RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 FAM19A1Q7Z5A9 133 aa10.93□□□□□ -0.66
LMNA-201ENST00000347559 RNASE1P07998 156 aaKnown RBP10.92□□□□□ -0.66
LMNA-201ENST00000347559 TMEM243Q9BU79 118 aa10.92□□□□□ -0.66
LMNA-201ENST00000347559 H0YGX0 51 aa10.92□□□□□ -0.66
LMNA-201ENST00000347559 PSMB8P28062 276 aa10.92□□□□□ -0.66
LMNA-201ENST00000347559 ENHOQ6UWT2 76 aa10.91□□□□□ -0.66
LMNA-201ENST00000347559 IGHV4-61A0A0C4DH41 118 aa10.91□□□□□ -0.66
LMNA-201ENST00000347559 CCL18P55774 89 aa10.91□□□□□ -0.66
LMNA-201ENST00000347559 NTM-AS1Q6ZSK4 140 aa10.91□□□□□ -0.66
LMNA-201ENST00000347559 C11orf68Q9H3H3 251 aaKnown RBP10.91□□□□□ -0.66
LMNA-201ENST00000347559 VPS13CQ709C8 3753 aa10.91□□□□□ -0.66
LMNA-201ENST00000347559 TRGV1A0A0A0MS02 117 aa10.91□□□□□ -0.66
LMNA-201ENST00000347559 COX7B2Q8TF08 81 aa10.91□□□□□ -0.66
LMNA-201ENST00000347559 CDC42SE2Q9NRR3 84 aa10.9□□□□□ -0.66
LMNA-201ENST00000347559 UBE2L6O14933 153 aa10.89□□□□□ -0.67
LMNA-201ENST00000347559 OBSCN-AS1Q96MR7 158 aa10.89□□□□□ -0.67
LMNA-201ENST00000347559 ORMDL1Q9P0S3 153 aa10.89□□□□□ -0.67
LMNA-201ENST00000347559 C11orf72Q8NBR9 251 aa10.89□□□□□ -0.67
LMNA-201ENST00000347559 XCL2Q9UBD3 114 aa10.89□□□□□ -0.67
LMNA-201ENST00000347559 DEFB136Q30KP8 78 aa10.88□□□□□ -0.67
LMNA-201ENST00000347559 UBE2E2Q96LR5 201 aa10.88□□□□□ -0.67
LMNA-201ENST00000347559 CCKP06307 115 aa10.87□□□□□ -0.67
LMNA-201ENST00000347559 CSMD2Q7Z408 3487 aa10.87□□□□□ -0.67
LMNA-201ENST00000347559 IGHV4-59P01825 116 aa10.87□□□□□ -0.67
LMNA-201ENST00000347559 WNK1Q9H4A3 2382 aa10.85□□□□□ -0.67
LMNA-201ENST00000347559 SLURP1P55000 103 aa10.85□□□□□ -0.67
LMNA-201ENST00000347559 FAM236DA0A1B0GTK5 79 aa10.85□□□□□ -0.67
LMNA-201ENST00000347559 TMEM89A2RUT3 159 aa10.85□□□□□ -0.67
LMNA-201ENST00000347559 FAM236CP0DP71 79 aa10.85□□□□□ -0.67
LMNA-201ENST00000347559 KHDC1LQ5JSQ8 128 aa10.85□□□□□ -0.67
LMNA-201ENST00000347559 NDUFC2O95298 119 aa10.84□□□□□ -0.67
LMNA-201ENST00000347559 SS18Q15532 418 aa10.84□□□□□ -0.67
LMNA-201ENST00000347559 K7ENP7 123 aa10.84□□□□□ -0.67
LMNA-201ENST00000347559 XCL1P47992 114 aa10.84□□□□□ -0.67
LMNA-201ENST00000347559 FAM19A3Q7Z5A8 133 aa10.83□□□□□ -0.68
LMNA-201ENST00000347559 MYO9AB2RTY4 2548 aa10.83□□□□□ -0.68
LMNA-201ENST00000347559 K7EQD1 137 aa10.83□□□□□ -0.68
LMNA-201ENST00000347559 AVPP01185 164 aa10.83□□□□□ -0.68
LMNA-201ENST00000347559 INSP01308 110 aa10.83□□□□□ -0.68
LMNA-201ENST00000347559 S100A7L2Q5SY68 101 aa10.83□□□□□ -0.68
LMNA-201ENST00000347559 Q6ZTI0 123 aa10.82□□□□□ -0.68
LMNA-201ENST00000347559 C18orf65Q6ZTR6 163 aa10.82□□□□□ -0.68
LMNA-201ENST00000347559 PRR3P79522 188 aaKnown RBP10.81□□□□□ -0.68
LMNA-201ENST00000347559 UBL5Q9BZL1 73 aa10.81□□□□□ -0.68
LMNA-201ENST00000347559 USP9YO00507 2555 aaPredicted RBP10.81□□□□□ -0.68
LMNA-201ENST00000347559 LINC00336Q6ZUF6 198 aa10.8□□□□□ -0.68
LMNA-201ENST00000347559 LOC100131303A0A0U1RQF7 123 aa10.8□□□□□ -0.68
LMNA-201ENST00000347559 MAP6D1Q9H9H5 199 aa10.8□□□□□ -0.68
LMNA-201ENST00000347559 SNURFQ9Y675 71 aa10.8□□□□□ -0.68
LMNA-201ENST00000347559 DEFB112Q30KQ8 113 aa10.79□□□□□ -0.68
LMNA-201ENST00000347559 C1orf43Q9BWL3 253 aa10.79□□□□□ -0.68
LMNA-201ENST00000347559 JMJD1CQ15652 2540 aa10.79□□□□□ -0.68
LMNA-201ENST00000347559 NDUFC2-KCTD14E9PQ53 114 aa10.78□□□□□ -0.68
LMNA-201ENST00000347559 MRAPQ8TCY5 172 aa10.78□□□□□ -0.68
LMNA-201ENST00000347559 CELSR2Q9HCU4 2923 aa10.78□□□□□ -0.68
LMNA-201ENST00000347559 JMJD7-PLA2G4BH0Y9G9 81 aa10.78□□□□□ -0.68
LMNA-201ENST00000347559 C6orf226Q5I0X4 101 aa10.78□□□□□ -0.68
LMNA-201ENST00000347559 TRBV6-4A0A1B0GX49 114 aa10.78□□□□□ -0.68
LMNA-201ENST00000347559 IBA57-AS1B1ANH7 110 aa10.78□□□□□ -0.68
LMNA-201ENST00000347559 DYNLRB2Q8TF09 96 aa10.78□□□□□ -0.68
LMNA-201ENST00000347559 MUC6Q6W4X9 2439 aa10.78□□□□□ -0.68
LMNA-201ENST00000347559 IGLV4-60A0A075B6I1 120 aa10.77□□□□□ -0.69
LMNA-201ENST00000347559 NBL1P41271 181 aa10.77□□□□□ -0.69
LMNA-201ENST00000347559 MSMBP08118 114 aa10.77□□□□□ -0.69
LMNA-201ENST00000347559 IGHV4-30-2A0A087WSY4 118 aa10.76□□□□□ -0.69
LMNA-201ENST00000347559 HAMPP81172 84 aa10.76□□□□□ -0.69
LMNA-201ENST00000347559 ATP5EP2Q5VTU8 51 aa10.76□□□□□ -0.69
LMNA-201ENST00000347559 PKIGQ9Y2B9 76 aa10.76□□□□□ -0.69
LMNA-201ENST00000347559 C19orf84I3L1E1 186 aa10.75□□□□□ -0.69
LMNA-201ENST00000347559 WFDC11Q8NEX6 87 aa10.75□□□□□ -0.69
LMNA-201ENST00000347559 NOP10Q9NPE3 64 aaKnown RBP10.75□□□□□ -0.69
LMNA-201ENST00000347559 TRBV10-1A0A0K0K1A3 114 aa10.75□□□□□ -0.69
LMNA-201ENST00000347559 H7BZZ5 65 aa10.75□□□□□ -0.69
LMNA-201ENST00000347559 TLN2Q9Y4G6 2542 aa10.75□□□□□ -0.69
LMNA-201ENST00000347559 Q8N814 137 aa10.75□□□□□ -0.69
LMNA-201ENST00000347559 SERP1Q9Y6X1 66 aa10.75□□□□□ -0.69
LMNA-201ENST00000347559 RMI2Q96E14 147 aa10.74□□□□□ -0.69
LMNA-201ENST00000347559 A8MTW9 85 aa10.74□□□□□ -0.69
LMNA-201ENST00000347559 TMEM256-PLSCR3K7ERE1 68 aa10.74□□□□□ -0.69
LMNA-201ENST00000347559 C1orf158Q8N1D5 194 aa10.73□□□□□ -0.69
LMNA-201ENST00000347559 TMEM86BQ8N661 226 aa10.73□□□□□ -0.69
LMNA-201ENST00000347559 TRGV2A0A075B6R0 118 aa10.73□□□□□ -0.69
LMNA-201ENST00000347559 IGHV3OR16-9A0A0B4J2B5 98 aa10.73□□□□□ -0.69
LMNA-201ENST00000347559 PRO0628Q9UI54 55 aa10.73□□□□□ -0.69
LMNA-201ENST00000347559 USP9XQ93008 2570 aaPredicted RBP10.73□□□□□ -0.69
LMNA-201ENST00000347559 ZANQ9Y493 2812 aa10.72□□□□□ -0.69
LMNA-201ENST00000347559 STHQ8IWL8 128 aa10.72□□□□□ -0.69
LMNA-201ENST00000347559 TRAV10A0A0B4J240 114 aa10.71□□□□□ -0.69
LMNA-201ENST00000347559 UCNP55089 124 aa10.71□□□□□ -0.69
LMNA-201ENST00000347559 NCOR2Q9Y618 2525 aa10.71□□□□□ -0.69
LMNA-201ENST00000347559 F8WEM9 126 aa10.71□□□□□ -0.69
LMNA-201ENST00000347559 A0A096LNT2 108 aa10.71□□□□□ -0.7
LMNA-201ENST00000347559 J3QLI3 93 aa10.71□□□□□ -0.7
LMNA-201ENST00000347559 RPL35AP18077 110 aaKnown RBP10.71□□□□□ -0.7
LMNA-201ENST00000347559 LAMTOR3Q9UHA4 124 aa10.71□□□□□ -0.7
LMNA-201ENST00000347559 SETD2Q9BYW2 2564 aaPredicted RBP10.7□□□□□ -0.7
LMNA-201ENST00000347559 TRAV7A0A075B6U4 112 aa10.7□□□□□ -0.7
LMNA-201ENST00000347559 CLPSL2Q6UWE3 100 aa10.7□□□□□ -0.7
LMNA-201ENST00000347559 M0R2N4 97 aa10.7□□□□□ -0.7
LMNA-201ENST00000347559 CCL19Q99731 98 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms