RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 A0A1B0GUV1 79 aa13.1□□□□□ -0.31
CLDND1-203ENST00000394181 H3BRM9 83 aa13.1□□□□□ -0.31
CLDND1-203ENST00000394181 SMIM1B2RUZ4 78 aa13.1□□□□□ -0.31
CLDND1-203ENST00000394181 K7ERJ3 54 aa13.1□□□□□ -0.31
CLDND1-203ENST00000394181 C11orf45Q8TAV5 145 aa13.1□□□□□ -0.31
CLDND1-203ENST00000394181 COX11Q9Y6N1 276 aa13.1□□□□□ -0.31
CLDND1-203ENST00000394181 COL7A1Q02388 2944 aa13.09□□□□□ -0.31
CLDND1-203ENST00000394181 PTTG1IPP53801 180 aa13.09□□□□□ -0.31
CLDND1-203ENST00000394181 SPATA25Q9BR10 227 aa13.09□□□□□ -0.31
CLDND1-203ENST00000394181 TAL2Q16559 108 aa13.08□□□□□ -0.31
CLDND1-203ENST00000394181 NDUFA12Q9UI09 145 aa13.08□□□□□ -0.31
CLDND1-203ENST00000394181 IGLV5-39A0A0G2JS06 123 aa13.08□□□□□ -0.32
CLDND1-203ENST00000394181 LINC00959A0A1B0GUT2 108 aa13.08□□□□□ -0.32
CLDND1-203ENST00000394181 SRSF9Q13242 221 aaKnown RBP eCLIP13.08□□□□□ -0.32
CLDND1-203ENST00000394181 LYPD5Q6UWN5 251 aa13.08□□□□□ -0.32
CLDND1-203ENST00000394181 RAB37Q96AX2 223 aa13.08□□□□□ -0.32
CLDND1-203ENST00000394181 A0A0J9YXY3 114 aa13.07□□□□□ -0.32
CLDND1-203ENST00000394181 A6NDN8 102 aa13.07□□□□□ -0.32
CLDND1-203ENST00000394181 LINC00269Q8N2A0 174 aa13.07□□□□□ -0.32
CLDND1-203ENST00000394181 NAA38Q9BRA0 125 aaKnown RBP13.07□□□□□ -0.32
CLDND1-203ENST00000394181 DNHD1Q96M86 4753 aa13.06□□□□□ -0.32
CLDND1-203ENST00000394181 NHP2Q9NX24 153 aaKnown RBP13.06□□□□□ -0.32
CLDND1-203ENST00000394181 LELP1Q5T871 98 aa13.05□□□□□ -0.32
CLDND1-203ENST00000394181 ZFAND6Q6FIF0 208 aa13.05□□□□□ -0.32
CLDND1-203ENST00000394181 DEFB131BA0A096LNP1 70 aa13.05□□□□□ -0.32
CLDND1-203ENST00000394181 IGHV3OR16-9A0A0B4J2B5 98 aa13.05□□□□□ -0.32
CLDND1-203ENST00000394181 DNAH9Q9NYC9 4486 aa13.04□□□□□ -0.32
CLDND1-203ENST00000394181 IGHV3-30P01768 117 aa13.04□□□□□ -0.32
CLDND1-203ENST00000394181 IGHV3-30-5P0DP03 117 aa13.04□□□□□ -0.32
CLDND1-203ENST00000394181 SH2D6Q7Z4S9 175 aa13.04□□□□□ -0.32
CLDND1-203ENST00000394181 C5orf38Q86SI9 138 aa13.04□□□□□ -0.32
CLDND1-203ENST00000394181 ANGP03950 147 aaKnown RBP13.03□□□□□ -0.32
CLDND1-203ENST00000394181 XCL1P47992 114 aa13.03□□□□□ -0.32
CLDND1-203ENST00000394181 ADAMTSL4-AS1Q5T5F5 129 aa13.03□□□□□ -0.32
CLDND1-203ENST00000394181 LITAFQ99732 161 aa13.03□□□□□ -0.32
CLDND1-203ENST00000394181 CCL25O15444 150 aa13.03□□□□□ -0.32
CLDND1-203ENST00000394181 SPANXB1Q9NS25 103 aaPredicted RBP13.03□□□□□ -0.32
CLDND1-203ENST00000394181 H3BNG1 76 aa13.02□□□□□ -0.33
CLDND1-203ENST00000394181 SMIM13P0DJ93 91 aa13.02□□□□□ -0.33
CLDND1-203ENST00000394181 LURAP1LQ8IV03 231 aa13.01□□□□□ -0.33
CLDND1-203ENST00000394181 ZNF625Q96I27 306 aaPredicted RBP13.01□□□□□ -0.33
CLDND1-203ENST00000394181 IGLV10-54A0A075B6I4 117 aa13.01□□□□□ -0.33
CLDND1-203ENST00000394181 Q9H8V8 135 aa13.01□□□□□ -0.33
CLDND1-203ENST00000394181 NDUFA1O15239 70 aa13□□□□□ -0.33
CLDND1-203ENST00000394181 REG3AQ06141 175 aa12.99□□□□□ -0.33
CLDND1-203ENST00000394181 SS18Q15532 418 aa12.99□□□□□ -0.33
CLDND1-203ENST00000394181 ESRGQ1W209 222 aa12.99□□□□□ -0.33
CLDND1-203ENST00000394181 A0A087WZ39 114 aa12.98□□□□□ -0.33
CLDND1-203ENST00000394181 H3BUT2 72 aa12.98□□□□□ -0.33
CLDND1-203ENST00000394181 WFDC10BQ8IUB3 73 aa12.98□□□□□ -0.33
CLDND1-203ENST00000394181 C9orf118A6NHY6 69 aa12.98□□□□□ -0.33
CLDND1-203ENST00000394181 MUSTN1Q8IVN3 82 aa12.98□□□□□ -0.33
CLDND1-203ENST00000394181 IGHV3-33P01772 117 aa12.97□□□□□ -0.33
CLDND1-203ENST00000394181 DAND5Q8N907 189 aa12.97□□□□□ -0.33
CLDND1-203ENST00000394181 TOMM7Q9P0U1 55 aa12.97□□□□□ -0.33
CLDND1-203ENST00000394181 KLK12Q9UKR0 248 aa12.97□□□□□ -0.33
CLDND1-203ENST00000394181 A0A0U1RRA0 63 aa12.96□□□□□ -0.33
CLDND1-203ENST00000394181 TMEM238C9JI98 176 aa12.96□□□□□ -0.33
CLDND1-203ENST00000394181 EIF4EBP3O60516 100 aaPredicted RBP12.96□□□□□ -0.33
CLDND1-203ENST00000394181 NPC2P61916 151 aa12.96□□□□□ -0.33
CLDND1-203ENST00000394181 VAMP3Q15836 100 aa12.96□□□□□ -0.33
CLDND1-203ENST00000394181 A0A1B0GWB2 263 aa12.96□□□□□ -0.34
CLDND1-203ENST00000394181 COX7B2Q8TF08 81 aa12.96□□□□□ -0.34
CLDND1-203ENST00000394181 CHCHD10Q8WYQ3 142 aaPredicted RBP12.96□□□□□ -0.34
CLDND1-203ENST00000394181 PRSS2P07478 247 aa12.95□□□□□ -0.34
CLDND1-203ENST00000394181 STAB2Q8WWQ8 2551 aa12.95□□□□□ -0.34
CLDND1-203ENST00000394181 APOMO95445 188 aa12.94□□□□□ -0.34
CLDND1-203ENST00000394181 A4D1N5 150 aa12.93□□□□□ -0.34
CLDND1-203ENST00000394181 ENHOQ6UWT2 76 aa12.93□□□□□ -0.34
CLDND1-203ENST00000394181 TRAV10A0A0B4J240 114 aa12.93□□□□□ -0.34
CLDND1-203ENST00000394181 CFC1BP0CG36 223 aa12.93□□□□□ -0.34
CLDND1-203ENST00000394181 CFC1P0CG37 223 aa12.93□□□□□ -0.34
CLDND1-203ENST00000394181 IGLL5B9A064 214 aa12.91□□□□□ -0.34
CLDND1-203ENST00000394181 CD164L2Q6UWJ8 174 aa12.91□□□□□ -0.34
CLDND1-203ENST00000394181 PRR34Q9NV39 138 aa12.91□□□□□ -0.34
CLDND1-203ENST00000394181 TMEM238LA0A1B0GVL6 79 aa12.91□□□□□ -0.34
CLDND1-203ENST00000394181 A6NJY4 79 aa12.91□□□□□ -0.34
CLDND1-203ENST00000394181 MIAQ16674 131 aa12.91□□□□□ -0.34
CLDND1-203ENST00000394181 SPANXDQ9BXN6 97 aa12.91□□□□□ -0.34
CLDND1-203ENST00000394181 SPANXCQ9NY87 97 aa12.91□□□□□ -0.34
CLDND1-203ENST00000394181 A0A1W2PPM0 123 aa12.9□□□□□ -0.34
CLDND1-203ENST00000394181 FOXI1Q12951 378 aa12.9□□□□□ -0.34
CLDND1-203ENST00000394181 TIMM17BO60830 172 aa12.89□□□□□ -0.35
CLDND1-203ENST00000394181 UBE2V1Q13404 147 aa12.89□□□□□ -0.35
CLDND1-203ENST00000394181 MEGF8Q7Z7M0 2845 aa12.88□□□□□ -0.35
CLDND1-203ENST00000394181 COX7A2LO14548 114 aa12.88□□□□□ -0.35
CLDND1-203ENST00000394181 UBE2WQ96B02 151 aa12.88□□□□□ -0.35
CLDND1-203ENST00000394181 PRKDCP78527 4128 aaKnown RBP12.88□□□□□ -0.35
CLDND1-203ENST00000394181 GAGE12HA6NDE8 117 aa12.87□□□□□ -0.35
CLDND1-203ENST00000394181 MEIG1Q5JSS6 88 aa12.87□□□□□ -0.35
CLDND1-203ENST00000394181 PGPEP1Q9NXJ5 209 aa12.87□□□□□ -0.35
CLDND1-203ENST00000394181 LYSTQ99698 3801 aa12.87□□□□□ -0.35
CLDND1-203ENST00000394181 RPL24P83731 157 aaKnown RBP12.87□□□□□ -0.35
CLDND1-203ENST00000394181 CIRBPQ14011 172 aaKnown RBP12.86□□□□□ -0.35
CLDND1-203ENST00000394181 C6orf226Q5I0X4 101 aa12.86□□□□□ -0.35
CLDND1-203ENST00000394181 C2orf82Q6UX34 121 aa12.86□□□□□ -0.35
CLDND1-203ENST00000394181 B9D2Q9BPU9 175 aa12.86□□□□□ -0.35
CLDND1-203ENST00000394181 HERV-K104P63124 156 aa12.86□□□□□ -0.35
CLDND1-203ENST00000394181 SFTA2Q6UW10 78 aa12.86□□□□□ -0.35
CLDND1-203ENST00000394181 SOSTDC1Q6X4U4 206 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms