□□ -1.65
TRIM6-205	ENST00000445329	ZFAND3	Q9H8U3	227 aa		4.77	□□□□□ -1.65
TRIM6-205	ENST00000445329	ROS1	P08922	2347 aa		4.77	□□□□□ -1.65
TRIM6-205	ENST00000445329	ASH1L	Q9NR48	2969 aa	Known RBP	4.77	□□□□□ -1.65
TRIM6-205	ENST00000445329	RPL27A	P46776	148 aa	Known RBP	4.77	□□□□□ -1.65
TRIM6-205	ENST00000445329	FBXL19-AS1	Q494R0	122 aa		4.77	□□□□□ -1.65
TRIM6-205	ENST00000445329	SPTAN1	Q13813	2472 aa	Known RBP	4.76	□□□□□ -1.65
TRIM6-205	ENST00000445329	IGLV4-3	A0A075B6K6	122 aa		4.76	□□□□□ -1.65
TRIM6-205	ENST00000445329	TRBV6-8	A0A0A6YYG3	113 aa		4.76	□□□□□ -1.65
TRIM6-205	ENST00000445329	MED14OS	P0DP75	135 aa		4.76	□□□□□ -1.65
TRIM6-205	ENST00000445329	POLR2K	P53803	58 aa	Known RBP	4.76	□□□□□ -1.65
TRIM6-205	ENST00000445329	PRR4	Q16378	134 aa		4.76	□□□□□ -1.65
TRIM6-205	ENST00000445329	TMEM167A	Q8TBQ9	72 aa		4.76	□□□□□ -1.65
TRIM6-205	ENST00000445329	DOPEY1	Q5JWR5	2465 aa		4.76	□□□□□ -1.65
TRIM6-205	ENST00000445329	KLLN	B2CW77	178 aa		4.76	□□□□□ -1.65
TRIM6-205	ENST00000445329	PRAC2	D3DTV9	90 aa		4.76	□□□□□ -1.65
TRIM6-205	ENST00000445329		H0Y9J4	135 aa		4.76	□□□□□ -1.65
TRIM6-205	ENST00000445329		H0YGX0	51 aa		4.76	□□□□□ -1.65
TRIM6-205	ENST00000445329	IGKV1-17	P01599	117 aa		4.76	□□□□□ -1.65
TRIM6-205	ENST00000445329	RNASE1	P07998	156 aa	Known RBP	4.76	□□□□□ -1.65
TRIM6-205	ENST00000445329	ANKHD1	Q8IWZ3	2542 aa	Known RBP	4.76	□□□□□ -1.65
TRIM6-205	ENST00000445329		F5H697	171 aa		4.75	□□□□□ -1.65
TRIM6-205	ENST00000445329	IGHV1-8	P0DP01	117 aa		4.75	□□□□□ -1.65
TRIM6-205	ENST00000445329	MOBP	Q13875	183 aa		4.75	□□□□□ -1.65
TRIM6-205	ENST00000445329	C19orf54	Q5BKX5	351 aa		4.75	□□□□□ -1.65
TRIM6-205	ENST00000445329	FBN2	P35556	2912 aa		4.75	□□□□□ -1.65
TRIM6-205	ENST00000445329	GCN1	Q92616	2671 aa	Known RBP	4.75	□□□□□ -1.65
TRIM6-205	ENST00000445329	HELZ2	Q9BYK8	2649 aa	Known RBP	4.75	□□□□□ -1.65
TRIM6-205	ENST00000445329	LRRK2	Q5S007	2527 aa		4.75	□□□□□ -1.65
TRIM6-205	ENST00000445329	CSMD1	Q96PZ7	3565 aa		4.75	□□□□□ -1.65
TRIM6-205	ENST00000445329	NDUFA1	O15239	70 aa		4.75	□□□□□ -1.65
TRIM6-205	ENST00000445329	C6orf99	Q4VX62	202 aa		4.75	□□□□□ -1.65
TRIM6-205	ENST00000445329	SMIM11B	Q8TCY0	68 aa		4.75	□□□□□ -1.65
TRIM6-205	ENST00000445329	ABCA4	P78363	2273 aa		4.75	□□□□□ -1.65
TRIM6-205	ENST00000445329	PRM2	P04554	102 aa		4.74	□□□□□ -1.65
TRIM6-205	ENST00000445329	ZNRF1	Q8ND25	227 aa		4.74	□□□□□ -1.65
TRIM6-205	ENST00000445329	CENPE	Q02224	2701 aa		4.74	□□□□□ -1.65
TRIM6-205	ENST00000445329	PLA2G2A	P14555	144 aa		4.74	□□□□□ -1.65
TRIM6-205	ENST00000445329	BSPH1	Q075Z2	132 aa		4.74	□□□□□ -1.65
TRIM6-205	ENST00000445329	C9orf116	Q5BN46	136 aa	Predicted RBP	4.74	□□□□□ -1.65
TRIM6-205	ENST00000445329	C18orf65	Q6ZTR6	163 aa		4.74	□□□□□ -1.65
TRIM6-205	ENST00000445329	LINC00574	Q9H8X3	128 aa		4.74	□□□□□ -1.65
TRIM6-205	ENST00000445329	CDC42SE1	Q9NRR8	79 aa		4.74	□□□□□ -1.65
TRIM6-205	ENST00000445329	PKDREJ	Q9NTG1	2253 aa		4.73	□□□□□ -1.65
TRIM6-205	ENST00000445329	SUMO4	Q6EEV6	95 aa		4.73	□□□□□ -1.65
TRIM6-205	ENST00000445329	LIMD2	Q9BT23	127 aa		4.73	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms