RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 SFT2D2O95562 160 aa-0.3□□□□□ -2.46
LINC00397-201ENST00000422074 AKAIN1P0CW23 69 aa-0.3□□□□□ -2.46
LINC00397-201ENST00000422074 SPRR2BP35325 72 aa-0.3□□□□□ -2.46
LINC00397-201ENST00000422074 C5orf38Q86SI9 138 aa-0.3□□□□□ -2.46
LINC00397-201ENST00000422074 FAIMQ9NVQ4 179 aa-0.3□□□□□ -2.46
LINC00397-201ENST00000422074 UQCR10Q9UDW1 63 aa-0.3□□□□□ -2.46
LINC00397-201ENST00000422074 ARHGEF12Q9NZN5 1544 aa-0.3□□□□□ -2.46
LINC00397-201ENST00000422074 MYOM1P52179 1685 aa-0.3□□□□□ -2.46
LINC00397-201ENST00000422074 SETD2Q9BYW2 2564 aaPredicted RBP-0.31□□□□□ -2.46
LINC00397-201ENST00000422074 K7EP13 123 aa-0.31□□□□□ -2.46
LINC00397-201ENST00000422074 MGPP08493 103 aa-0.31□□□□□ -2.46
LINC00397-201ENST00000422074 KRTAP19-8Q3LI54 63 aa-0.31□□□□□ -2.46
LINC00397-201ENST00000422074 FXYD6Q9H0Q3 95 aa-0.31□□□□□ -2.46
LINC00397-201ENST00000422074 SHROOM2Q13796 1616 aa-0.31□□□□□ -2.46
LINC00397-201ENST00000422074 PSME4Q14997 1843 aa-0.31□□□□□ -2.46
LINC00397-201ENST00000422074 TCHHQ07283 1943 aa-0.32□□□□□ -2.46
LINC00397-201ENST00000422074 PRKDCP78527 4128 aaKnown RBP-0.32□□□□□ -2.46
LINC00397-201ENST00000422074 KDM5AP29375 1690 aaKnown RBP-0.32□□□□□ -2.46
LINC00397-201ENST00000422074 COX6B1P14854 86 aa-0.32□□□□□ -2.46
LINC00397-201ENST00000422074 MRPL54Q6P161 138 aaKnown RBP-0.32□□□□□ -2.46
LINC00397-201ENST00000422074 MXRA5Q9NR99 2828 aa-0.32□□□□□ -2.46
LINC00397-201ENST00000422074 CUL7Q14999 1698 aa-0.33□□□□□ -2.46
LINC00397-201ENST00000422074 QRICH2Q9H0J4 1663 aa-0.33□□□□□ -2.46
LINC00397-201ENST00000422074 POLA1P09884 1462 aaPredicted RBP-0.33□□□□□ -2.46
LINC00397-201ENST00000422074 PCNX1Q96RV3 2341 aa-0.33□□□□□ -2.46
LINC00397-201ENST00000422074 LOC100130705A0A1B0GUX0 176 aa-0.33□□□□□ -2.46
LINC00397-201ENST00000422074 CHKB-CPT1BH3BT56 60 aa-0.33□□□□□ -2.46
LINC00397-201ENST00000422074 SPINK4O60575 86 aa-0.33□□□□□ -2.46
LINC00397-201ENST00000422074 KRTAP20-2Q3LI61 65 aa-0.33□□□□□ -2.46
LINC00397-201ENST00000422074 C9orf153Q5TBE3 101 aa-0.33□□□□□ -2.46
LINC00397-201ENST00000422074 ROBO1Q9Y6N7 1651 aa-0.33□□□□□ -2.46
LINC00397-201ENST00000422074 UBE2L5PA0A1B0GUS4 154 aa-0.34□□□□□ -2.46
LINC00397-201ENST00000422074 SNAPC5O75971 98 aa-0.34□□□□□ -2.46
LINC00397-201ENST00000422074 UBE2L3P68036 154 aaKnown RBP-0.34□□□□□ -2.46
LINC00397-201ENST00000422074 PP6455Q8WZ26 134 aa-0.34□□□□□ -2.46
LINC00397-201ENST00000422074 EPG5Q9HCE0 2579 aa-0.34□□□□□ -2.46
LINC00397-201ENST00000422074 HERC1Q15751 4861 aa-0.34□□□□□ -2.46
LINC00397-201ENST00000422074 A2ML1A8K2U0 1454 aa-0.35□□□□□ -2.46
LINC00397-201ENST00000422074 BTAF1O14981 1849 aa-0.35□□□□□ -2.47
LINC00397-201ENST00000422074 SPRR1BP22528 89 aa-0.35□□□□□ -2.47
LINC00397-201ENST00000422074 ATP5EP56381 51 aaPredicted RBP-0.35□□□□□ -2.47
LINC00397-201ENST00000422074 UBA52P62987 128 aaKnown RBP-0.35□□□□□ -2.47
LINC00397-201ENST00000422074 WHAMMP3Q1A5X7 153 aa-0.35□□□□□ -2.47
LINC00397-201ENST00000422074 NXT2Q9NPJ8 142 aaKnown RBP-0.35□□□□□ -2.47
LINC00397-201ENST00000422074 KMT2CQ8NEZ4 4911 aaKnown RBP-0.35□□□□□ -2.47
LINC00397-201ENST00000422074 SPG11Q96JI7 2443 aa-0.35□□□□□ -2.47
LINC00397-201ENST00000422074 ROCK2O75116 1388 aaKnown RBP-0.35□□□□□ -2.47
LINC00397-201ENST00000422074 SMG6Q86US8 1419 aaKnown RBP-0.36□□□□□ -2.47
LINC00397-201ENST00000422074 PKHD1P08F94 4074 aa-0.36□□□□□ -2.47
LINC00397-201ENST00000422074 OOSP1A8MZH6 123 aa-0.36□□□□□ -2.47
LINC00397-201ENST00000422074 M0R2T5 61 aa-0.36□□□□□ -2.47
LINC00397-201ENST00000422074 NALCNQ8IZF0 1738 aa-0.36□□□□□ -2.47
LINC00397-201ENST00000422074 FLGP20930 4061 aaPredicted RBP-0.36□□□□□ -2.47
LINC00397-201ENST00000422074 ARHGEF5Q12774 1597 aa-0.36□□□□□ -2.47
LINC00397-201ENST00000422074 NBASA2RRP1 2371 aa-0.37□□□□□ -2.47
LINC00397-201ENST00000422074 KNL1Q8NG31 2342 aa-0.37□□□□□ -2.47
LINC00397-201ENST00000422074 FAM24AA6NFZ4 105 aa-0.37□□□□□ -2.47
LINC00397-201ENST00000422074 GNG11P61952 73 aa-0.37□□□□□ -2.47
LINC00397-201ENST00000422074 DEFB123Q8N688 67 aa-0.37□□□□□ -2.47
LINC00397-201ENST00000422074 FDCSPQ8NFU4 85 aa-0.37□□□□□ -2.47
LINC00397-201ENST00000422074 TMEM263Q8WUH6 116 aaKnown RBP-0.37□□□□□ -2.47
LINC00397-201ENST00000422074 LINC00474Q9P2X8 69 aa-0.37□□□□□ -2.47
LINC00397-201ENST00000422074 FAT1Q14517 4588 aa-0.37□□□□□ -2.47
LINC00397-201ENST00000422074 MYOM2P54296 1465 aa-0.37□□□□□ -2.47
LINC00397-201ENST00000422074 GAPVD1Q14C86 1478 aa-0.37□□□□□ -2.47
LINC00397-201ENST00000422074 SVEP1Q4LDE5 3571 aa-0.37□□□□□ -2.47
LINC00397-201ENST00000422074 PCLOQ9Y6V0 5065 aa-0.38□□□□□ -2.47
LINC00397-201ENST00000422074 TRBV7-4A0A0J9YYF1 115 aa-0.38□□□□□ -2.47
LINC00397-201ENST00000422074 F6UZH7 168 aa-0.38□□□□□ -2.47
LINC00397-201ENST00000422074 SYS1-DBNDD2H3BUS1 97 aa-0.38□□□□□ -2.47
LINC00397-201ENST00000422074 IGLC1P0CG04 106 aa-0.38□□□□□ -2.47
LINC00397-201ENST00000422074 COX8AP10176 69 aa-0.38□□□□□ -2.47
LINC00397-201ENST00000422074 KLK9Q2XQG4 91 aa-0.38□□□□□ -2.47
LINC00397-201ENST00000422074 RPL13AP3Q6NVV1 102 aa-0.38□□□□□ -2.47
LINC00397-201ENST00000422074 FAM223AQ8IWN6 122 aa-0.38□□□□□ -2.47
LINC00397-201ENST00000422074 DEFB105AQ8NG35 78 aa-0.38□□□□□ -2.47
LINC00397-201ENST00000422074 ARL2-SNX15V9GYD0 113 aa-0.38□□□□□ -2.47
LINC00397-201ENST00000422074 IQSEC2Q5JU85 1478 aa-0.38□□□□□ -2.47
LINC00397-201ENST00000422074 TET3O43151 1660 aa-0.38□□□□□ -2.47
LINC00397-201ENST00000422074 NSD3Q9BZ95 1437 aa-0.38□□□□□ -2.47
LINC00397-201ENST00000422074 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.39□□□□□ -2.47
LINC00397-201ENST00000422074 C10orf113Q5VZT2 155 aa-0.39□□□□□ -2.47
LINC00397-201ENST00000422074 USMG5Q96IX5 58 aa-0.39□□□□□ -2.47
LINC00397-201ENST00000422074 MANBALQ9NQG1 85 aa-0.39□□□□□ -2.47
LINC00397-201ENST00000422074 EHBP1L1Q8N3D4 1523 aa-0.39□□□□□ -2.47
LINC00397-201ENST00000422074 ZFHX3Q15911 3703 aa-0.39□□□□□ -2.47
LINC00397-201ENST00000422074 MAGI1Q96QZ7 1491 aaPredicted RBP-0.4□□□□□ -2.47
LINC00397-201ENST00000422074 CDC42SE2Q9NRR3 84 aa-0.4□□□□□ -2.47
LINC00397-201ENST00000422074 TOP2BQ02880 1626 aa-0.4□□□□□ -2.47
LINC00397-201ENST00000422074 EIF4G3O43432 1585 aaKnown RBP-0.4□□□□□ -2.47
LINC00397-201ENST00000422074 SETBP1Q9Y6X0 1596 aa-0.4□□□□□ -2.47
LINC00397-201ENST00000422074 LAMA5O15230 3695 aa-0.41□□□□□ -2.47
LINC00397-201ENST00000422074 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.41□□□□□ -2.47
LINC00397-201ENST00000422074 SPRR2AP35326 72 aa-0.41□□□□□ -2.48
LINC00397-201ENST00000422074 KRTAP6-2Q3LI66 62 aa-0.41□□□□□ -2.48
LINC00397-201ENST00000422074 SVBPQ8N300 66 aa-0.41□□□□□ -2.48
LINC00397-201ENST00000422074 FAM167A-AS1Q96KT0 104 aa-0.41□□□□□ -2.48
LINC00397-201ENST00000422074 PRO1933Q9H354 126 aa-0.41□□□□□ -2.48
LINC00397-201ENST00000422074 SPTBN4Q9H254 2564 aa-0.41□□□□□ -2.48
LINC00397-201ENST00000422074 USP9YO00507 2555 aaPredicted RBP-0.42□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms