RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 G3V4G9 280 aa17.95■□□□□ 0.46
CPNE1-216ENST00000437340 SPART-AS1P0CW21 52 aa17.95■□□□□ 0.46
CPNE1-216ENST00000437340 DNAH3Q8TD57 4116 aa17.95■□□□□ 0.46
CPNE1-216ENST00000437340 NBEAL2Q6ZNJ1 2754 aa17.94■□□□□ 0.46
CPNE1-216ENST00000437340 ATP5G1P05496 136 aa17.94■□□□□ 0.46
CPNE1-216ENST00000437340 SPCS1Q9Y6A9 102 aa17.93■□□□□ 0.46
CPNE1-216ENST00000437340 CELA1Q9UNI1 258 aa17.91■□□□□ 0.46
CPNE1-216ENST00000437340 SMIM1B2RUZ4 78 aa17.91■□□□□ 0.46
CPNE1-216ENST00000437340 NDUFA1O15239 70 aa17.91■□□□□ 0.46
CPNE1-216ENST00000437340 TEX48A0A1B0GUV7 120 aa17.9■□□□□ 0.46
CPNE1-216ENST00000437340 LITAFQ99732 161 aa17.9■□□□□ 0.46
CPNE1-216ENST00000437340 IGLV4-60A0A075B6I1 120 aa17.89■□□□□ 0.45
CPNE1-216ENST00000437340 RPL24P83731 157 aaKnown RBP17.89■□□□□ 0.45
CPNE1-216ENST00000437340 A0A1B0GUV1 79 aa17.89■□□□□ 0.45
CPNE1-216ENST00000437340 F5H768 121 aa17.89■□□□□ 0.45
CPNE1-216ENST00000437340 TIMM17BO60830 172 aa17.89■□□□□ 0.45
CPNE1-216ENST00000437340 SPANXDQ9BXN6 97 aa17.88■□□□□ 0.45
CPNE1-216ENST00000437340 SPANXCQ9NY87 97 aa17.88■□□□□ 0.45
CPNE1-216ENST00000437340 TRAV26-1A0A087WT03 109 aa17.87■□□□□ 0.45
CPNE1-216ENST00000437340 MUSTN1Q8IVN3 82 aa17.86■□□□□ 0.45
CPNE1-216ENST00000437340 CFC1BP0CG36 223 aa17.86■□□□□ 0.45
CPNE1-216ENST00000437340 CFC1P0CG37 223 aa17.86■□□□□ 0.45
CPNE1-216ENST00000437340 APOMO95445 188 aa17.85■□□□□ 0.45
CPNE1-216ENST00000437340 PGPEP1Q9NXJ5 209 aa17.85■□□□□ 0.45
CPNE1-216ENST00000437340 A4D1N5 150 aa17.84■□□□□ 0.45
CPNE1-216ENST00000437340 MIAQ16674 131 aa17.83■□□□□ 0.44
CPNE1-216ENST00000437340 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.82■□□□□ 0.44
CPNE1-216ENST00000437340 TMEM262E9PQX1 116 aa17.81■□□□□ 0.44
CPNE1-216ENST00000437340 ADAMTSL4-AS1Q5T5F5 129 aa17.81■□□□□ 0.44
CPNE1-216ENST00000437340 SH2D6Q7Z4S9 175 aa17.81■□□□□ 0.44
CPNE1-216ENST00000437340 A0A096LPF7 62 aa17.81■□□□□ 0.44
CPNE1-216ENST00000437340 A0A0B4J2C4 111 aa17.81■□□□□ 0.44
CPNE1-216ENST00000437340 RBX1P62877 108 aa17.81■□□□□ 0.44
CPNE1-216ENST00000437340 CIRBPQ14011 172 aaKnown RBP17.81■□□□□ 0.44
CPNE1-216ENST00000437340 Q9H8V8 135 aa17.81■□□□□ 0.44
CPNE1-216ENST00000437340 PRO1854Q9UHT4 67 aa17.81■□□□□ 0.44
CPNE1-216ENST00000437340 TSPAN13O95857 204 aa17.8■□□□□ 0.44
CPNE1-216ENST00000437340 MRPL23Q16540 153 aaKnown RBP17.8■□□□□ 0.44
CPNE1-216ENST00000437340 IGHV3OR16-9A0A0B4J2B5 98 aa17.79■□□□□ 0.44
CPNE1-216ENST00000437340 IFITM1P13164 125 aa17.79■□□□□ 0.44
CPNE1-216ENST00000437340 IGKV3OR2-268A0A0C4DH90 116 aa17.79■□□□□ 0.44
CPNE1-216ENST00000437340 HERV-K104P63124 156 aa17.79■□□□□ 0.44
CPNE1-216ENST00000437340 ZNF625Q96I27 306 aaPredicted RBP17.79■□□□□ 0.44
CPNE1-216ENST00000437340 NOTCH1P46531 2555 aa17.78■□□□□ 0.44
CPNE1-216ENST00000437340 LINC00959A0A1B0GUT2 108 aa17.78■□□□□ 0.44
CPNE1-216ENST00000437340 PRSS2P07478 247 aa17.78■□□□□ 0.44
CPNE1-216ENST00000437340 ICOSQ9Y6W8 199 aa17.76■□□□□ 0.43
CPNE1-216ENST00000437340 A0A087WZ39 114 aa17.76■□□□□ 0.43
CPNE1-216ENST00000437340 HTN3P15516 51 aa17.74■□□□□ 0.43
CPNE1-216ENST00000437340 LYRM7Q5U5X0 104 aa17.74■□□□□ 0.43
CPNE1-216ENST00000437340 NBEAL1Q6ZS30 2694 aa17.74■□□□□ 0.43
CPNE1-216ENST00000437340 MGAM2Q2M2H8 2515 aa17.74■□□□□ 0.43
CPNE1-216ENST00000437340 SS18Q15532 418 aa17.74■□□□□ 0.43
CPNE1-216ENST00000437340 COX7B2Q8TF08 81 aa17.74■□□□□ 0.43
CPNE1-216ENST00000437340 C11orf68Q9H3H3 251 aaKnown RBP17.74■□□□□ 0.43
CPNE1-216ENST00000437340 EIF4EBP3O60516 100 aaPredicted RBP17.73■□□□□ 0.43
CPNE1-216ENST00000437340 PRB2P02812 416 aaPredicted RBP17.73■□□□□ 0.43
CPNE1-216ENST00000437340 RETNQ9HD89 108 aa17.72■□□□□ 0.43
CPNE1-216ENST00000437340 KPRPQ5T749 579 aaPredicted RBP17.71■□□□□ 0.43
CPNE1-216ENST00000437340 LELP1Q5T871 98 aa17.71■□□□□ 0.43
CPNE1-216ENST00000437340 COPS9Q8WXC6 57 aa17.71■□□□□ 0.43
CPNE1-216ENST00000437340 IGHV3-33P01772 117 aa17.71■□□□□ 0.43
CPNE1-216ENST00000437340 LINC01561Q8N1V8 128 aa17.69■□□□□ 0.42
CPNE1-216ENST00000437340 ERG28Q9UKR5 140 aa17.69■□□□□ 0.42
CPNE1-216ENST00000437340 H3BNG1 76 aa17.68■□□□□ 0.42
CPNE1-216ENST00000437340 LOC107984156A0A0G2JMH3 177 aa17.68■□□□□ 0.42
CPNE1-216ENST00000437340 ARL17AQ8IVW1 177 aa17.68■□□□□ 0.42
CPNE1-216ENST00000437340 MEIG1Q5JSS6 88 aa17.67■□□□□ 0.42
CPNE1-216ENST00000437340 PPDPFQ9H3Y8 114 aa17.67■□□□□ 0.42
CPNE1-216ENST00000437340 F8W1H4 67 aa17.66■□□□□ 0.42
CPNE1-216ENST00000437340 H3BMG7 143 aa17.66■□□□□ 0.42
CPNE1-216ENST00000437340 SFTA2Q6UW10 78 aa17.66■□□□□ 0.42
CPNE1-216ENST00000437340 C5orf38Q86SI9 138 aa17.66■□□□□ 0.42
CPNE1-216ENST00000437340 LINC00308Q8TCZ7 52 aa17.66■□□□□ 0.42
CPNE1-216ENST00000437340 KRTAP21-3Q3LHN1 58 aa17.65■□□□□ 0.42
CPNE1-216ENST00000437340 DAND5Q8N907 189 aa17.65■□□□□ 0.42
CPNE1-216ENST00000437340 DNHD1Q96M86 4753 aa17.65■□□□□ 0.42
CPNE1-216ENST00000437340 K7EIL1 84 aa17.64■□□□□ 0.41
CPNE1-216ENST00000437340 XCL1P47992 114 aa17.64■□□□□ 0.41
CPNE1-216ENST00000437340 NPC2P61916 151 aa17.64■□□□□ 0.41
CPNE1-216ENST00000437340 LINC00269Q8N2A0 174 aa17.64■□□□□ 0.41
CPNE1-216ENST00000437340 TOMM7Q9P0U1 55 aa17.64■□□□□ 0.41
CPNE1-216ENST00000437340 TRBV20-1A0A075B6N2 111 aa17.63■□□□□ 0.41
CPNE1-216ENST00000437340 ANGP03950 147 aaKnown RBP17.63■□□□□ 0.41
CPNE1-216ENST00000437340 OCIAD2Q56VL3 154 aa17.62■□□□□ 0.41
CPNE1-216ENST00000437340 REG3AQ06141 175 aa17.61■□□□□ 0.41
CPNE1-216ENST00000437340 CLPSL2Q6UWE3 100 aa17.61■□□□□ 0.41
CPNE1-216ENST00000437340 CD164L2Q6UWJ8 174 aa17.61■□□□□ 0.41
CPNE1-216ENST00000437340 PSMB2P49721 201 aa17.59■□□□□ 0.41
CPNE1-216ENST00000437340 LYPD5Q6UWN5 251 aa17.59■□□□□ 0.41
CPNE1-216ENST00000437340 A0A0U1RRA0 63 aa17.58■□□□□ 0.41
CPNE1-216ENST00000437340 SCGB1C2P0DMR2 95 aa17.58■□□□□ 0.41
CPNE1-216ENST00000437340 Q6ZTC4 211 aa17.58■□□□□ 0.41
CPNE1-216ENST00000437340 TRBV30A0A0K0K1B3 111 aa17.58■□□□□ 0.4
CPNE1-216ENST00000437340 Q1RN00 199 aa17.58■□□□□ 0.4
CPNE1-216ENST00000437340 Q8IZM0 81 aa17.58■□□□□ 0.4
CPNE1-216ENST00000437340 PRO0461Q9UI25 63 aa17.58■□□□□ 0.4
CPNE1-216ENST00000437340 Q8N3U1 123 aa17.57■□□□□ 0.4
CPNE1-216ENST00000437340 CHCHD10Q8WYQ3 142 aaPredicted RBP17.57■□□□□ 0.4
CPNE1-216ENST00000437340 A0A0J9YWU9 116 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms