RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 TAL2Q16559 108 aa11.92□□□□□ -0.5
THUMPD2-201ENST00000378727 LYPD5Q6UWN5 251 aa11.92□□□□□ -0.5
THUMPD2-201ENST00000378727 CEND1Q8N111 149 aa11.92□□□□□ -0.5
THUMPD2-201ENST00000378727 HUWE1Q7Z6Z7 4374 aaKnown RBP11.92□□□□□ -0.5
THUMPD2-201ENST00000378727 DEFB131BA0A096LNP1 70 aa11.91□□□□□ -0.5
THUMPD2-201ENST00000378727 IGLV5-39A0A0G2JS06 123 aa11.91□□□□□ -0.5
THUMPD2-201ENST00000378727 SMIM1B2RUZ4 78 aa11.91□□□□□ -0.5
THUMPD2-201ENST00000378727 Q6ZVH6 145 aa11.91□□□□□ -0.5
THUMPD2-201ENST00000378727 C10orf126Q8N4M7 172 aa11.91□□□□□ -0.5
THUMPD2-201ENST00000378727 HIST1H4GQ99525 98 aa11.91□□□□□ -0.5
THUMPD2-201ENST00000378727 TM2D2Q9BX73 214 aa11.91□□□□□ -0.5
THUMPD2-201ENST00000378727 LINC00959A0A1B0GUT2 108 aa11.91□□□□□ -0.5
THUMPD2-201ENST00000378727 LURAP1LQ8IV03 231 aa11.91□□□□□ -0.5
THUMPD2-201ENST00000378727 TAX1BP3O14907 124 aa11.89□□□□□ -0.51
THUMPD2-201ENST00000378727 ZFAND6Q6FIF0 208 aa11.89□□□□□ -0.51
THUMPD2-201ENST00000378727 CLPSL2Q6UWE3 100 aa11.89□□□□□ -0.51
THUMPD2-201ENST00000378727 NDUFA12Q9UI09 145 aa11.89□□□□□ -0.51
THUMPD2-201ENST00000378727 IGHV3OR16-9A0A0B4J2B5 98 aa11.88□□□□□ -0.51
THUMPD2-201ENST00000378727 A0A0J9YXY3 114 aa11.88□□□□□ -0.51
THUMPD2-201ENST00000378727 A6NDN8 102 aa11.87□□□□□ -0.51
THUMPD2-201ENST00000378727 LINC00269Q8N2A0 174 aa11.87□□□□□ -0.51
THUMPD2-201ENST00000378727 SPANXB1Q9NS25 103 aaPredicted RBP11.87□□□□□ -0.51
THUMPD2-201ENST00000378727 ANGP03950 147 aaKnown RBP11.86□□□□□ -0.51
THUMPD2-201ENST00000378727 SRSF9Q13242 221 aaKnown RBP eCLIP11.86□□□□□ -0.51
THUMPD2-201ENST00000378727 PTTG1IPP53801 180 aa11.85□□□□□ -0.51
THUMPD2-201ENST00000378727 SS18Q15532 418 aa11.85□□□□□ -0.51
THUMPD2-201ENST00000378727 COX11Q9Y6N1 276 aa11.85□□□□□ -0.51
THUMPD2-201ENST00000378727 NDUFA1O15239 70 aa11.84□□□□□ -0.51
THUMPD2-201ENST00000378727 CCL25O15444 150 aa11.84□□□□□ -0.51
THUMPD2-201ENST00000378727 REG3AQ06141 175 aa11.84□□□□□ -0.51
THUMPD2-201ENST00000378727 LITAFQ99732 161 aa11.84□□□□□ -0.51
THUMPD2-201ENST00000378727 A0A087WZ39 114 aa11.83□□□□□ -0.51
THUMPD2-201ENST00000378727 TRAV10A0A0B4J240 114 aa11.83□□□□□ -0.51
THUMPD2-201ENST00000378727 IGHV3-30P01768 117 aa11.83□□□□□ -0.51
THUMPD2-201ENST00000378727 IGHV3-30-5P0DP03 117 aa11.83□□□□□ -0.51
THUMPD2-201ENST00000378727 XCL1P47992 114 aa11.83□□□□□ -0.51
THUMPD2-201ENST00000378727 ESRGQ1W209 222 aa11.83□□□□□ -0.51
THUMPD2-201ENST00000378727 C5orf38Q86SI9 138 aa11.83□□□□□ -0.52
THUMPD2-201ENST00000378727 K7ERJ3 54 aa11.82□□□□□ -0.52
THUMPD2-201ENST00000378727 WFDC10BQ8IUB3 73 aa11.82□□□□□ -0.52
THUMPD2-201ENST00000378727 NHP2Q9NX24 153 aaKnown RBP11.82□□□□□ -0.52
THUMPD2-201ENST00000378727 COL7A1Q02388 2944 aa11.82□□□□□ -0.52
THUMPD2-201ENST00000378727 Q9H8V8 135 aa11.82□□□□□ -0.52
THUMPD2-201ENST00000378727 ZNF625Q96I27 306 aaPredicted RBP11.81□□□□□ -0.52
THUMPD2-201ENST00000378727 B9D2Q9BPU9 175 aa11.81□□□□□ -0.52
THUMPD2-201ENST00000378727 TMEM238C9JI98 176 aa11.8□□□□□ -0.52
THUMPD2-201ENST00000378727 ADAMTSL4-AS1Q5T5F5 129 aa11.8□□□□□ -0.52
THUMPD2-201ENST00000378727 DNAH9Q9NYC9 4486 aa11.8□□□□□ -0.52
THUMPD2-201ENST00000378727 SMIM13P0DJ93 91 aa11.8□□□□□ -0.52
THUMPD2-201ENST00000378727 CHCHD10Q8WYQ3 142 aaPredicted RBP11.8□□□□□ -0.52
THUMPD2-201ENST00000378727 RAB37Q96AX2 223 aa11.8□□□□□ -0.52
THUMPD2-201ENST00000378727 PRR34Q9NV39 138 aa11.8□□□□□ -0.52
THUMPD2-201ENST00000378727 KLK12Q9UKR0 248 aa11.8□□□□□ -0.52
THUMPD2-201ENST00000378727 IGLV10-54A0A075B6I4 117 aa11.79□□□□□ -0.52
THUMPD2-201ENST00000378727 IGHV3-33P01772 117 aa11.79□□□□□ -0.52
THUMPD2-201ENST00000378727 COX7B2Q8TF08 81 aa11.79□□□□□ -0.52
THUMPD2-201ENST00000378727 A0A1B0GWB2 263 aa11.78□□□□□ -0.52
THUMPD2-201ENST00000378727 CD164L2Q6UWJ8 174 aa11.78□□□□□ -0.52
THUMPD2-201ENST00000378727 ENHOQ6UWT2 76 aa11.77□□□□□ -0.52
THUMPD2-201ENST00000378727 C9orf118A6NHY6 69 aa11.77□□□□□ -0.53
THUMPD2-201ENST00000378727 TOMM7Q9P0U1 55 aa11.77□□□□□ -0.53
THUMPD2-201ENST00000378727 TIMM17BO60830 172 aa11.76□□□□□ -0.53
THUMPD2-201ENST00000378727 MUSTN1Q8IVN3 82 aa11.76□□□□□ -0.53
THUMPD2-201ENST00000378727 SPANXDQ9BXN6 97 aa11.76□□□□□ -0.53
THUMPD2-201ENST00000378727 SPANXCQ9NY87 97 aa11.76□□□□□ -0.53
THUMPD2-201ENST00000378727 DNHD1Q96M86 4753 aa11.76□□□□□ -0.53
THUMPD2-201ENST00000378727 C15orf53Q8NAA6 179 aa11.75□□□□□ -0.53
THUMPD2-201ENST00000378727 NAA38Q9BRA0 125 aaKnown RBP11.75□□□□□ -0.53
THUMPD2-201ENST00000378727 STAB2Q8WWQ8 2551 aa11.75□□□□□ -0.53
THUMPD2-201ENST00000378727 TMEM238LA0A1B0GVL6 79 aa11.75□□□□□ -0.53
THUMPD2-201ENST00000378727 A6NJY4 79 aa11.75□□□□□ -0.53
THUMPD2-201ENST00000378727 LINC01561Q8N1V8 128 aa11.75□□□□□ -0.53
THUMPD2-201ENST00000378727 FOXI1Q12951 378 aa11.74□□□□□ -0.53
THUMPD2-201ENST00000378727 MIAQ16674 131 aa11.74□□□□□ -0.53
THUMPD2-201ENST00000378727 H3BUT2 72 aa11.74□□□□□ -0.53
THUMPD2-201ENST00000378727 HERV-K104P63124 156 aa11.74□□□□□ -0.53
THUMPD2-201ENST00000378727 DAND5Q8N907 189 aa11.74□□□□□ -0.53
THUMPD2-201ENST00000378727 COX7A2LO14548 114 aa11.73□□□□□ -0.53
THUMPD2-201ENST00000378727 A4D1N5 150 aa11.72□□□□□ -0.53
THUMPD2-201ENST00000378727 PRSS2P07478 247 aa11.72□□□□□ -0.53
THUMPD2-201ENST00000378727 EIF4EBP3O60516 100 aaPredicted RBP11.72□□□□□ -0.53
THUMPD2-201ENST00000378727 UBE2WQ96B02 151 aa11.72□□□□□ -0.53
THUMPD2-201ENST00000378727 GAGE12HA6NDE8 117 aa11.71□□□□□ -0.53
THUMPD2-201ENST00000378727 IGLL5B9A064 214 aa11.71□□□□□ -0.53
THUMPD2-201ENST00000378727 CFC1BP0CG36 223 aa11.71□□□□□ -0.53
THUMPD2-201ENST00000378727 CFC1P0CG37 223 aa11.71□□□□□ -0.53
THUMPD2-201ENST00000378727 RPL24P83731 157 aaKnown RBP11.71□□□□□ -0.53
THUMPD2-201ENST00000378727 CIRBPQ14011 172 aaKnown RBP11.71□□□□□ -0.53
THUMPD2-201ENST00000378727 A0A0U1RRA0 63 aa11.71□□□□□ -0.54
THUMPD2-201ENST00000378727 APOMO95445 188 aa11.71□□□□□ -0.54
THUMPD2-201ENST00000378727 NPC2P61916 151 aa11.71□□□□□ -0.54
THUMPD2-201ENST00000378727 VAMP3Q15836 100 aa11.71□□□□□ -0.54
THUMPD2-201ENST00000378727 LINC01556Q5JQF7 62 aa11.71□□□□□ -0.54
THUMPD2-201ENST00000378727 Q8IZM0 81 aa11.71□□□□□ -0.54
THUMPD2-201ENST00000378727 CRPP02741 224 aa11.7□□□□□ -0.54
THUMPD2-201ENST00000378727 MEIG1Q5JSS6 88 aa11.7□□□□□ -0.54
THUMPD2-201ENST00000378727 LINC00588Q9Y4M8 146 aa11.7□□□□□ -0.54
THUMPD2-201ENST00000378727 KIAA0087Q14695 138 aa11.69□□□□□ -0.54
THUMPD2-201ENST00000378727 C6orf226Q5I0X4 101 aa11.69□□□□□ -0.54
THUMPD2-201ENST00000378727 TRAV8-4A0A0B4J246 113 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms