RNA–Protein interactions for RNA: ENST00000402468.3

C1GALT1-202, Transcript of core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene C1GALT1, Length 930 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1GALT1-202ENST00000402468 LRRC37A2A6NM11 1700 aa0.59□□□□□ -2.31
C1GALT1-202ENST00000402468 ERCC6L2Q5T890 1561 aa0.59□□□□□ -2.31
C1GALT1-202ENST00000402468 USF3Q68DE3 2245 aa0.59□□□□□ -2.31
C1GALT1-202ENST00000402468 KRTAP2-3P0C7H8 128 aa0.59□□□□□ -2.31
C1GALT1-202ENST00000402468 LINC00032P0C843 101 aa0.59□□□□□ -2.31
C1GALT1-202ENST00000402468 FAUP35544 74 aaKnown RBP0.59□□□□□ -2.31
C1GALT1-202ENST00000402468 FDCSPQ8NFU4 85 aa0.59□□□□□ -2.31
C1GALT1-202ENST00000402468 SMR3AQ99954 134 aa0.59□□□□□ -2.31
C1GALT1-202ENST00000402468 VAMP8Q9BV40 100 aa0.59□□□□□ -2.31
C1GALT1-202ENST00000402468 KRTAP2-4Q9BYR9 128 aa0.59□□□□□ -2.31
C1GALT1-202ENST00000402468 KRTAP2-1Q9BYU5 128 aa0.59□□□□□ -2.31
C1GALT1-202ENST00000402468 LRP6O75581 1613 aa0.59□□□□□ -2.32
C1GALT1-202ENST00000402468 PTPRZ1P23471 2315 aaPredicted RBP0.59□□□□□ -2.32
C1GALT1-202ENST00000402468 EHBP1L1Q8N3D4 1523 aa0.59□□□□□ -2.32
C1GALT1-202ENST00000402468 A0A0D9SFI3 127 aa0.58□□□□□ -2.32
C1GALT1-202ENST00000402468 PRO0255Q9UI72 69 aa0.58□□□□□ -2.32
C1GALT1-202ENST00000402468 UNC13BO14795 1591 aa0.57□□□□□ -2.32
C1GALT1-202ENST00000402468 POLQO75417 2590 aa0.57□□□□□ -2.32
C1GALT1-202ENST00000402468 VPS8Q8N3P4 1428 aa0.57□□□□□ -2.32
C1GALT1-202ENST00000402468 COL4A6Q14031 1691 aa0.57□□□□□ -2.32
C1GALT1-202ENST00000402468 S100A3P33764 101 aa0.57□□□□□ -2.32
C1GALT1-202ENST00000402468 C10orf113Q5VZT2 155 aa0.57□□□□□ -2.32
C1GALT1-202ENST00000402468 SPINK6Q6UWN8 80 aa0.57□□□□□ -2.32
C1GALT1-202ENST00000402468 LCN9Q8WX39 176 aa0.57□□□□□ -2.32
C1GALT1-202ENST00000402468 SPRR4Q96PI1 79 aa0.57□□□□□ -2.32
C1GALT1-202ENST00000402468 NSD3Q9BZ95 1437 aa0.56□□□□□ -2.32
C1GALT1-202ENST00000402468 ATOX1O00244 68 aa0.56□□□□□ -2.32
C1GALT1-202ENST00000402468 NDUFC1O43677 76 aa0.56□□□□□ -2.32
C1GALT1-202ENST00000402468 SAA2P0DJI9 122 aaPredicted RBP0.56□□□□□ -2.32
C1GALT1-202ENST00000402468 TMEM263Q8WUH6 116 aaKnown RBP0.56□□□□□ -2.32
C1GALT1-202ENST00000402468 MARF1Q9Y4F3 1742 aaKnown RBP0.55□□□□□ -2.32
C1GALT1-202ENST00000402468 ADGRL2O95490 1459 aa0.55□□□□□ -2.32
C1GALT1-202ENST00000402468 TEX14Q8IWB6 1497 aa0.55□□□□□ -2.32
C1GALT1-202ENST00000402468 A0A087WVE0 104 aa0.55□□□□□ -2.32
C1GALT1-202ENST00000402468 C7orf77A4D0Y5 90 aa0.55□□□□□ -2.32
C1GALT1-202ENST00000402468 PMCHL1Q16048 86 aa0.55□□□□□ -2.32
C1GALT1-202ENST00000402468 SERP2Q8N6R1 65 aa0.55□□□□□ -2.32
C1GALT1-202ENST00000402468 TRGV9Q99603 122 aa0.55□□□□□ -2.32
C1GALT1-202ENST00000402468 URB1O60287 2271 aaKnown RBP0.55□□□□□ -2.32
C1GALT1-202ENST00000402468 LAMC1P11047 1609 aa0.55□□□□□ -2.32
C1GALT1-202ENST00000402468 FYCO1Q9BQS8 1478 aa0.54□□□□□ -2.32
C1GALT1-202ENST00000402468 MLH3Q9UHC1 1453 aa0.54□□□□□ -2.32
C1GALT1-202ENST00000402468 PTPRQQ9UMZ3 2332 aa0.54□□□□□ -2.32
C1GALT1-202ENST00000402468 RAPGEF6Q8TEU7 1601 aa0.54□□□□□ -2.32
C1GALT1-202ENST00000402468 FXYD6-FXYD2A0A087WZ82 144 aa0.54□□□□□ -2.32
C1GALT1-202ENST00000402468 H7BZZ5 65 aa0.54□□□□□ -2.32
C1GALT1-202ENST00000402468 UQCRHP07919 91 aa0.54□□□□□ -2.32
C1GALT1-202ENST00000402468 KRTAP21-1Q3LI58 79 aa0.54□□□□□ -2.32
C1GALT1-202ENST00000402468 PSMG4Q5JS54 123 aa0.54□□□□□ -2.32
C1GALT1-202ENST00000402468 Q9H521 79 aa0.54□□□□□ -2.32
C1GALT1-202ENST00000402468 SPCS1Q9Y6A9 102 aa0.54□□□□□ -2.32
C1GALT1-202ENST00000402468 ANKRD26Q9UPS8 1709 aa0.54□□□□□ -2.32
C1GALT1-202ENST00000402468 PRDM15P57071 1507 aaPredicted RBP0.54□□□□□ -2.32
C1GALT1-202ENST00000402468 TRBV25-1A0A075B6N4 114 aa0.53□□□□□ -2.32
C1GALT1-202ENST00000402468 LINC01600Q96MT4 127 aa0.53□□□□□ -2.32
C1GALT1-202ENST00000402468 CNFNQ9BYD5 112 aa0.53□□□□□ -2.32
C1GALT1-202ENST00000402468 TP53AIP1Q9HCN2 124 aa0.53□□□□□ -2.32
C1GALT1-202ENST00000402468 GAPVD1Q14C86 1478 aa0.53□□□□□ -2.33
C1GALT1-202ENST00000402468 PLEKHH2Q8IVE3 1493 aa0.53□□□□□ -2.33
C1GALT1-202ENST00000402468 SYS1-DBNDD2H3BUS1 97 aa0.52□□□□□ -2.33
C1GALT1-202ENST00000402468 PRO1933Q9H354 126 aa0.52□□□□□ -2.33
C1GALT1-202ENST00000402468 ARHGEF12Q9NZN5 1544 aa0.52□□□□□ -2.33
C1GALT1-202ENST00000402468 DIP2CQ9Y2E4 1556 aa0.52□□□□□ -2.33
C1GALT1-202ENST00000402468 ANKRD36A6QL64 1941 aa0.52□□□□□ -2.33
C1GALT1-202ENST00000402468 PIEZO1Q92508 2521 aa0.52□□□□□ -2.33
C1GALT1-202ENST00000402468 UQCRHLA0A096LP55 91 aa0.51□□□□□ -2.33
C1GALT1-202ENST00000402468 TRBV6-1A0A0K0K1D8 114 aa0.51□□□□□ -2.33
C1GALT1-202ENST00000402468 POLA1P09884 1462 aaPredicted RBP0.51□□□□□ -2.33
C1GALT1-202ENST00000402468 NUP188Q5SRE5 1749 aa0.51□□□□□ -2.33
C1GALT1-202ENST00000402468 DEFB107AQ8IZN7 70 aa0.51□□□□□ -2.33
C1GALT1-202ENST00000402468 PKDREJQ9NTG1 2253 aa0.51□□□□□ -2.33
C1GALT1-202ENST00000402468 MYH4Q9Y623 1939 aa0.51□□□□□ -2.33
C1GALT1-202ENST00000402468 AKAP6Q13023 2319 aa0.5□□□□□ -2.33
C1GALT1-202ENST00000402468 KNDC1Q76NI1 1749 aa0.5□□□□□ -2.33
C1GALT1-202ENST00000402468 Q8IZM0 81 aa0.5□□□□□ -2.33
C1GALT1-202ENST00000402468 CELSR2Q9HCU4 2923 aa0.5□□□□□ -2.33
C1GALT1-202ENST00000402468 SPTBN1Q01082 2364 aaKnown RBP0.49□□□□□ -2.33
C1GALT1-202ENST00000402468 SMARCA2P51531 1590 aa0.49□□□□□ -2.33
C1GALT1-202ENST00000402468 C1orf167Q5SNV9 1468 aa0.49□□□□□ -2.33
C1GALT1-202ENST00000402468 MAGI1Q96QZ7 1491 aaPredicted RBP0.49□□□□□ -2.33
C1GALT1-202ENST00000402468 NLRP1Q9C000 1473 aa0.49□□□□□ -2.33
C1GALT1-202ENST00000402468 NRXN1Q9ULB1 1477 aa0.49□□□□□ -2.33
C1GALT1-202ENST00000402468 ZNF292O60281 2723 aa0.49□□□□□ -2.33
C1GALT1-202ENST00000402468 TRBV7-7A0A0K0K1E9 115 aa0.49□□□□□ -2.33
C1GALT1-202ENST00000402468 I3L2K1 104 aa0.49□□□□□ -2.33
C1GALT1-202ENST00000402468 C20orf78Q9BR46 151 aa0.49□□□□□ -2.33
C1GALT1-202ENST00000402468 RAPGEF2Q9Y4G8 1499 aa0.48□□□□□ -2.33
C1GALT1-202ENST00000402468 CFDP00746 253 aaPredicted RBP0.48□□□□□ -2.33
C1GALT1-202ENST00000402468 ARMS2P0C7Q2 107 aa0.48□□□□□ -2.33
C1GALT1-202ENST00000402468 Q5BKY6 102 aa0.48□□□□□ -2.33
C1GALT1-202ENST00000402468 LINC00846Q9NV44 126 aa0.48□□□□□ -2.33
C1GALT1-202ENST00000402468 PSENENQ9NZ42 101 aa0.48□□□□□ -2.33
C1GALT1-202ENST00000402468 HIGD1BQ9P298 99 aa0.48□□□□□ -2.33
C1GALT1-202ENST00000402468 ZFYVE26Q68DK2 2539 aa0.47□□□□□ -2.33
C1GALT1-202ENST00000402468 LINC00959A0A1B0GUT2 108 aa0.47□□□□□ -2.33
C1GALT1-202ENST00000402468 F8WEM9 126 aa0.47□□□□□ -2.33
C1GALT1-202ENST00000402468 SPINK1P00995 79 aa0.47□□□□□ -2.33
C1GALT1-202ENST00000402468 GNGT1P63211 74 aa0.47□□□□□ -2.33
C1GALT1-202ENST00000402468 PIGYQ3MUY2 71 aa0.47□□□□□ -2.33
C1GALT1-202ENST00000402468 BAZ1AQ9NRL2 1556 aaPredicted RBP0.47□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms