RNA–Protein interactions for RNA: ENST00000334348.7

UPK3B-202, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 2,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-202ENST00000334348 KLK5Q9Y337 293 aaPredicted RBP11.65□□□□□ -0.54
UPK3B-202ENST00000334348 CSDC2Q9Y534 153 aaKnown RBP11.65□□□□□ -0.54
UPK3B-202ENST00000334348 J3KT08 172 aa11.65□□□□□ -0.54
UPK3B-202ENST00000334348 OTOGQ6ZRI0 2925 aa11.65□□□□□ -0.54
UPK3B-202ENST00000334348 LOC107984640A0A0U1RRK4 108 aa11.64□□□□□ -0.55
UPK3B-202ENST00000334348 Q9HAA7 133 aa11.64□□□□□ -0.55
UPK3B-202ENST00000334348 F5H768 121 aa11.64□□□□□ -0.55
UPK3B-202ENST00000334348 HOXD3P31249 432 aaPredicted RBP11.64□□□□□ -0.55
UPK3B-202ENST00000334348 C10orf105Q8TEF2 133 aa11.64□□□□□ -0.55
UPK3B-202ENST00000334348 OVOL2Q9BRP0 275 aa11.63□□□□□ -0.55
UPK3B-202ENST00000334348 TRAV13-1A0A0B4J241 112 aa11.63□□□□□ -0.55
UPK3B-202ENST00000334348 MSMBP08118 114 aa11.62□□□□□ -0.55
UPK3B-202ENST00000334348 RPS28P62857 69 aaKnown RBP11.62□□□□□ -0.55
UPK3B-202ENST00000334348 CRPP02741 224 aa11.61□□□□□ -0.55
UPK3B-202ENST00000334348 MYO9AB2RTY4 2548 aa11.6□□□□□ -0.55
UPK3B-202ENST00000334348 DNAL4O96015 105 aa11.6□□□□□ -0.55
UPK3B-202ENST00000334348 AVPP01185 164 aa11.6□□□□□ -0.55
UPK3B-202ENST00000334348 IGHV4-59P01825 116 aa11.6□□□□□ -0.55
UPK3B-202ENST00000334348 RPL18AQ02543 176 aaKnown RBP11.6□□□□□ -0.55
UPK3B-202ENST00000334348 SORL1Q92673 2214 aa11.6□□□□□ -0.55
UPK3B-202ENST00000334348 ITPR3Q14573 2671 aa11.6□□□□□ -0.55
UPK3B-202ENST00000334348 CCL19Q99731 98 aa11.6□□□□□ -0.55
UPK3B-202ENST00000334348 LINC00337Q8N6G1 96 aa11.59□□□□□ -0.55
UPK3B-202ENST00000334348 CDC42SE2Q9NRR3 84 aa11.59□□□□□ -0.55
UPK3B-202ENST00000334348 hADV29S1A0JD25 119 aa11.59□□□□□ -0.55
UPK3B-202ENST00000334348 FAM19A5Q7Z5A7 132 aaPredicted RBP11.59□□□□□ -0.55
UPK3B-202ENST00000334348 OBSCN-AS1Q96MR7 158 aa11.59□□□□□ -0.55
UPK3B-202ENST00000334348 IGKV2-28A0A075B6P5 120 aa11.58□□□□□ -0.56
UPK3B-202ENST00000334348 IGKV2D-28P01615 120 aa11.58□□□□□ -0.56
UPK3B-202ENST00000334348 Q6JHZ5 121 aa11.58□□□□□ -0.56
UPK3B-202ENST00000334348 UBE2E2Q96LR5 201 aa11.58□□□□□ -0.56
UPK3B-202ENST00000334348 NTM-AS1Q6ZSK4 140 aa11.57□□□□□ -0.56
UPK3B-202ENST00000334348 Q96MF0 132 aa11.57□□□□□ -0.56
UPK3B-202ENST00000334348 C5orf47Q569G3 176 aa11.57□□□□□ -0.56
UPK3B-202ENST00000334348 IGHV4-30-2A0A087WSY4 118 aa11.56□□□□□ -0.56
UPK3B-202ENST00000334348 A0A087WYN8 130 aa11.56□□□□□ -0.56
UPK3B-202ENST00000334348 INSP01308 110 aa11.56□□□□□ -0.56
UPK3B-202ENST00000334348 DEFB112Q30KQ8 113 aa11.56□□□□□ -0.56
UPK3B-202ENST00000334348 C9orf129Q5T035 196 aaKnown RBP11.56□□□□□ -0.56
UPK3B-202ENST00000334348 SND1-IT1Q9HBX3 110 aa11.56□□□□□ -0.56
UPK3B-202ENST00000334348 C14orf132Q9NPU4 83 aa11.56□□□□□ -0.56
UPK3B-202ENST00000334348 H0YGX0 51 aa11.56□□□□□ -0.56
UPK3B-202ENST00000334348 RPL36AP83881 106 aaKnown RBP11.56□□□□□ -0.56
UPK3B-202ENST00000334348 MIR7-3HGQ8N6C7 128 aa11.56□□□□□ -0.56
UPK3B-202ENST00000334348 SMIM11BQ8TCY0 68 aa11.56□□□□□ -0.56
UPK3B-202ENST00000334348 RPL36ALQ969Q0 106 aaKnown RBP11.56□□□□□ -0.56
UPK3B-202ENST00000334348 FLNAP21333 2647 aaKnown RBP11.55□□□□□ -0.56
UPK3B-202ENST00000334348 SMIM9A6NGZ8 99 aa11.55□□□□□ -0.56
UPK3B-202ENST00000334348 MAST4O15021 2626 aa11.55□□□□□ -0.56
UPK3B-202ENST00000334348 TRBV10-1A0A0K0K1A3 114 aa11.55□□□□□ -0.56
UPK3B-202ENST00000334348 LINC00846Q9NV44 126 aa11.55□□□□□ -0.56
UPK3B-202ENST00000334348 ACANP16112 2415 aa11.55□□□□□ -0.56
UPK3B-202ENST00000334348 IGKV3D-7A0A0C4DH55 119 aa11.54□□□□□ -0.56
UPK3B-202ENST00000334348 CYSRT1A8MQ03 144 aa11.54□□□□□ -0.56
UPK3B-202ENST00000334348 SERP2Q8N6R1 65 aa11.54□□□□□ -0.56
UPK3B-202ENST00000334348 CYSTM1Q9H1C7 97 aa11.54□□□□□ -0.56
UPK3B-202ENST00000334348 MAP6D1Q9H9H5 199 aa11.54□□□□□ -0.56
UPK3B-202ENST00000334348 B4DSR2 109 aa11.53□□□□□ -0.56
UPK3B-202ENST00000334348 SLURP1P55000 103 aa11.53□□□□□ -0.56
UPK3B-202ENST00000334348 COX7B2Q8TF08 81 aa11.53□□□□□ -0.56
UPK3B-202ENST00000334348 K7EQD1 137 aa11.53□□□□□ -0.56
UPK3B-202ENST00000334348 TMEM258P61165 79 aa11.53□□□□□ -0.56
UPK3B-202ENST00000334348 UPK3BQ9BT76 320 aa11.53□□□□□ -0.56
UPK3B-202ENST00000334348 TLN2Q9Y4G6 2542 aa11.52□□□□□ -0.56
UPK3B-202ENST00000334348 ATP5J2P56134 94 aa11.52□□□□□ -0.57
UPK3B-202ENST00000334348 IL17DQ8TAD2 202 aa11.52□□□□□ -0.57
UPK3B-202ENST00000334348 TRGV1A0A0A0MS02 117 aa11.51□□□□□ -0.57
UPK3B-202ENST00000334348 OR13C6PQ8NH95 151 aa11.51□□□□□ -0.57
UPK3B-202ENST00000334348 CUBNO60494 3623 aa11.51□□□□□ -0.57
UPK3B-202ENST00000334348 LINC01561Q8N1V8 128 aa11.5□□□□□ -0.57
UPK3B-202ENST00000334348 CREBBPQ92793 2442 aa11.5□□□□□ -0.57
UPK3B-202ENST00000334348 CCL18P55774 89 aa11.49□□□□□ -0.57
UPK3B-202ENST00000334348 DPH3Q96FX2 82 aa11.49□□□□□ -0.57
UPK3B-202ENST00000334348 UBE2L6O14933 153 aa11.49□□□□□ -0.57
UPK3B-202ENST00000334348 LECT2O14960 151 aa11.49□□□□□ -0.57
UPK3B-202ENST00000334348 LINC00158P58513 81 aa11.49□□□□□ -0.57
UPK3B-202ENST00000334348 DEFB136Q30KP8 78 aa11.49□□□□□ -0.57
UPK3B-202ENST00000334348 TMEM243Q9BU79 118 aa11.49□□□□□ -0.57
UPK3B-202ENST00000334348 CSPG4Q6UVK1 2322 aa11.49□□□□□ -0.57
UPK3B-202ENST00000334348 A0A087WVE0 104 aa11.48□□□□□ -0.57
UPK3B-202ENST00000334348 USP17L23D6RBM5 183 aa11.48□□□□□ -0.57
UPK3B-202ENST00000334348 C18orf65Q6ZTR6 163 aa11.48□□□□□ -0.57
UPK3B-202ENST00000334348 ZNF702PQ9H963 129 aa11.48□□□□□ -0.57
UPK3B-202ENST00000334348 XCL2Q9UBD3 114 aa11.48□□□□□ -0.57
UPK3B-202ENST00000334348 NCR3O14931 201 aa11.47□□□□□ -0.57
UPK3B-202ENST00000334348 TOMM7Q9P0U1 55 aa11.47□□□□□ -0.57
UPK3B-202ENST00000334348 HIVEP1P15822 2718 aa11.47□□□□□ -0.57
UPK3B-202ENST00000334348 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.47□□□□□ -0.57
UPK3B-202ENST00000334348 C1orf158Q8N1D5 194 aa11.47□□□□□ -0.57
UPK3B-202ENST00000334348 IBA57-AS1B1ANH7 110 aa11.46□□□□□ -0.57
UPK3B-202ENST00000334348 KIR2DL5BQ8NHK3 375 aa11.46□□□□□ -0.58
UPK3B-202ENST00000334348 DEFB113Q30KQ7 82 aa11.45□□□□□ -0.58
UPK3B-202ENST00000334348 DYNLRB2Q8TF09 96 aa11.45□□□□□ -0.58
UPK3B-202ENST00000334348 MXRA5Q9NR99 2828 aa11.45□□□□□ -0.58
UPK3B-202ENST00000334348 Q6ZTI0 123 aa11.45□□□□□ -0.58
UPK3B-202ENST00000334348 MAPK1IP1LQ8NDC0 245 aa11.45□□□□□ -0.58
UPK3B-202ENST00000334348 CCKP06307 115 aa11.44□□□□□ -0.58
UPK3B-202ENST00000334348 DEFB114Q30KQ6 69 aa11.44□□□□□ -0.58
UPK3B-202ENST00000334348 ORMDL1Q9P0S3 153 aa11.44□□□□□ -0.58
UPK3B-202ENST00000334348 SLPIP03973 132 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms