RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 MYOZ3Q8TDC0 251 aa2.06□□□□□ -2.08
LSM5-205ENST00000409952 LINC00312Q9Y6C7 94 aa2.06□□□□□ -2.08
LSM5-205ENST00000409952 CASKIN1Q8WXD9 1431 aa2.06□□□□□ -2.08
LSM5-205ENST00000409952 ATRQ13535 2644 aa2.05□□□□□ -2.08
LSM5-205ENST00000409952 WNK3Q9BYP7 1800 aa2.05□□□□□ -2.08
LSM5-205ENST00000409952 MCM3APO60318 1980 aa2.05□□□□□ -2.08
LSM5-205ENST00000409952 DMXL1Q9Y485 3027 aa2.05□□□□□ -2.08
LSM5-205ENST00000409952 ASPMQ8IZT6 3477 aa2.05□□□□□ -2.08
LSM5-205ENST00000409952 CACNA1HO95180 2353 aa2.05□□□□□ -2.08
LSM5-205ENST00000409952 C20orf197Q8N268 126 aa2.05□□□□□ -2.08
LSM5-205ENST00000409952 C5orf56Q8N8D9 126 aa2.05□□□□□ -2.08
LSM5-205ENST00000409952 LINC00474Q9P2X8 69 aa2.05□□□□□ -2.08
LSM5-205ENST00000409952 NSD3Q9BZ95 1437 aa2.05□□□□□ -2.08
LSM5-205ENST00000409952 LAMB1P07942 1786 aa2.05□□□□□ -2.08
LSM5-205ENST00000409952 PLXNA2O75051 1894 aa2.05□□□□□ -2.08
LSM5-205ENST00000409952 PTPRDP23468 1912 aa2.05□□□□□ -2.08
LSM5-205ENST00000409952 TNRC6AQ8NDV7 1962 aaKnown RBP2.05□□□□□ -2.08
LSM5-205ENST00000409952 CCDC168Q8NDH2 2452 aa2.05□□□□□ -2.08
LSM5-205ENST00000409952 JMJD1CQ15652 2540 aa2.05□□□□□ -2.08
LSM5-205ENST00000409952 CEP295Q9C0D2 2601 aa2.04□□□□□ -2.08
LSM5-205ENST00000409952 NBEAQ8NFP9 2946 aa2.04□□□□□ -2.08
LSM5-205ENST00000409952 MT-ATP8P03928 68 aa2.04□□□□□ -2.08
LSM5-205ENST00000409952 CCL3L1P16619 93 aa2.04□□□□□ -2.08
LSM5-205ENST00000409952 COL5A1P20908 1838 aaPredicted RBP2.04□□□□□ -2.08
LSM5-205ENST00000409952 MTORP42345 2549 aa2.04□□□□□ -2.08
LSM5-205ENST00000409952 CHD3Q12873 2000 aaKnown RBP2.04□□□□□ -2.08
LSM5-205ENST00000409952 COL4A6Q14031 1691 aa2.04□□□□□ -2.08
LSM5-205ENST00000409952 ARFGEF3Q5TH69 2177 aa2.04□□□□□ -2.08
LSM5-205ENST00000409952 PPP1R1CQ8WVI7 109 aa2.04□□□□□ -2.08
LSM5-205ENST00000409952 CDH23Q9H251 3354 aa2.04□□□□□ -2.08
LSM5-205ENST00000409952 Q9H521 79 aa2.04□□□□□ -2.08
LSM5-205ENST00000409952 STAB1Q9NY15 2570 aa2.04□□□□□ -2.08
LSM5-205ENST00000409952 TNRC6BQ9UPQ9 1833 aaKnown RBP2.04□□□□□ -2.08
LSM5-205ENST00000409952 FLNCQ14315 2725 aa2.04□□□□□ -2.08
LSM5-205ENST00000409952 EXPH5Q8NEV8 1989 aa2.03□□□□□ -2.08
LSM5-205ENST00000409952 C5P01031 1676 aa2.03□□□□□ -2.08
LSM5-205ENST00000409952 LMO7Q8WWI1 1683 aa2.03□□□□□ -2.08
LSM5-205ENST00000409952 ITPR1Q14643 2758 aa2.03□□□□□ -2.08
LSM5-205ENST00000409952 NBEAL1Q6ZS30 2694 aa2.03□□□□□ -2.08
LSM5-205ENST00000409952 IGSF10Q6WRI0 2623 aa2.03□□□□□ -2.08
LSM5-205ENST00000409952 TRBV7-1A0A0A6YYK4 115 aa2.03□□□□□ -2.08
LSM5-205ENST00000409952 SSBP1Q04837 148 aaKnown RBP2.03□□□□□ -2.08
LSM5-205ENST00000409952 ZNF56Q15929 161 aa2.03□□□□□ -2.08
LSM5-205ENST00000409952 C10orf128Q5T292 105 aa2.03□□□□□ -2.08
LSM5-205ENST00000409952 BET1LQ9NYM9 111 aa2.03□□□□□ -2.08
LSM5-205ENST00000409952 V9GYS6 101 aa2.03□□□□□ -2.08
LSM5-205ENST00000409952 INTS1Q8N201 2190 aaKnown RBP2.03□□□□□ -2.08
LSM5-205ENST00000409952 MUC22E2RYF6 1773 aaPredicted RBP2.03□□□□□ -2.09
LSM5-205ENST00000409952 CDC42BPAQ5VT25 1732 aa2.03□□□□□ -2.09
LSM5-205ENST00000409952 MON2Q7Z3U7 1717 aa2.03□□□□□ -2.09
LSM5-205ENST00000409952 TROQ12816 1431 aaPredicted RBP2.02□□□□□ -2.09
LSM5-205ENST00000409952 MYO18AQ92614 2054 aaKnown RBP2.02□□□□□ -2.09
LSM5-205ENST00000409952 CLPSL1A2RUU4 121 aa2.02□□□□□ -2.09
LSM5-205ENST00000409952 GNG11P61952 73 aa2.02□□□□□ -2.09
LSM5-205ENST00000409952 Q6ZQY7 126 aa2.02□□□□□ -2.09
LSM5-205ENST00000409952 COX7B2Q8TF08 81 aa2.02□□□□□ -2.09
LSM5-205ENST00000409952 LINC00208Q96KT6 92 aa2.02□□□□□ -2.09
LSM5-205ENST00000409952 VAMP8Q9BV40 100 aa2.02□□□□□ -2.09
LSM5-205ENST00000409952 DSPP15924 2871 aaKnown RBP2.02□□□□□ -2.09
LSM5-205ENST00000409952 E9PCH4 1651 aa2.02□□□□□ -2.09
LSM5-205ENST00000409952 GCC2Q8IWJ2 1684 aa2.02□□□□□ -2.09
LSM5-205ENST00000409952 LY75O60449 1722 aa2.01□□□□□ -2.09
LSM5-205ENST00000409952 PCNX2A6NKB5 2137 aa2.01□□□□□ -2.09
LSM5-205ENST00000409952 GNGT2O14610 69 aa2.01□□□□□ -2.09
LSM5-205ENST00000409952 ZZEF1O43149 2961 aa2.01□□□□□ -2.09
LSM5-205ENST00000409952 EP300Q09472 2414 aaPredicted RBP2.01□□□□□ -2.09
LSM5-205ENST00000409952 VPS13AQ96RL7 3174 aa2□□□□□ -2.09
LSM5-205ENST00000409952 C4AP0C0L4 1744 aa2□□□□□ -2.09
LSM5-205ENST00000409952 NAP1L6A6NFF2 107 aa2□□□□□ -2.09
LSM5-205ENST00000409952 CAV3P56539 151 aa2□□□□□ -2.09
LSM5-205ENST00000409952 ELOF1P60002 83 aaKnown RBP2□□□□□ -2.09
LSM5-205ENST00000409952 KRTDAPP60985 99 aa2□□□□□ -2.09
LSM5-205ENST00000409952 FAM74A4Q5TZK3 123 aa2□□□□□ -2.09
LSM5-205ENST00000409952 DEFB119Q8N690 84 aa2□□□□□ -2.09
LSM5-205ENST00000409952 CCL19Q99731 98 aa2□□□□□ -2.09
LSM5-205ENST00000409952 IGF2RP11717 2491 aa2□□□□□ -2.09
LSM5-205ENST00000409952 A0A0G2JMZ2 1700 aa2□□□□□ -2.09
LSM5-205ENST00000409952 SCN7AQ01118 1682 aa1.99□□□□□ -2.09
LSM5-205ENST00000409952 CELSR3Q9NYQ7 3312 aa1.99□□□□□ -2.09
LSM5-205ENST00000409952 DNAH14Q0VDD8 3507 aa1.99□□□□□ -2.09
LSM5-205ENST00000409952 TRBV7-3A0A075B6L6 115 aa1.99□□□□□ -2.09
LSM5-205ENST00000409952 hADV29S1A0JD25 119 aa1.99□□□□□ -2.09
LSM5-205ENST00000409952 J3QKU1 62 aa1.99□□□□□ -2.09
LSM5-205ENST00000409952 KLKP1Q107X0 134 aa1.99□□□□□ -2.09
LSM5-205ENST00000409952 TSLPQ969D9 159 aa1.99□□□□□ -2.09
LSM5-205ENST00000409952 ABCC6O95255 1503 aa1.99□□□□□ -2.09
LSM5-205ENST00000409952 FRYLO94915 3013 aa1.99□□□□□ -2.09
LSM5-205ENST00000409952 CRYBG1Q9Y4K1 1723 aa1.99□□□□□ -2.09
LSM5-205ENST00000409952 NF1P21359 2839 aa1.99□□□□□ -2.09
LSM5-205ENST00000409952 CITO14578 2027 aa1.98□□□□□ -2.09
LSM5-205ENST00000409952 KDM3BQ7LBC6 1761 aa1.98□□□□□ -2.09
LSM5-205ENST00000409952 DLEC1Q9Y238 1755 aa1.98□□□□□ -2.09
LSM5-205ENST00000409952 RELNP78509 3460 aa1.98□□□□□ -2.09
LSM5-205ENST00000409952 MUC19Q7Z5P9 8384 aa1.98□□□□□ -2.09
LSM5-205ENST00000409952 FXYD1O00168 92 aa1.98□□□□□ -2.09
LSM5-205ENST00000409952 Q0VG73 95 aa1.98□□□□□ -2.09
LSM5-205ENST00000409952 SCP2D1Q9UJQ7 156 aa1.98□□□□□ -2.09
LSM5-205ENST00000409952 TET1Q8NFU7 2136 aa1.97□□□□□ -2.09
LSM5-205ENST00000409952 ARAP2Q8WZ64 1704 aa1.97□□□□□ -2.09
LSM5-205ENST00000409952 UBR3Q6ZT12 1888 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms