RNA–Protein interactions for RNA: ENST00000393860.7

RAB5C-202, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-202ENST00000393860 HSD52Q0P140 79 aa13.5□□□□□ -0.25
RAB5C-202ENST00000393860 SCGB1D4Q6XE38 83 aa13.5□□□□□ -0.25
RAB5C-202ENST00000393860 SEC11AP67812 179 aa13.49□□□□□ -0.25
RAB5C-202ENST00000393860 LINC00959A0A1B0GUT2 108 aa13.48□□□□□ -0.25
RAB5C-202ENST00000393860 ANGP03950 147 aaKnown RBP13.48□□□□□ -0.25
RAB5C-202ENST00000393860 LINC00269Q8N2A0 174 aa13.48□□□□□ -0.25
RAB5C-202ENST00000393860 DNHD1Q96M86 4753 aa13.47□□□□□ -0.25
RAB5C-202ENST00000393860 TRAV10A0A0B4J240 114 aa13.47□□□□□ -0.25
RAB5C-202ENST00000393860 A0A1B0GV90 55 aa13.47□□□□□ -0.25
RAB5C-202ENST00000393860 LBHQ53QV2 105 aaPredicted RBP13.47□□□□□ -0.25
RAB5C-202ENST00000393860 B9D2Q9BPU9 175 aa13.47□□□□□ -0.25
RAB5C-202ENST00000393860 SMIM1B2RUZ4 78 aa13.46□□□□□ -0.25
RAB5C-202ENST00000393860 GCSHP23434 173 aa13.46□□□□□ -0.25
RAB5C-202ENST00000393860 COL5A1-AS1Q5SY13 56 aa13.46□□□□□ -0.25
RAB5C-202ENST00000393860 DNAH9Q9NYC9 4486 aa13.46□□□□□ -0.26
RAB5C-202ENST00000393860 WFDC10BQ8IUB3 73 aa13.45□□□□□ -0.26
RAB5C-202ENST00000393860 K7EP13 123 aa13.45□□□□□ -0.26
RAB5C-202ENST00000393860 XCL1P47992 114 aa13.45□□□□□ -0.26
RAB5C-202ENST00000393860 ESRGQ1W209 222 aa13.45□□□□□ -0.26
RAB5C-202ENST00000393860 HIST1H4GQ99525 98 aa13.45□□□□□ -0.26
RAB5C-202ENST00000393860 CCL25O15444 150 aa13.44□□□□□ -0.26
RAB5C-202ENST00000393860 IGHV3-30P01768 117 aa13.44□□□□□ -0.26
RAB5C-202ENST00000393860 IGHV3-33P01772 117 aa13.44□□□□□ -0.26
RAB5C-202ENST00000393860 IGHV3-30-5P0DP03 117 aa13.44□□□□□ -0.26
RAB5C-202ENST00000393860 C10orf126Q8N4M7 172 aa13.44□□□□□ -0.26
RAB5C-202ENST00000393860 ORAOV1Q8WV07 137 aa13.43□□□□□ -0.26
RAB5C-202ENST00000393860 COL7A1Q02388 2944 aa13.43□□□□□ -0.26
RAB5C-202ENST00000393860 IGLV10-54A0A075B6I4 117 aa13.43□□□□□ -0.26
RAB5C-202ENST00000393860 FXYD2P54710 66 aa13.43□□□□□ -0.26
RAB5C-202ENST00000393860 REG3AQ06141 175 aa13.43□□□□□ -0.26
RAB5C-202ENST00000393860 SS18Q15532 418 aa13.43□□□□□ -0.26
RAB5C-202ENST00000393860 Q6ZVH6 145 aa13.43□□□□□ -0.26
RAB5C-202ENST00000393860 C5orf38Q86SI9 138 aa13.43□□□□□ -0.26
RAB5C-202ENST00000393860 NDUFA12Q9UI09 145 aa13.43□□□□□ -0.26
RAB5C-202ENST00000393860 IGLV5-39A0A0G2JS06 123 aa13.42□□□□□ -0.26
RAB5C-202ENST00000393860 CEND1Q8N111 149 aa13.41□□□□□ -0.26
RAB5C-202ENST00000393860 KLK12Q9UKR0 248 aa13.41□□□□□ -0.26
RAB5C-202ENST00000393860 IGHV3OR16-9A0A0B4J2B5 98 aa13.41□□□□□ -0.26
RAB5C-202ENST00000393860 A0A0J9YXY3 114 aa13.4□□□□□ -0.26
RAB5C-202ENST00000393860 ZFAND6Q6FIF0 208 aa13.4□□□□□ -0.26
RAB5C-202ENST00000393860 SRSF9Q13242 221 aaKnown RBP eCLIP13.39□□□□□ -0.27
RAB5C-202ENST00000393860 IGLL5B9A064 214 aa13.38□□□□□ -0.27
RAB5C-202ENST00000393860 PTTG1IPP53801 180 aa13.38□□□□□ -0.27
RAB5C-202ENST00000393860 TOMM7Q9P0U1 55 aa13.38□□□□□ -0.27
RAB5C-202ENST00000393860 TAL2Q16559 108 aa13.37□□□□□ -0.27
RAB5C-202ENST00000393860 CHCHD10Q8WYQ3 142 aaPredicted RBP13.37□□□□□ -0.27
RAB5C-202ENST00000393860 ZNF625Q96I27 306 aaPredicted RBP13.37□□□□□ -0.27
RAB5C-202ENST00000393860 A0A087WZ39 114 aa13.36□□□□□ -0.27
RAB5C-202ENST00000393860 TM2D2Q9BX73 214 aa13.36□□□□□ -0.27
RAB5C-202ENST00000393860 Q9H8V8 135 aa13.36□□□□□ -0.27
RAB5C-202ENST00000393860 NDUFA1O15239 70 aa13.35□□□□□ -0.27
RAB5C-202ENST00000393860 C15orf53Q8NAA6 179 aa13.35□□□□□ -0.27
RAB5C-202ENST00000393860 K7ERJ3 54 aa13.35□□□□□ -0.27
RAB5C-202ENST00000393860 ENHOQ6UWT2 76 aa13.35□□□□□ -0.27
RAB5C-202ENST00000393860 A6NDN8 102 aa13.34□□□□□ -0.27
RAB5C-202ENST00000393860 TAX1BP3O14907 124 aa13.34□□□□□ -0.27
RAB5C-202ENST00000393860 COX7B2Q8TF08 81 aa13.34□□□□□ -0.27
RAB5C-202ENST00000393860 SPANXB1Q9NS25 103 aaPredicted RBP13.34□□□□□ -0.27
RAB5C-202ENST00000393860 NHP2Q9NX24 153 aaKnown RBP13.34□□□□□ -0.27
RAB5C-202ENST00000393860 UBE2WQ96B02 151 aa13.33□□□□□ -0.28
RAB5C-202ENST00000393860 RAB37Q96AX2 223 aa13.33□□□□□ -0.28
RAB5C-202ENST00000393860 CD164L2Q6UWJ8 174 aa13.32□□□□□ -0.28
RAB5C-202ENST00000393860 LITAFQ99732 161 aa13.32□□□□□ -0.28
RAB5C-202ENST00000393860 PRR34Q9NV39 138 aa13.32□□□□□ -0.28
RAB5C-202ENST00000393860 CRPP02741 224 aa13.31□□□□□ -0.28
RAB5C-202ENST00000393860 ADAMTSL4-AS1Q5T5F5 129 aa13.31□□□□□ -0.28
RAB5C-202ENST00000393860 LINC00588Q9Y4M8 146 aa13.31□□□□□ -0.28
RAB5C-202ENST00000393860 A0A0U1RRA0 63 aa13.31□□□□□ -0.28
RAB5C-202ENST00000393860 GAGE12HA6NDE8 117 aa13.31□□□□□ -0.28
RAB5C-202ENST00000393860 TMEM238C9JI98 176 aa13.31□□□□□ -0.28
RAB5C-202ENST00000393860 NPC2P61916 151 aa13.3□□□□□ -0.28
RAB5C-202ENST00000393860 CFAP161Q6P656 301 aa13.3□□□□□ -0.28
RAB5C-202ENST00000393860 COX7A2LO14548 114 aa13.29□□□□□ -0.28
RAB5C-202ENST00000393860 FOXI1Q12951 378 aa13.29□□□□□ -0.28
RAB5C-202ENST00000393860 KRTAP21-3Q3LHN1 58 aa13.29□□□□□ -0.28
RAB5C-202ENST00000393860 DAND5Q8N907 189 aa13.29□□□□□ -0.28
RAB5C-202ENST00000393860 STAB2Q8WWQ8 2551 aa13.29□□□□□ -0.28
RAB5C-202ENST00000393860 NAA38Q9BRA0 125 aaKnown RBP13.29□□□□□ -0.28
RAB5C-202ENST00000393860 NHLRC4P0CG21 123 aaPredicted RBP13.28□□□□□ -0.28
RAB5C-202ENST00000393860 MUSTN1Q8IVN3 82 aa13.28□□□□□ -0.28
RAB5C-202ENST00000393860 COX11Q9Y6N1 276 aa13.28□□□□□ -0.28
RAB5C-202ENST00000393860 MEGF8Q7Z7M0 2845 aa13.28□□□□□ -0.28
RAB5C-202ENST00000393860 SMIM13P0DJ93 91 aa13.27□□□□□ -0.28
RAB5C-202ENST00000393860 PRKDCP78527 4128 aaKnown RBP13.27□□□□□ -0.29
RAB5C-202ENST00000393860 MALP21145 153 aa13.27□□□□□ -0.29
RAB5C-202ENST00000393860 LINC01556Q5JQF7 62 aa13.27□□□□□ -0.29
RAB5C-202ENST00000393860 MEIG1Q5JSS6 88 aa13.27□□□□□ -0.29
RAB5C-202ENST00000393860 PRSS2P07478 247 aa13.26□□□□□ -0.29
RAB5C-202ENST00000393860 CCL18P55774 89 aa13.25□□□□□ -0.29
RAB5C-202ENST00000393860 MIAQ16674 131 aa13.24□□□□□ -0.29
RAB5C-202ENST00000393860 C6orf226Q5I0X4 101 aa13.24□□□□□ -0.29
RAB5C-202ENST00000393860 SPANXDQ9BXN6 97 aa13.24□□□□□ -0.29
RAB5C-202ENST00000393860 SPANXCQ9NY87 97 aa13.24□□□□□ -0.29
RAB5C-202ENST00000393860 APOMO95445 188 aa13.23□□□□□ -0.29
RAB5C-202ENST00000393860 C2orf82Q6UX34 121 aa13.23□□□□□ -0.29
RAB5C-202ENST00000393860 EIF4EBP3O60516 100 aaPredicted RBP13.23□□□□□ -0.29
RAB5C-202ENST00000393860 TIMM17BO60830 172 aa13.23□□□□□ -0.29
RAB5C-202ENST00000393860 DNAH10OSP0CZ25 163 aa13.23□□□□□ -0.29
RAB5C-202ENST00000393860 HERV-K104P63124 156 aa13.23□□□□□ -0.29
RAB5C-202ENST00000393860 LINC01561Q8N1V8 128 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 148.1 ms