RNA–Protein interactions for RNA: ENST00000394023.7

SMARCC2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 4,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-203ENST00000394023 SNCGO76070 127 aa13.49□□□□□ -0.25
SMARCC2-203ENST00000394023 CRYBA4P53673 196 aa13.49□□□□□ -0.25
SMARCC2-203ENST00000394023 LINC01620Q4KN68 170 aa13.48□□□□□ -0.25
SMARCC2-203ENST00000394023 C9orf66Q5T8R8 295 aa13.48□□□□□ -0.25
SMARCC2-203ENST00000394023 CUBNO60494 3623 aa13.48□□□□□ -0.25
SMARCC2-203ENST00000394023 FAM222AQ5U5X8 452 aa13.48□□□□□ -0.25
SMARCC2-203ENST00000394023 TEN1Q86WV5 123 aa13.48□□□□□ -0.25
SMARCC2-203ENST00000394023 CARD19Q96LW7 228 aa13.48□□□□□ -0.25
SMARCC2-203ENST00000394023 TRAV8-4A0A0B4J246 113 aa13.48□□□□□ -0.25
SMARCC2-203ENST00000394023 PIK3CD-AS1Q5SR53 167 aa13.48□□□□□ -0.25
SMARCC2-203ENST00000394023 LINC00242Q5T6M2 205 aa13.48□□□□□ -0.25
SMARCC2-203ENST00000394023 UBE2D3P61077 147 aa13.47□□□□□ -0.25
SMARCC2-203ENST00000394023 UBE2D2P62837 147 aa13.47□□□□□ -0.25
SMARCC2-203ENST00000394023 APOC4P55056 127 aa13.46□□□□□ -0.25
SMARCC2-203ENST00000394023 IFITM1P13164 125 aa13.46□□□□□ -0.26
SMARCC2-203ENST00000394023 FHL3Q13643 280 aa13.46□□□□□ -0.26
SMARCC2-203ENST00000394023 COX7B2Q8TF08 81 aa13.46□□□□□ -0.26
SMARCC2-203ENST00000394023 A0A0B4J2C4 111 aa13.45□□□□□ -0.26
SMARCC2-203ENST00000394023 TRIAP1O43715 76 aa13.45□□□□□ -0.26
SMARCC2-203ENST00000394023 ZFAND6Q6FIF0 208 aa13.45□□□□□ -0.26
SMARCC2-203ENST00000394023 TIRAPP58753 221 aa13.45□□□□□ -0.26
SMARCC2-203ENST00000394023 MIR7-3HGQ8N6C7 128 aa13.45□□□□□ -0.26
SMARCC2-203ENST00000394023 UBE2WQ96B02 151 aa13.44□□□□□ -0.26
SMARCC2-203ENST00000394023 CSMD2Q7Z408 3487 aa13.44□□□□□ -0.26
SMARCC2-203ENST00000394023 TRBV6-4A0A1B0GX49 114 aa13.44□□□□□ -0.26
SMARCC2-203ENST00000394023 TRBV6-8A0A0A6YYG3 113 aa13.43□□□□□ -0.26
SMARCC2-203ENST00000394023 CDC42SE2Q9NRR3 84 aa13.43□□□□□ -0.26
SMARCC2-203ENST00000394023 PRO0255Q9UI72 69 aa13.42□□□□□ -0.26
SMARCC2-203ENST00000394023 LINC00308Q8TCZ7 52 aa13.42□□□□□ -0.26
SMARCC2-203ENST00000394023 SND1-IT1Q9HBX3 110 aa13.42□□□□□ -0.26
SMARCC2-203ENST00000394023 NTM-AS1Q6ZSK4 140 aa13.42□□□□□ -0.26
SMARCC2-203ENST00000394023 NDUFA1O15239 70 aa13.41□□□□□ -0.26
SMARCC2-203ENST00000394023 TTC32Q5I0X7 151 aa13.41□□□□□ -0.26
SMARCC2-203ENST00000394023 UBR5O95071 2799 aaPredicted RBP13.41□□□□□ -0.26
SMARCC2-203ENST00000394023 C16orf95Q9H693 158 aa13.41□□□□□ -0.26
SMARCC2-203ENST00000394023 HERV-K104P63124 156 aa13.4□□□□□ -0.26
SMARCC2-203ENST00000394023 C3orf56Q8N813 242 aa13.4□□□□□ -0.26
SMARCC2-203ENST00000394023 TEP1Q99973 2627 aaKnown RBP13.4□□□□□ -0.26
SMARCC2-203ENST00000394023 IGLV4-60A0A075B6I1 120 aa13.39□□□□□ -0.27
SMARCC2-203ENST00000394023 TRAV26-1A0A087WT03 109 aa13.39□□□□□ -0.27
SMARCC2-203ENST00000394023 SMIM1B2RUZ4 78 aa13.38□□□□□ -0.27
SMARCC2-203ENST00000394023 TEX49A0A1B0GTD5 131 aa13.37□□□□□ -0.27
SMARCC2-203ENST00000394023 ATP5G1P05496 136 aa13.37□□□□□ -0.27
SMARCC2-203ENST00000394023 LINC00269Q8N2A0 174 aa13.37□□□□□ -0.27
SMARCC2-203ENST00000394023 GAGE2BQ13066 116 aa13.36□□□□□ -0.27
SMARCC2-203ENST00000394023 FHL2Q14192 279 aa13.36□□□□□ -0.27
SMARCC2-203ENST00000394023 GAGE2EQ4V326 116 aa13.36□□□□□ -0.27
SMARCC2-203ENST00000394023 GAGE2DQ9UEU5 116 aa13.36□□□□□ -0.27
SMARCC2-203ENST00000394023 S100A7L2Q5SY68 101 aa13.35□□□□□ -0.27
SMARCC2-203ENST00000394023 SPANXDQ9BXN6 97 aa13.35□□□□□ -0.27
SMARCC2-203ENST00000394023 SPANXCQ9NY87 97 aa13.35□□□□□ -0.27
SMARCC2-203ENST00000394023 TRAV13-2A0A0B4J235 113 aa13.34□□□□□ -0.27
SMARCC2-203ENST00000394023 TRBV10-2A0A0K0K1G8 114 aa13.34□□□□□ -0.27
SMARCC2-203ENST00000394023 SPART-AS1P0CW21 52 aa13.34□□□□□ -0.27
SMARCC2-203ENST00000394023 A8MTW9 85 aa13.34□□□□□ -0.27
SMARCC2-203ENST00000394023 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.34□□□□□ -0.27
SMARCC2-203ENST00000394023 CLUHP3Q96NS8 147 aa13.33□□□□□ -0.28
SMARCC2-203ENST00000394023 TRBV30A0A0K0K1B3 111 aa13.32□□□□□ -0.28
SMARCC2-203ENST00000394023 Q9HAA7 133 aa13.32□□□□□ -0.28
SMARCC2-203ENST00000394023 IGHV4-28A0A0C4DH34 117 aa13.32□□□□□ -0.28
SMARCC2-203ENST00000394023 BAALC-AS2P0C853 105 aa13.32□□□□□ -0.28
SMARCC2-203ENST00000394023 EDA2RQ9HAV5 297 aa13.32□□□□□ -0.28
SMARCC2-203ENST00000394023 KLK12Q9UKR0 248 aa13.32□□□□□ -0.28
SMARCC2-203ENST00000394023 COX7A2LO14548 114 aa13.31□□□□□ -0.28
SMARCC2-203ENST00000394023 VPS13CQ709C8 3753 aa13.31□□□□□ -0.28
SMARCC2-203ENST00000394023 GAGE2AQ6NT46 116 aa13.3□□□□□ -0.28
SMARCC2-203ENST00000394023 ANAPC13Q9BS18 74 aa13.3□□□□□ -0.28
SMARCC2-203ENST00000394023 MT-ATP8P03928 68 aa13.3□□□□□ -0.28
SMARCC2-203ENST00000394023 SMCPP49901 116 aaPredicted RBP13.3□□□□□ -0.28
SMARCC2-203ENST00000394023 MRPL23Q16540 153 aaKnown RBP13.3□□□□□ -0.28
SMARCC2-203ENST00000394023 KRTAP1-1Q07627 177 aa13.3□□□□□ -0.28
SMARCC2-203ENST00000394023 FAM110AQ9BQ89 295 aa13.3□□□□□ -0.28
SMARCC2-203ENST00000394023 MAST4O15021 2626 aa13.29□□□□□ -0.28
SMARCC2-203ENST00000394023 DEFB121Q5J5C9 76 aa13.29□□□□□ -0.28
SMARCC2-203ENST00000394023 GIG44P09565 113 aaPredicted RBP13.29□□□□□ -0.28
SMARCC2-203ENST00000394023 LINC00526Q96FQ7 95 aa13.29□□□□□ -0.28
SMARCC2-203ENST00000394023 LINC00959A0A1B0GUT2 108 aa13.28□□□□□ -0.28
SMARCC2-203ENST00000394023 PRO0461Q9UI25 63 aa13.28□□□□□ -0.28
SMARCC2-203ENST00000394023 C15orf53Q8NAA6 179 aa13.27□□□□□ -0.28
SMARCC2-203ENST00000394023 TIMM17BO60830 172 aa13.27□□□□□ -0.28
SMARCC2-203ENST00000394023 SMIM9A6NGZ8 99 aa13.27□□□□□ -0.29
SMARCC2-203ENST00000394023 OXLD1Q5BKU9 147 aa13.27□□□□□ -0.29
SMARCC2-203ENST00000394023 EIF4EBP3O60516 100 aaPredicted RBP13.26□□□□□ -0.29
SMARCC2-203ENST00000394023 OVOL2Q9BRP0 275 aa13.26□□□□□ -0.29
SMARCC2-203ENST00000394023 CSDC2Q9Y534 153 aaKnown RBP13.26□□□□□ -0.29
SMARCC2-203ENST00000394023 H7C423 109 aa13.25□□□□□ -0.29
SMARCC2-203ENST00000394023 REG3AQ06141 175 aa13.25□□□□□ -0.29
SMARCC2-203ENST00000394023 LYRM9A8MSI8 78 aa13.25□□□□□ -0.29
SMARCC2-203ENST00000394023 CHCHD10Q8WYQ3 142 aaPredicted RBP13.25□□□□□ -0.29
SMARCC2-203ENST00000394023 MRAPQ8TCY5 172 aa13.23□□□□□ -0.29
SMARCC2-203ENST00000394023 H3BT86 120 aa13.23□□□□□ -0.29
SMARCC2-203ENST00000394023 LECT2O14960 151 aa13.22□□□□□ -0.29
SMARCC2-203ENST00000394023 C19orf73Q9NVV2 129 aa13.22□□□□□ -0.29
SMARCC2-203ENST00000394023 ZNF561-AS1K7EIQ3 104 aa13.22□□□□□ -0.29
SMARCC2-203ENST00000394023 KRTAP10-3P60369 221 aa13.22□□□□□ -0.29
SMARCC2-203ENST00000394023 LITAFQ99732 161 aa13.22□□□□□ -0.29
SMARCC2-203ENST00000394023 IGHV4-30-4P0DP06 118 aa13.21□□□□□ -0.29
SMARCC2-203ENST00000394023 KIR2DL5BQ8NHK3 375 aa13.21□□□□□ -0.29
SMARCC2-203ENST00000394023 IGLV5-39A0A0G2JS06 123 aa13.21□□□□□ -0.3
SMARCC2-203ENST00000394023 LST1O00453 97 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms