RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 IFT172Q9UG01 1749 aa0.98□□□□□ -2.25
HMGB1P9-201ENST00000429856 UACAQ9BZF9 1416 aa0.98□□□□□ -2.25
HMGB1P9-201ENST00000429856 MYOM1P52179 1685 aa0.97□□□□□ -2.25
HMGB1P9-201ENST00000429856 ZC3H13Q5T200 1668 aaKnown RBP0.97□□□□□ -2.25
HMGB1P9-201ENST00000429856 ADCY10Q96PN6 1610 aa0.97□□□□□ -2.25
HMGB1P9-201ENST00000429856 GLI2P10070 1586 aa0.97□□□□□ -2.25
HMGB1P9-201ENST00000429856 BTAF1O14981 1849 aa0.97□□□□□ -2.25
HMGB1P9-201ENST00000429856 WNK3Q9BYP7 1800 aa0.97□□□□□ -2.25
HMGB1P9-201ENST00000429856 ROS1P08922 2347 aa0.97□□□□□ -2.25
HMGB1P9-201ENST00000429856 MYO18BQ8IUG5 2567 aa0.97□□□□□ -2.25
HMGB1P9-201ENST00000429856 TRAV1-2A0A0B4J238 106 aa0.97□□□□□ -2.25
HMGB1P9-201ENST00000429856 A0A0G2JND7 137 aa0.97□□□□□ -2.25
HMGB1P9-201ENST00000429856 IGLC7A0M8Q6 106 aa0.97□□□□□ -2.25
HMGB1P9-201ENST00000429856 M0R135 149 aa0.97□□□□□ -2.25
HMGB1P9-201ENST00000429856 NDUFC1O43677 76 aa0.97□□□□□ -2.25
HMGB1P9-201ENST00000429856 TRGV9Q99603 122 aa0.97□□□□□ -2.25
HMGB1P9-201ENST00000429856 C20orf78Q9BR46 151 aa0.97□□□□□ -2.25
HMGB1P9-201ENST00000429856 CACFD1Q9UGQ2 172 aa0.97□□□□□ -2.25
HMGB1P9-201ENST00000429856 FLNBO75369 2602 aaKnown RBP0.97□□□□□ -2.25
HMGB1P9-201ENST00000429856 HELZ2Q9BYK8 2649 aaKnown RBP0.97□□□□□ -2.25
HMGB1P9-201ENST00000429856 ABCA9Q8IUA7 1624 aa0.97□□□□□ -2.25
HMGB1P9-201ENST00000429856 MAP3K4Q9Y6R4 1608 aa0.97□□□□□ -2.25
HMGB1P9-201ENST00000429856 ABCA8O94911 1581 aa0.96□□□□□ -2.26
HMGB1P9-201ENST00000429856 ZFHX4Q86UP3 3567 aa0.96□□□□□ -2.26
HMGB1P9-201ENST00000429856 UNC80Q8N2C7 3258 aa0.96□□□□□ -2.26
HMGB1P9-201ENST00000429856 EPRSP07814 1512 aaKnown RBP0.96□□□□□ -2.26
HMGB1P9-201ENST00000429856 ABCC1P33527 1531 aa0.96□□□□□ -2.26
HMGB1P9-201ENST00000429856 ZMYM4Q5VZL5 1548 aa0.96□□□□□ -2.26
HMGB1P9-201ENST00000429856 SYCP2Q9BX26 1530 aa0.96□□□□□ -2.26
HMGB1P9-201ENST00000429856 A0A096LNT2 108 aa0.96□□□□□ -2.26
HMGB1P9-201ENST00000429856 LOC285095A0A1B0GVY8 99 aa0.96□□□□□ -2.26
HMGB1P9-201ENST00000429856 F8VRH5 84 aa0.96□□□□□ -2.26
HMGB1P9-201ENST00000429856 H7BZZ5 65 aa0.96□□□□□ -2.26
HMGB1P9-201ENST00000429856 GYPAP02724 150 aa0.96□□□□□ -2.26
HMGB1P9-201ENST00000429856 COX6CP09669 75 aa0.96□□□□□ -2.26
HMGB1P9-201ENST00000429856 TRAPPC2P0DI81 140 aa0.96□□□□□ -2.26
HMGB1P9-201ENST00000429856 TRAPPC2BP0DI82 140 aa0.96□□□□□ -2.26
HMGB1P9-201ENST00000429856 ACYP2P14621 99 aa0.96□□□□□ -2.26
HMGB1P9-201ENST00000429856 TMEM170BQ5T4T1 132 aa0.96□□□□□ -2.26
HMGB1P9-201ENST00000429856 BAGE3Q86Y29 109 aa0.96□□□□□ -2.26
HMGB1P9-201ENST00000429856 CCDC141Q6ZP82 1450 aa0.96□□□□□ -2.26
HMGB1P9-201ENST00000429856 PRXQ9BXM0 1461 aa0.96□□□□□ -2.26
HMGB1P9-201ENST00000429856 ARHGAP35Q9NRY4 1499 aa0.96□□□□□ -2.26
HMGB1P9-201ENST00000429856 MLH3Q9UHC1 1453 aa0.96□□□□□ -2.26
HMGB1P9-201ENST00000429856 CROCC2H7BZ55 1655 aa0.96□□□□□ -2.26
HMGB1P9-201ENST00000429856 SCN7AQ01118 1682 aa0.96□□□□□ -2.26
HMGB1P9-201ENST00000429856 GCC2Q8IWJ2 1684 aa0.96□□□□□ -2.26
HMGB1P9-201ENST00000429856 EIF2AK4Q9P2K8 1649 aaKnown RBP0.96□□□□□ -2.26
HMGB1P9-201ENST00000429856 HECTD1Q9ULT8 2610 aa0.96□□□□□ -2.26
HMGB1P9-201ENST00000429856 PPLO60437 1756 aa0.96□□□□□ -2.26
HMGB1P9-201ENST00000429856 TIAM1Q13009 1591 aa0.96□□□□□ -2.26
HMGB1P9-201ENST00000429856 MYH4Q9Y623 1939 aa0.95□□□□□ -2.26
HMGB1P9-201ENST00000429856 GCN1Q92616 2671 aaKnown RBP0.95□□□□□ -2.26
HMGB1P9-201ENST00000429856 ATP7AQ04656 1500 aa0.95□□□□□ -2.26
HMGB1P9-201ENST00000429856 CDK13Q14004 1512 aaKnown RBP0.95□□□□□ -2.26
HMGB1P9-201ENST00000429856 MAGI3Q5TCQ9 1506 aa0.95□□□□□ -2.26
HMGB1P9-201ENST00000429856 KDM5DQ9BY66 1539 aa0.95□□□□□ -2.26
HMGB1P9-201ENST00000429856 RANBP2P49792 3224 aaKnown RBP0.95□□□□□ -2.26
HMGB1P9-201ENST00000429856 FAM208BQ5VWN6 2430 aa0.95□□□□□ -2.26
HMGB1P9-201ENST00000429856 MROH2AA6NES4 1674 aa0.95□□□□□ -2.26
HMGB1P9-201ENST00000429856 MAGI2Q86UL8 1455 aa0.95□□□□□ -2.26
HMGB1P9-201ENST00000429856 C2CD3Q4AC94 2353 aa0.95□□□□□ -2.26
HMGB1P9-201ENST00000429856 LAMA4Q16363 1823 aa0.95□□□□□ -2.26
HMGB1P9-201ENST00000429856 CTXND1A0A1B0GTU2 59 aa0.95□□□□□ -2.26
HMGB1P9-201ENST00000429856 TMEM14DPA8MWL7 114 aa0.95□□□□□ -2.26
HMGB1P9-201ENST00000429856 SYS1-DBNDD2H3BUS1 97 aa0.95□□□□□ -2.26
HMGB1P9-201ENST00000429856 K7EP34 96 aa0.95□□□□□ -2.26
HMGB1P9-201ENST00000429856 ZNF137PP52743 207 aa0.95□□□□□ -2.26
HMGB1P9-201ENST00000429856 VMO1Q7Z5L0 202 aa0.95□□□□□ -2.26
HMGB1P9-201ENST00000429856 AMELXQ99217 191 aa0.95□□□□□ -2.26
HMGB1P9-201ENST00000429856 LINC01558Q9Y6Z2 57 aa0.95□□□□□ -2.26
HMGB1P9-201ENST00000429856 ARL2-SNX15V9GYD0 113 aa0.95□□□□□ -2.26
HMGB1P9-201ENST00000429856 MYO3AQ8NEV4 1616 aa0.95□□□□□ -2.26
HMGB1P9-201ENST00000429856 MADDQ8WXG6 1647 aa0.95□□□□□ -2.26
HMGB1P9-201ENST00000429856 CICQ96RK0 1608 aaPredicted RBP0.95□□□□□ -2.26
HMGB1P9-201ENST00000429856 EP400Q96L91 3159 aa0.95□□□□□ -2.26
HMGB1P9-201ENST00000429856 PLXNC1O60486 1568 aa0.95□□□□□ -2.26
HMGB1P9-201ENST00000429856 INO80Q9ULG1 1556 aaPredicted RBP0.95□□□□□ -2.26
HMGB1P9-201ENST00000429856 MAST1Q9Y2H9 1570 aa0.95□□□□□ -2.26
HMGB1P9-201ENST00000429856 CFAP47Q6ZTR5 3102 aa0.95□□□□□ -2.26
HMGB1P9-201ENST00000429856 POLR1AO95602 1720 aaPredicted RBP0.95□□□□□ -2.26
HMGB1P9-201ENST00000429856 RICTORQ6R327 1708 aa0.95□□□□□ -2.26
HMGB1P9-201ENST00000429856 SZT2Q5T011 3432 aa0.95□□□□□ -2.26
HMGB1P9-201ENST00000429856 CACNA1CQ13936 2221 aa0.95□□□□□ -2.26
HMGB1P9-201ENST00000429856 ABCC3O15438 1527 aa0.94□□□□□ -2.26
HMGB1P9-201ENST00000429856 CLTCQ00610 1675 aaKnown RBP0.94□□□□□ -2.26
HMGB1P9-201ENST00000429856 NCOA2Q15596 1464 aa0.94□□□□□ -2.26
HMGB1P9-201ENST00000429856 ABCA6Q8N139 1617 aa0.94□□□□□ -2.26
HMGB1P9-201ENST00000429856 RNF17Q9BXT8 1623 aaKnown RBP0.94□□□□□ -2.26
HMGB1P9-201ENST00000429856 PTPN23Q9H3S7 1636 aa0.94□□□□□ -2.26
HMGB1P9-201ENST00000429856 VCANP13611 3396 aa0.94□□□□□ -2.26
HMGB1P9-201ENST00000429856 NMBP08949 121 aa0.94□□□□□ -2.26
HMGB1P9-201ENST00000429856 RPL37P61927 97 aaKnown RBP0.94□□□□□ -2.26
HMGB1P9-201ENST00000429856 SPINK13Q1W4C9 94 aa0.94□□□□□ -2.26
HMGB1P9-201ENST00000429856 C6orf52Q5T4I8 152 aa0.94□□□□□ -2.26
HMGB1P9-201ENST00000429856 FAM223AQ8IWN6 122 aa0.94□□□□□ -2.26
HMGB1P9-201ENST00000429856 LCN9Q8WX39 176 aa0.94□□□□□ -2.26
HMGB1P9-201ENST00000429856 NXT2Q9NPJ8 142 aaKnown RBP0.94□□□□□ -2.26
HMGB1P9-201ENST00000429856 DIP2CQ9Y2E4 1556 aa0.94□□□□□ -2.26
HMGB1P9-201ENST00000429856 CEP170BQ9Y4F5 1589 aaPredicted RBP0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms