RNA–Protein interactions for RNA: ENST00000391066.1

RNU6-1000P-201, Transcript of RNA, U6 small nuclear 1000, pseudogene, humanhuman

BASIC

Gene RNU6-1000P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1000P-201ENST00000391066 TNFP01375 233 aa-1.7□□□□□ -2.68
RNU6-1000P-201ENST00000391066 AKAP9Q99996 3911 aa-1.7□□□□□ -2.68
RNU6-1000P-201ENST00000391066 GRIN2AQ12879 1464 aa-1.7□□□□□ -2.68
RNU6-1000P-201ENST00000391066 SPRR2AP35326 72 aa-1.71□□□□□ -2.68
RNU6-1000P-201ENST00000391066 C12orf73Q69YU5 71 aa-1.71□□□□□ -2.68
RNU6-1000P-201ENST00000391066 DEFB123Q8N688 67 aa-1.71□□□□□ -2.68
RNU6-1000P-201ENST00000391066 NDUFA4L2Q9NRX3 87 aa-1.71□□□□□ -2.68
RNU6-1000P-201ENST00000391066 RIMS1Q86UR5 1692 aaKnown RBP-1.71□□□□□ -2.68
RNU6-1000P-201ENST00000391066 DYNC1H1Q14204 4646 aaKnown RBP-1.72□□□□□ -2.68
RNU6-1000P-201ENST00000391066 TEX15Q9BXT5 2789 aa-1.72□□□□□ -2.68
RNU6-1000P-201ENST00000391066 F8VRH5 84 aa-1.72□□□□□ -2.68
RNU6-1000P-201ENST00000391066 PDCD10Q9BUL8 212 aa-1.72□□□□□ -2.68
RNU6-1000P-201ENST00000391066 VPS13BQ7Z7G8 4022 aa-1.72□□□□□ -2.68
RNU6-1000P-201ENST00000391066 CUBNO60494 3623 aa-1.73□□□□□ -2.69
RNU6-1000P-201ENST00000391066 CFTRP13569 1480 aa-1.73□□□□□ -2.69
RNU6-1000P-201ENST00000391066 APOC3P02656 99 aa-1.73□□□□□ -2.69
RNU6-1000P-201ENST00000391066 TPPP2P59282 170 aa-1.73□□□□□ -2.69
RNU6-1000P-201ENST00000391066 KLK9Q2XQG4 91 aa-1.73□□□□□ -2.69
RNU6-1000P-201ENST00000391066 LSM10Q969L4 123 aaKnown RBP-1.74□□□□□ -2.69
RNU6-1000P-201ENST00000391066 DNAH9Q9NYC9 4486 aa-1.74□□□□□ -2.69
RNU6-1000P-201ENST00000391066 MAFIPQ8WZ33 124 aa-1.75□□□□□ -2.69
RNU6-1000P-201ENST00000391066 KDM5AP29375 1690 aaKnown RBP-1.75□□□□□ -2.69
RNU6-1000P-201ENST00000391066 ANKRD11Q6UB99 2663 aaPredicted RBP-1.75□□□□□ -2.69
RNU6-1000P-201ENST00000391066 DNAH7Q8WXX0 4024 aa-1.76□□□□□ -2.69
RNU6-1000P-201ENST00000391066 COPS9Q8WXC6 57 aa-1.76□□□□□ -2.69
RNU6-1000P-201ENST00000391066 DNAH1Q9P2D7 4330 aa-1.76□□□□□ -2.69
RNU6-1000P-201ENST00000391066 SPG11Q96JI7 2443 aa-1.77□□□□□ -2.69
RNU6-1000P-201ENST00000391066 MGST2Q99735 147 aa-1.77□□□□□ -2.69
RNU6-1000P-201ENST00000391066 LINC01558Q9Y6Z2 57 aa-1.77□□□□□ -2.69
RNU6-1000P-201ENST00000391066 URB1O60287 2271 aaKnown RBP-1.77□□□□□ -2.69
RNU6-1000P-201ENST00000391066 GAPVD1Q14C86 1478 aa-1.77□□□□□ -2.69
RNU6-1000P-201ENST00000391066 MGAM2Q2M2H8 2515 aa-1.77□□□□□ -2.69
RNU6-1000P-201ENST00000391066 RIF1Q5UIP0 2472 aaKnown RBP-1.78□□□□□ -2.69
RNU6-1000P-201ENST00000391066 IGLC7A0M8Q6 106 aa-1.78□□□□□ -2.69
RNU6-1000P-201ENST00000391066 SPINK4O60575 86 aa-1.78□□□□□ -2.69
RNU6-1000P-201ENST00000391066 FXYD6Q9H0Q3 95 aa-1.78□□□□□ -2.69
RNU6-1000P-201ENST00000391066 DYNLRB1Q9NP97 96 aa-1.78□□□□□ -2.69
RNU6-1000P-201ENST00000391066 APOBP04114 4563 aaKnown RBP-1.78□□□□□ -2.69
RNU6-1000P-201ENST00000391066 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-1.79□□□□□ -2.7
RNU6-1000P-201ENST00000391066 M0R2T5 61 aa-1.79□□□□□ -2.7
RNU6-1000P-201ENST00000391066 SERP1Q9Y6X1 66 aa-1.79□□□□□ -2.7
RNU6-1000P-201ENST00000391066 SHANK2Q9UPX8 1470 aa-1.8□□□□□ -2.7
RNU6-1000P-201ENST00000391066 GOLGA4Q13439 2230 aaKnown RBP-1.8□□□□□ -2.7
RNU6-1000P-201ENST00000391066 ARPC4P59998 168 aa-1.8□□□□□ -2.7
RNU6-1000P-201ENST00000391066 PFDN5Q99471 154 aa-1.8□□□□□ -2.7
RNU6-1000P-201ENST00000391066 RERGLQ9H628 205 aa-1.8□□□□□ -2.7
RNU6-1000P-201ENST00000391066 MTORP42345 2549 aa-1.8□□□□□ -2.7
RNU6-1000P-201ENST00000391066 RAPGEF6Q8TEU7 1601 aa-1.8□□□□□ -2.7
RNU6-1000P-201ENST00000391066 ARHGEF12Q9NZN5 1544 aa-1.81□□□□□ -2.7
RNU6-1000P-201ENST00000391066 DNAH11Q96DT5 4516 aa-1.81□□□□□ -2.7
RNU6-1000P-201ENST00000391066 TRBV7-3A0A075B6L6 115 aa-1.81□□□□□ -2.7
RNU6-1000P-201ENST00000391066 SACSQ9NZJ4 4579 aa-1.81□□□□□ -2.7
RNU6-1000P-201ENST00000391066 IQSEC2Q5JU85 1478 aa-1.82□□□□□ -2.7
RNU6-1000P-201ENST00000391066 HTTP42858 3142 aa-1.82□□□□□ -2.7
RNU6-1000P-201ENST00000391066 NBASA2RRP1 2371 aa-1.82□□□□□ -2.7
RNU6-1000P-201ENST00000391066 COL6A5A8TX70 2615 aa-1.82□□□□□ -2.7
RNU6-1000P-201ENST00000391066 HMGN4O00479 90 aa-1.83□□□□□ -2.7
RNU6-1000P-201ENST00000391066 TSLPQ969D9 159 aa-1.83□□□□□ -2.7
RNU6-1000P-201ENST00000391066 POLA1P09884 1462 aaPredicted RBP-1.83□□□□□ -2.7
RNU6-1000P-201ENST00000391066 TULP4Q9NRJ4 1543 aa-1.84□□□□□ -2.7
RNU6-1000P-201ENST00000391066 SPRR2FQ96RM1 72 aa-1.84□□□□□ -2.7
RNU6-1000P-201ENST00000391066 SNRNP25Q9BV90 132 aaKnown RBP-1.84□□□□□ -2.7
RNU6-1000P-201ENST00000391066 NBEAL2Q6ZNJ1 2754 aa-1.84□□□□□ -2.7
RNU6-1000P-201ENST00000391066 NSD3Q9BZ95 1437 aa-1.84□□□□□ -2.7
RNU6-1000P-201ENST00000391066 CCDC168Q8NDH2 2452 aa-1.85□□□□□ -2.71
RNU6-1000P-201ENST00000391066 ITPR1Q14643 2758 aa-1.85□□□□□ -2.71
RNU6-1000P-201ENST00000391066 LRRK2Q5S007 2527 aa-1.85□□□□□ -2.71
RNU6-1000P-201ENST00000391066 BICRAQ9NZM4 1560 aa-1.85□□□□□ -2.71
RNU6-1000P-201ENST00000391066 SFT2D2O95562 160 aa-1.86□□□□□ -2.71
RNU6-1000P-201ENST00000391066 DNAJC13O75165 2243 aa-1.86□□□□□ -2.71
RNU6-1000P-201ENST00000391066 ACACAQ13085 2346 aa-1.86□□□□□ -2.71
RNU6-1000P-201ENST00000391066 LOC285095A0A1B0GVY8 99 aa-1.87□□□□□ -2.71
RNU6-1000P-201ENST00000391066 MYOM1P52179 1685 aa-1.87□□□□□ -2.71
RNU6-1000P-201ENST00000391066 CPSF1Q10570 1443 aaKnown RBP-1.88□□□□□ -2.71
RNU6-1000P-201ENST00000391066 LOC105371267A0A1B0GV96 52 aa-1.88□□□□□ -2.71
RNU6-1000P-201ENST00000391066 DEFB105AQ8NG35 78 aa-1.88□□□□□ -2.71
RNU6-1000P-201ENST00000391066 PAIP2BQ9ULR5 123 aaKnown RBP-1.88□□□□□ -2.71
RNU6-1000P-201ENST00000391066 PSME4Q14997 1843 aa-1.89□□□□□ -2.71
RNU6-1000P-201ENST00000391066 TRBV7-4A0A0J9YYF1 115 aa-1.89□□□□□ -2.71
RNU6-1000P-201ENST00000391066 LYSTQ99698 3801 aa-1.89□□□□□ -2.71
RNU6-1000P-201ENST00000391066 NAA60Q9H7X0 242 aa-1.89□□□□□ -2.71
RNU6-1000P-201ENST00000391066 TMEM263Q8WUH6 116 aaKnown RBP-1.9□□□□□ -2.71
RNU6-1000P-201ENST00000391066 PPP3R2Q96LZ3 170 aa-1.9□□□□□ -2.71
RNU6-1000P-201ENST00000391066 SPANXDQ9BXN6 97 aa-1.9□□□□□ -2.71
RNU6-1000P-201ENST00000391066 BTAF1O14981 1849 aa-1.91□□□□□ -2.71
RNU6-1000P-201ENST00000391066 A0A0C4DFX4 3053 aa-1.91□□□□□ -2.71
RNU6-1000P-201ENST00000391066 SRCAPQ6ZRS2 3230 aa-1.91□□□□□ -2.72
RNU6-1000P-201ENST00000391066 MGPP08493 103 aa-1.91□□□□□ -2.72
RNU6-1000P-201ENST00000391066 MRPL54Q6P161 138 aaKnown RBP-1.92□□□□□ -2.72
RNU6-1000P-201ENST00000391066 KIAA0556O60303 1618 aa-1.92□□□□□ -2.72
RNU6-1000P-201ENST00000391066 ARHGEF5Q12774 1597 aa-1.93□□□□□ -2.72
RNU6-1000P-201ENST00000391066 PHLPP1O60346 1717 aa-1.93□□□□□ -2.72
RNU6-1000P-201ENST00000391066 MEIG1Q5JSS6 88 aa-1.93□□□□□ -2.72
RNU6-1000P-201ENST00000391066 SHROOM2Q13796 1616 aa-1.93□□□□□ -2.72
RNU6-1000P-201ENST00000391066 ZFHX3Q15911 3703 aa-1.93□□□□□ -2.72
RNU6-1000P-201ENST00000391066 LINC00959A0A1B0GUT2 108 aa-1.94□□□□□ -2.72
RNU6-1000P-201ENST00000391066 MIF4GDA9UHW6 222 aaKnown RBP-1.94□□□□□ -2.72
RNU6-1000P-201ENST00000391066 C10orf113Q5VZT2 155 aa-1.94□□□□□ -2.72
RNU6-1000P-201ENST00000391066 ARL11Q969Q4 196 aa-1.94□□□□□ -2.72
RNU6-1000P-201ENST00000391066 SPRR4Q96PI1 79 aa-1.94□□□□□ -2.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms